Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0929
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 116 2e-26
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 106 1e-23
11_01_0617 - 4939108-4939259,4939584-4940259 31 0.53
04_04_0028 - 22243272-22243577,22244564-22244713,22244919-222456... 29 2.8
03_01_0502 - 3779551-3779562,3779863-3780012,3780129-3780172,378... 29 2.8
11_06_0092 + 19973364-19975983,19976272-19976648 29 3.7
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 29 3.7
05_04_0061 + 17582368-17582606,17582716-17583090,17593677-17594265 29 3.7
02_05_1006 + 33448476-33448915,33449016-33449083,33449681-334497... 29 3.7
01_06_0813 - 32165310-32165546,32165691-32165783,32166075-321662... 29 3.7
02_01_0299 + 2001938-2002510,2002821-2003033,2003129-2003333,200... 28 4.9
12_02_0881 - 23970143-23970433,23970814-23971116,23971490-239720... 28 6.5
07_03_0537 - 19218461-19218982,19219482-19219868,19219993-192201... 28 6.5
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 28 6.5
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300... 27 8.6
11_06_0690 + 26303733-26306540 27 8.6
09_04_0676 - 19383757-19383890,19384308-19384415,19384493-193846... 27 8.6
03_06_0108 + 31708713-31709079,31709258-31709822,31709933-317100... 27 8.6
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 27 8.6
02_04_0098 + 19701999-19702185,19703698-19704551,19704732-197048... 27 8.6
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 27 8.6
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 116 bits (278), Expect = 2e-26
Identities = 55/96 (57%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINV 435
QVYEET+G+ V DPVLRT KPLSVELGPGILG+IFDGIQRPLK I + +YIP+G++V
Sbjct: 104 QVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVSV 163
Query: 436 PSLAREVDWEFNPLNVKVGSHIT-GEICMVLYTRTL 540
P+L ++ W+F P + VG IT G++ ++ TL
Sbjct: 164 PALDKDQLWDFEPKKLGVGDAITGGDLYATVFENTL 199
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +2
Query: 113 RFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMAT 253
R G V AVSGPVV A+ M G+AMYELVRVG + L+GEIIRLEGD AT
Sbjct: 56 RIGGVLAVSGPVVVADGMGGAAMYELVRVGNDNLIGEIIRLEGDSAT 102
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 510 DLYGIVHENTLVKHRMLVPPKAKGTVTYI 596
DLY V ENTL+KH + +PP + G ++YI
Sbjct: 189 DLYATVFENTLMKHHVALPPGSMGKISYI 217
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 106 bits (255), Expect = 1e-23
Identities = 53/89 (59%), Positives = 65/89 (73%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLRTGK-----PLSVELGPGILGSIFDGIQRPLKDINELTQSIYIP 420
QVYEET+G+ V DPVLRT K PLSVELGPGILG+IFDGIQRPLK I + +YIP
Sbjct: 66 QVYEETAGLMVNDPVLRTRKVMPAQPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIP 125
Query: 421 KGINVPSLAREVDWEFNPLNVKVGSHITG 507
+G++VP+L ++ W F P + VG ITG
Sbjct: 126 RGVSVPALDKDALWHFKPEKLGVGDIITG 154
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/64 (59%), Positives = 46/64 (71%)
Frame = +2
Query: 62 MASKGGLRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEG 241
MA + T + E E +GYV VSGPVV A+ M G+AMYELVRVG++ L+GEIIRLEG
Sbjct: 1 MAFGDRITTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEG 60
Query: 242 DMAT 253
D AT
Sbjct: 61 DSAT 64
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +3
