Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0935
         (538 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029104-1|AAH29104.1|  792|Homo sapiens CPT1C protein protein.        31   3.4  
BC010084-1|AAH10084.1|  330|Homo sapiens family with sequence si...    31   3.4  
AK074389-1|BAB85068.1|  507|Homo sapiens actosyltransferase.  pr...    31   3.4  
AF357970-2|AAL99615.1|  803|Homo sapiens carnitine palmitoyltran...    31   3.4  
AF331918-1|AAQ14875.1|  803|Homo sapiens carnitine acyltransfera...    31   3.4  
AB208884-1|BAD92121.1|  400|Homo sapiens carnitine palmitoyltran...    31   3.4  

>BC029104-1|AAH29104.1|  792|Homo sapiens CPT1C protein protein.
          Length = 792

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +1

Query: 241 QNIFRHYRVASVLKDHIQYLHQVLHRAFYLVDR*FHSNLTS*HLSVKVPSKSVQPFQRL 417
           + IF   R+  V KD+I++LH   H A +   R F     S   S+  P    Q FQR+
Sbjct: 297 EKIFNTTRIPGVQKDYIRHLHDSQHVAVFHRGRFFRMGTHS-RNSLLSPRALEQQFQRI 354


>BC010084-1|AAH10084.1|  330|Homo sapiens family with sequence
           similarity 86, member A protein.
          Length = 330

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -1

Query: 367 VKMLDWNEIT--DLPNKRPDVILGADIVYDPSILKPLCNV 254
           V  LDW+  T   L   +PDV++ AD++Y P  +  L  V
Sbjct: 223 VAQLDWDVATVHQLSAFQPDVVIAADVLYCPEAIMSLVGV 262


>AK074389-1|BAB85068.1|  507|Homo sapiens actosyltransferase.
           protein.
          Length = 507

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +1

Query: 241 QNIFRHYRVASVLKDHIQYLHQVLHRAFYLVDR*FHSNLTS*HLSVKVPSKSVQPFQRL 417
           + IF   R+  V KD+I++LH   H A +   R F     S   S+  P    Q FQR+
Sbjct: 12  EKIFNTTRIPGVQKDYIRHLHDSQHVAVFHRGRFFRMGTHS-RNSLLSPRALEQQFQRI 69


>AF357970-2|AAL99615.1|  803|Homo sapiens carnitine
           palmitoyltransferase IC protein.
          Length = 803

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +1

Query: 241 QNIFRHYRVASVLKDHIQYLHQVLHRAFYLVDR*FHSNLTS*HLSVKVPSKSVQPFQRL 417
           + IF   R+  V KD+I++LH   H A +   R F     S   S+  P    Q FQR+
Sbjct: 308 EKIFNTTRIPGVQKDYIRHLHDSQHVAVFHRGRFFRMGTHS-RNSLLSPRALEQQFQRI 365


>AF331918-1|AAQ14875.1|  803|Homo sapiens carnitine
           acyltransferase-like protein 1 protein.
          Length = 803

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +1

Query: 241 QNIFRHYRVASVLKDHIQYLHQVLHRAFYLVDR*FHSNLTS*HLSVKVPSKSVQPFQRL 417
           + IF   R+  V KD+I++LH   H A +   R F     S   S+  P    Q FQR+
Sbjct: 308 EKIFNTTRIPGVQKDYIRHLHDSQHVAVFHRGRFFRMGTHS-RNSLLSPRALEQQFQRI 365


>AB208884-1|BAD92121.1|  400|Homo sapiens carnitine
           palmitoyltransferase 1C variant protein.
          Length = 400

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +1

Query: 241 QNIFRHYRVASVLKDHIQYLHQVLHRAFYLVDR*FHSNLTS*HLSVKVPSKSVQPFQRL 417
           + IF   R+  V KD+I++LH   H A +   R F     S   S+  P    Q FQR+
Sbjct: 94  EKIFNTTRIPGVQKDYIRHLHDSQHVAVFHRGRFFRMGTHS-RNSLLSPRALEQQFQRI 151


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,855,922
Number of Sequences: 237096
Number of extensions: 1350334
Number of successful extensions: 2118
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2118
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)