Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0936
         (618 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S82447-1|AAB37682.1|  125|Homo sapiens GCN5-like 1 protein.            92   1e-18
D64007-1|BAA10887.1|  125|Homo sapiens RT14 protein.                   92   1e-18
BC132795-1|AAI32796.1|  125|Homo sapiens biogenesis of lysosome-...    92   1e-18
BC130640-1|AAI30641.1|  125|Homo sapiens biogenesis of lysosome-...    92   1e-18

>S82447-1|AAB37682.1|  125|Homo sapiens GCN5-like 1 protein.
          Length = 125

 Score = 92.3 bits (219), Expect = 1e-18
 Identities = 44/68 (64%), Positives = 54/68 (79%)
 Frame = -3

Query: 457 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 278
           KEHQAKQ  ++ +QE++R+E ITAA  LT+ALVDHLNVGVAQAY+NQ+KLD E K L   
Sbjct: 7   KEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQ 66

Query: 277 AINFSKQT 254
           A  F+KQT
Sbjct: 67  AAQFAKQT 74



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = -2

Query: 296 KTFTPRCNKFFQTNQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYE-KA 120
           KT   +  +F +   QW+ +VENF+ ALKEIGDVENWARSIE DM+ I   LE  Y+ + 
Sbjct: 61  KTLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYKGQL 120

Query: 119 QEKPS 105
           Q  PS
Sbjct: 121 QSAPS 125


>D64007-1|BAA10887.1|  125|Homo sapiens RT14 protein.
          Length = 125

 Score = 92.3 bits (219), Expect = 1e-18
 Identities = 44/68 (64%), Positives = 54/68 (79%)
 Frame = -3

Query: 457 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 278
           KEHQAKQ  ++ +QE++R+E ITAA  LT+ALVDHLNVGVAQAY+NQ+KLD E K L   
Sbjct: 7   KEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQ 66

Query: 277 AINFSKQT 254
           A  F+KQT
Sbjct: 67  AAQFAKQT 74



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = -2

Query: 296 KTFTPRCNKFFQTNQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYE-KA 120
           KT   +  +F +   QW+ +VENF+ ALKEIGDVENWARSIE DM+ I   LE  Y+ + 
Sbjct: 61  KTLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYKGQL 120

Query: 119 QEKPS 105
           Q  PS
Sbjct: 121 QSAPS 125


>BC132795-1|AAI32796.1|  125|Homo sapiens biogenesis of
           lysosome-related organelles complex-1, subunit 1
           protein.
          Length = 125

 Score = 92.3 bits (219), Expect = 1e-18
 Identities = 44/68 (64%), Positives = 54/68 (79%)
 Frame = -3

Query: 457 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 278
           KEHQAKQ  ++ +QE++R+E ITAA  LT+ALVDHLNVGVAQAY+NQ+KLD E K L   
Sbjct: 7   KEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQ 66

Query: 277 AINFSKQT 254
           A  F+KQT
Sbjct: 67  AAQFAKQT 74



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = -2

Query: 296 KTFTPRCNKFFQTNQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYE-KA 120
           KT   +  +F +   QW+ +VENF+ ALKEIGDVENWARSIE DM+ I   LE  Y+ + 
Sbjct: 61  KTLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYKGQL 120

Query: 119 QEKPS 105
           Q  PS
Sbjct: 121 QSAPS 125


>BC130640-1|AAI30641.1|  125|Homo sapiens biogenesis of
           lysosome-related organelles complex-1, subunit 1
           protein.
          Length = 125

 Score = 92.3 bits (219), Expect = 1e-18
 Identities = 44/68 (64%), Positives = 54/68 (79%)
 Frame = -3

Query: 457 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 278
           KEHQAKQ  ++ +QE++R+E ITAA  LT+ALVDHLNVGVAQAY+NQ+KLD E K L   
Sbjct: 7   KEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQ 66

Query: 277 AINFSKQT 254
           A  F+KQT
Sbjct: 67  AAQFAKQT 74



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = -2

Query: 296 KTFTPRCNKFFQTNQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYE-KA 120
           KT   +  +F +   QW+ +VENF+ ALKEIGDVENWARSIE DM+ I   LE  Y+ + 
Sbjct: 61  KTLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYKGQL 120

Query: 119 QEKPS 105
           Q  PS
Sbjct: 121 QSAPS 125


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,363,219
Number of Sequences: 237096
Number of extensions: 1352748
Number of successful extensions: 2982
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2982
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)