Query: 510 DLYGIVHENTLVKHRMLVPPKAKGTVTYI 596
DLY IV+ENTL++H++ +PP A G ++YI
Sbjct: 156 DLYAIVNENTLMQHKVALPPGAMGKISYI 184
>11_01_0617 - 4939108-4939259,4939584-4940259
Length = 275
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 80 LRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMA 250
L +A EE+EER G F V+ + +A+++ VR+G LVG ++ + +A
Sbjct: 116 LLDMAMEEDEERGGARFRVADVLEKQNGRRETALHDAVRLGDERLVGHLMAVHPRLA 172
>04_04_0028 -
22243272-22243577,22244564-22244713,22244919-22245656,
22247233-22247331,22247541-22247933,22248806-22248961
Length = 613
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 150 SLPKRCPDLLCTSWSVSVTMNSSVRLSVLKVTW 248
+ P CPDL+CT S + ++R SVL W
Sbjct: 210 AFPGCCPDLICTILS-KLPQKEAIRTSVLSSKW 241
>03_01_0502 -
3779551-3779562,3779863-3780012,3780129-3780172,
3780256-3780319,3780422-3780655,3780765-3780908,
3781027-3781221,3781447-3781522,3781689-3781788,
3781955-3781988,3782076-3782160,3782226-3782290,
3782380-3782478,3782810-3782875,3785485-3785721
Length = 534
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 353 EPKIPGPSSTDKGFPVRSTGSPTVTPEVSSYTW--WWPCHLQD 231
EP+ GP + KGF TG P+V V+ TW W+P L D
Sbjct: 288 EPEGTGPLAVLKGFRNLPTGMPSVL-IVTGLTWLSWFPFILYD 329
>11_06_0092 + 19973364-19975983,19976272-19976648
Length = 998
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 259 VYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPL 381
V E +G+ D RTG L + PG+ G + D + R L
Sbjct: 894 VLETVTGMRPADSTFRTGLSLRQYVEPGLHGRLMDVVDRKL 934
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 158 EKMSGSAMYELVRVGYNELVGEI 226
EKMS + EL+ +GYN+L G I
Sbjct: 469 EKMSNLSSLELIDLGYNQLTGAI 491
>05_04_0061 + 17582368-17582606,17582716-17583090,17593677-17594265
Length = 400
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = -3
Query: 362 SKMEPKIPGPSSTDKGFPVRSTGSPTVTPEVSSYTWWWPC 243
S EP P S G+ R V+ E WWWPC
Sbjct: 15 STTEPAKSSPPSQRYGYLERIRNLSVVSAEAGR--WWWPC 52
>02_05_1006 +
33448476-33448915,33449016-33449083,33449681-33449751,
33449905-33450156,33450473-33450636,33450731-33450773,
33451044-33451161,33451384-33451481,33451550-33451594
Length = 432
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 496 GTRP*HLMG*IPSQPPWPGKAR 431
G RP MG PS PP PG++R
Sbjct: 33 GRRPASAMGQAPSSPPGPGRSR 54
>01_06_0813 -
32165310-32165546,32165691-32165783,32166075-32166218,
32166685-32166771,32166858-32167077,32167879-32168039
Length = 313
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1
Query: 214 EFIVTDTDQLVHSRSGHLFGSDDGSRYGEDISEPLL 107
EF+V +T++L H + G D+ + ED+ EPLL
Sbjct: 115 EFMVRETEKL-HQQVGRYKSPDEHPFFPEDLPEPLL 149
>02_01_0299 +
2001938-2002510,2002821-2003033,2003129-2003333,
2003485-2003560,2003665-2003800,2003905-2004009,
2004095-2004172,2004264-2004353,2004441-2004506,
2004836-2004892,2004996-2005073,2005165-2005212,
2005330-2005401
Length = 598
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 59 KMASKGGLRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEII 229
K + G + T+A+ E EE+ G +F GP+ + G+ ++ VG +G I+
Sbjct: 124 KFSRLGQMSTVASPEQEEQEGVLFRGGGPMCDF-AVPGAQDTTVLVVGATSRIGRIV 179
>12_02_0881 -
23970143-23970433,23970814-23971116,23971490-23972077,
23972606-23972761,23972852-23972910,23974294-23974561
Length = 554
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 319 LSVELGPGILGSIFDGIQRPLKDINELTQSI---YIPKGINVPSLAREVDWE 465
