Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0936
         (618 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g30330.1 68415.m03691 GCN5L1 family protein similar to GCN5-l...    50   2e-06
At2g17930.1 68415.m02076 FAT domain-containing protein / phospha...    33   0.20 
At5g13030.1 68418.m01494 expressed protein contains Pfam profile...    29   1.9  
At3g04980.1 68416.m00541 DNAJ heat shock N-terminal domain-conta...    29   1.9  
At4g36080.1 68417.m05136 FAT domain-containing protein / phospha...    28   4.3  

>At2g30330.1 68415.m03691 GCN5L1 family protein similar to GCN5-like
           protein 1 (RT14 protein) (Swiss-Prot:P78537) [Homo
           sapiens]
          Length = 152

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 22/52 (42%), Positives = 31/52 (59%)
 Frame = -2

Query: 272 KFFQTNQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYEKAQ 117
           KF +   QWL +    +SA+KEIGD ENW +++E D K IT  +   +E  Q
Sbjct: 101 KFGKQTDQWLAVTHAVNSAVKEIGDFENWMKTMEFDCKKITAAIRNIHEDQQ 152



 Score = 37.9 bits (84), Expect = 0.005
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = -3

Query: 415 EQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQGAINFSKQT 254
           E+ RKE I  A      LV  +N GV + ++N+K++++E + L      F KQT
Sbjct: 53  ERSRKEAIRHAARTADLLVKAVNGGVEECFVNEKRIESEIRNLAITVAKFGKQT 106


>At2g17930.1 68415.m02076 FAT domain-containing protein /
            phosphatidylinositol 3- and 4-kinase family protein
            contains Pfam profiles PF02259 FAT domain, PF00454
            Phosphatidylinositol 3- and 4-kinase, PF02260: FATC
            domain
          Length = 3795

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 290  FTPRC-NKFFQTNQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDT 144
            F P+  N   +    + T  EN   A++  G V +W R  +N+MK++TDT
Sbjct: 1890 FVPQMVNSLSRLGLPYNTTAENRRLAIELAGLVVSWERQRQNEMKMVTDT 1939


>At5g13030.1 68418.m01494 expressed protein contains Pfam profile
           PF02696: Uncharacterized ACR, YdiU/UPF0061 family
          Length = 633

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = -3

Query: 304 AEAKLLHQGAINFSKQTSNG*LLWKISAVLSKKLGMSKTGHEV 176
           A A+L++Q   N++ +      + +  A++SKKLG++K   EV
Sbjct: 442 AVAQLINQKEANYAMERYGDKFMDEYQAIMSKKLGLTKYNKEV 484


>At3g04980.1 68416.m00541 DNAJ heat shock N-terminal
           domain-containing protein contains Pfam profile PF00226
           DnaJ domain
          Length = 1165

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = -2

Query: 302 GSKTFTPRCNKFFQTNQ---QWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERA 132
           G+  F  +  + F   +   Q +T+ +  SSA+K+I  +++W   ++       DT+++ 
Sbjct: 8   GAHKFVTKAQRLFPNLENIVQMMTICDVHSSAIKKIKGLDDWYGVLQVQPYADADTIKKQ 67

Query: 131 YEK 123
           Y K
Sbjct: 68  YRK 70


>At4g36080.1 68417.m05136 FAT domain-containing protein /
            phosphatidylinositol 3- and 4-kinase family protein
            contains Pfam profiles PF00454: Phosphatidylinositol 3-
            and 4-kinase, PF02259: FAT domain, PF02260: FATC domain
          Length = 3839

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -2

Query: 290  FTPRC-NKFFQTNQQWLTLVENFSSALKEIGDVENWARSIENDMKIITD 147
            F P+  N   +    + T  EN   A++  G V +W R  +N+ K++TD
Sbjct: 1946 FVPQMVNSLSRLGLPYNTTAENRRLAIELAGLVVSWERQRQNESKMVTD 1994


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,383,007
Number of Sequences: 28952
Number of extensions: 200126
Number of successful extensions: 579
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)