BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0929 (598 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_20291| Best HMM Match : ATP-synt_ab (HMM E-Value=0) 48 6e-06 SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11) 29 2.9 SB_47923| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0 SB_44778| Best HMM Match : TPR_2 (HMM E-Value=0.00023) 28 6.6 SB_55653| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6 SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7 >SB_20291| Best HMM Match : ATP-synt_ab (HMM E-Value=0) Length = 475 Score = 48.0 bits (109), Expect = 6e-06 Identities = 18/29 (62%), Positives = 24/29 (82%) Frame = +3 Query: 510 DLYGIVHENTLVKHRMLVPPKAKGTVTYI 596 D+YG V ENT +KH +++ PKAKGT+TYI Sbjct: 9 DIYGYVQENTFIKHHIMLHPKAKGTITYI 37 >SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11) Length = 1692 Score = 29.1 bits (62), Expect = 2.9 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -3 Query: 365 PSKMEPKIPGPSSTDKGFPVRSTGSPTVTPEVSSYTWWWP 246 P+ P IP S G+P +TG PT P SS +P Sbjct: 315 PTTGIPVIPQSSVLTPGYPSANTGYPTAIPGYSSANTGYP 354 >SB_47923| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 323 Score = 28.3 bits (60), Expect = 5.0 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = -1 Query: 298 LDHLQLHLKFLRIPGG-GHVTFKTDNLTDEFIVTDTDQLVHSRSGHLFGSDDGSRYGEDI 122 +DHL +HL GG H T +L D F+ + H + L D R EDI Sbjct: 226 MDHL-IHLGSFNSNGGFWHTTLIEKHLIDYFVPFLPLERAHIKQCALVDLQDKGRKREDI 284 Query: 121 SEPLLILL 98 ++ LL ++ Sbjct: 285 TDDLLNMI 292 >SB_44778| Best HMM Match : TPR_2 (HMM E-Value=0.00023) Length = 1016 Score = 27.9 bits (59), Expect = 6.6 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -1 Query: 247 HVTFKTDNLTDEFIVTDTDQLVHSRSGHLFGSDDGSRYGEDI 122 H+T NLTD+ +T D + S HL SDD G+D+ Sbjct: 484 HLTSDDGNLTDDVHLTSNDVYLTSDGVHL-TSDDVHLTGDDV 524 >SB_55653| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 390 Score = 27.9 bits (59), Expect = 6.6 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +1 Query: 289 GDPVLRTGKPLSVELGPGILGSIFDGIQRPL 381 GD V RTG + V +G +LG + D + P+ Sbjct: 24 GDIVKRTGAIVDVPVGEELLGRVVDALGNPI 54 >SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3306 Score = 27.5 bits (58), Expect = 8.7 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = -2 Query: 447 GQGRHVDTLGDVDGLSQLVDVLEGTLNTVKDGTQD 343 G H+ LGD Q + L G LNTV QD Sbjct: 480 GAETHLSNLGDAPSGKQELHALNGVLNTVDKHHQD 514 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,231,252 Number of Sequences: 59808 Number of extensions: 439457 Number of successful extensions: 1117 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 926 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1115 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1439498375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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