Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0930
         (668 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   1.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.0  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    22   4.6  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   4.6  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/43 (23%), Positives = 21/43 (48%)
 Frame = +1

Query: 445 HPSRPAERHRGGQRCNQETTVPQQLKKSEAKDGREMQESRNND 573
           H     E+ +    CNQ+T    QL + E+ + +E+ + +  +
Sbjct: 54  HQDHNKEKSKNNHHCNQDTEKLNQL-EIESDNSKEVNDKKEEN 95


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 490 NQETTVPQQLKKSEAKDGREMQESRNNDICGRC 588
           N ET + + ++K+E  + RE+      D+ G C
Sbjct: 157 NLETYLDKLIEKNEPIECRELTARFTTDVIGSC 189


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 370 RPQLDPRSGLARQ 408
           RP L+PR GLA Q
Sbjct: 169 RPPLNPRFGLAHQ 181


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 370 RPQLDPRSGLARQ 408
           RP L+PR GLA Q
Sbjct: 179 RPPLNPRFGLAHQ 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,435
Number of Sequences: 438
Number of extensions: 3893
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)