L LGP +LG DG R ++D+ + I +P + VP E W+
Sbjct: 92 LGRRLGPRLLGRGNDGSMRVMRDLYRMLDEINSEEVPVDLKVPDSFDEFIWD 143
>07_03_0537 -
19218461-19218982,19219482-19219868,19219993-19220154,
19220464-19221117,19221233-19221277,19223300-19223845,
19223930-19224307,19224642-19225313,19225373-19225456
Length = 1149
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 4/28 (14%)
Frame = +3
Query: 138 LDPSSLPKRC--PDLLCTS--WSVSVTM 209
+DP+S+PK C PD LC S W VS +
Sbjct: 856 VDPASIPKHCAAPDNLCFSRTWLVSFNL 883
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 417
QV+E TSG+ ++ TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 111 QVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 165
>11_06_0768 + 27129007-27129038,27129140-27129220,27129723-27130089,
27130165-27130255,27130515-27130595,27130764-27131830,
27132060-27132071,27132465-27133209,27133210-27135244,
27135712-27135787,27135925-27136029,27137080-27137166
Length = 1592
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +1
Query: 436 PSLAREVDWEFNPLNVKVGSHITGEIC---MVLYT 531
P + +DWE+ PLN + H G+ MVLY+
Sbjct: 1309 PLIWNPIDWEYQPLNPETHQHDHGQPMGSEMVLYS 1343
>11_06_0690 + 26303733-26306540
Length = 935
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 127 DISEPLLILLIGDRPQTAFARHFELVILYPRRERWKRRTENG 2
D + PL + L+G RP+ + R + V+ Y R + +NG
Sbjct: 827 DFAAPLTMALLGRRPRPSRVRQRQQVVPYSPRRSNRLAAKNG 868
>09_04_0676 -
19383757-19383890,19384308-19384415,19384493-19384679,
19384937-19385143
Length = 211
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = -1
Query: 268 LRIPGGGHVTFKTDNLTDEFIVTDTDQLVHSRSGHLFGSDDGSRYGEDISEPLLILLIGD 89
+R P G + D ++D+F + +VH R H F + S Y E + +L+
Sbjct: 70 VRDPNGNQIHDSRDKISDKF-----EFIVHRRGVHRFCFTNKSPYHETVDFDVLVSHFSY 124
Query: 88 RPQTAFARHF 59
Q A HF
Sbjct: 125 YDQHAKDEHF 134
>03_06_0108 +
31708713-31709079,31709258-31709822,31709933-31710015,
31710231-31710319,31710486-31710559,31710654-31710704,
31710807-31710883,31711454-31712031,31712388-31712555,
31713364-31713417,31713456-31713467,31713554-31713715
Length = 759
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 244 HGHHQVYEETSGVTVGDPVLRTGKPLSVELGPG 342
HGHHQ + + G GDP G L + PG
Sbjct: 156 HGHHQGHAQDGGAVGGDPHHGGGGFLQCAVIPG 188
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 74 GGLRTIANEENEERFGYVFAVSGPVV-TAEKMSGSA 178
GG RT E+ EE+ V V GP++ K SG A
Sbjct: 621 GGARTAEKEDYEEKLKEVEQVCGPIIKQVYKKSGDA 656
>02_04_0098 +
19701999-19702185,19703698-19704551,19704732-19704890,
19705290-19705537,19705837-19705927,19706066-19706251
Length = 574
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 331 LGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWEFNPL 477
L G ++ GI RP +IN Q+I PK + P L V +NP+
Sbjct: 126 LPDGTPAILYTGIDRP--NINYQVQNIAFPKNASDPLLREWVKPAYNPV 172
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 417
QV+E TSG+ ++ TG+ L + +LG +F+G +P+ + + Y+
Sbjct: 71 QVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRVFNGSGKPIDNGPPILPEAYL 125
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,970,712
Number of Sequences: 37544
Number of extensions: 392501
Number of successful extensions: 1061
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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