Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0929
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit... 119 2e-27
At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondria... 40 0.002
At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,... 40 0.002
At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondria... 40 0.002
At5g38340.1 68418.m04627 disease resistance protein (TIR-NBS-LRR... 30 1.3
At4g39850.1 68417.m05646 peroxisomal ABC transporter (PXA1) iden... 28 4.1
At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger) fa... 28 4.1
At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putati... 28 5.4
At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putati... 28 5.4
At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATP... 28 5.4
At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putati... 28 5.4
At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putati... 28 5.4
At5g62760.2 68418.m07879 nuclear protein ZAP-related similar to ... 27 7.2
At5g62760.1 68418.m07878 nuclear protein ZAP-related similar to ... 27 7.2
At3g26030.1 68416.m03242 serine/threonine protein phosphatase 2A... 27 7.2
At3g01040.1 68416.m00005 glycosyl transferase family 8 protein c... 27 7.2
At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid t... 27 9.5
>At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit A
/ V-ATPase A subunit / vacuolar proton pump alpha
subunit / V-ATPase 69 kDa subunit identical to SP|O23654
Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)
(V-ATPase A subunit) (Vacuolar proton pump alpha
subunit) (V-ATPase 69 kDa subunit) {Arabidopsis
thaliana}
Length = 623
Score = 119 bits (286), Expect = 2e-27
Identities = 56/96 (58%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINV 435
QVYEET+G+TV DPVLRT KPLSVELGPGILG+IFDGIQRPLK I ++ +YIP+G++V
Sbjct: 68 QVYEETAGLTVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIARISGDVYIPRGVSV 127
Query: 436 PSLAREVDWEFNPLNVKVGSHIT-GEICMVLYTRTL 540
P+L ++ WEF P G IT G++ ++ TL
Sbjct: 128 PALDKDCLWEFQPNKFVEGDTITGGDLYATVFENTL 163
Score = 81.8 bits (193), Expect = 3e-16
Identities = 38/60 (63%), Positives = 47/60 (78%)
Frame = +2
Query: 74 GGLRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMAT 253
G L T ++E E +GYV VSGPVV A+ M+G+AMYELVRVG++ L+GEIIRLEGD AT
Sbjct: 7 GKLTTFEDDEKESEYGYVRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRLEGDSAT 66
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 510 DLYGIVHENTLVKHRMLVPPKAKGTVTYI 596
DLY V ENTL+ H + +PP A G +TYI
Sbjct: 153 DLYATVFENTLMNHLVALPPDAMGKITYI 181
>At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondrial
identical to SP|P83484 ATP synthase beta chain 2,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; strong similarity to SP|P17614 ATP synthase
beta chain, mitochondrial precursor (EC 3.6.3.14)
{Nicotiana plumbaginifolia}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain; supporting cDNA
gi|26452187|dbj|AK118582.1|
Length = 556
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 271 TSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSL 444
T G+ G VL TG P++V +G LG I + + P+ + E+ Y+P + P+L
Sbjct: 141 TEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPAL 198
>At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,
putative strong similarity to SP|P83483 ATP synthase
beta chain 1, mitochondrial precursor (EC 3.6.3.14)
{Arabidopsis thaliana}, SP|P17614 ATP synthase beta
chain, mitochondrial precursor (EC 3.6.3.14) {Nicotiana
plumbaginifolia}; contains Pfam profiles PF00006: ATP
synthase alpha/beta family nucleotide-binding domain,
PF00306: ATP synthase ab C terminal, PF02874: ATP
synthase alpha/beta family beta-barrel domain
Length = 559
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 271 TSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSL 444
T G+ G VL TG P++V +G LG I + + P+ + E+ Y+P + P+L
Sbjct: 144 TEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPAL 201
>At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondrial
identical to SP|P83483 ATP synthase beta chain 1,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; strong similarity to SP|P17614 ATP synthase
beta chain, mitochondrial precursor (EC 3.6.3.14)
{Nicotiana plumbaginifolia}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain; supporting cDNA
gi|26452102|dbj|AK118538.1|
Length = 556
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 271 TSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSL 444
T G+ G VL TG P++V +G LG I + + P+ + E+ Y+P + P+L
Sbjct: 141 TEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPAL 198
>At5g38340.1 68418.m04627 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1059
Score = 29.9 bits (64), Expect = 1.3
Identities = 9/34 (26%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 379 LKDINELTQSIYIPKGIN-VPSLAREVDWEFNPL 477
L+ + + ++ +Y+P+G+N +P R ++W++ P+
Sbjct: 613 LRVLRDRSEKLYLPQGLNYLPKKLRLIEWDYFPM 646
>At4g39850.1 68417.m05646 peroxisomal ABC transporter (PXA1) identical
to peroxisomal ABC transporter PXA1 GI:15320529 from
[Arabidopsis thaliana]; contains Pfam profile PF00005:
ABC transporter;
Length = 1337
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 346 RYRDQVLLTKAFQYGVLDHLQLHLKFLRIPGGGHVTFKTDNLTD 215
RY V+ +G D L+LH KFL + GG + F+ D D
Sbjct: 1035 RYLASVVSQSFMAFG--DILELHKKFLELSGGINRIFELDEFLD 1076
>At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 368
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 403 QSIYIPKGINVPSLAREVDWEFNPLNVKVGSHI 501
+S+ P+G N+PS R++D + N N +GS +
Sbjct: 163 RSVDPPRGRNIPSSRRKIDVDNNNYNHTLGSSV 195
>At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 417
QV+E TSG+ ++ TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 70 QVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 124
>At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 417
QV+E TSG+ ++ TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 70 QVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 124
>At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATPase
B subunit / vacuolar proton pump B subunit / V-ATPase 57
kDa subunit identical to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}
Length = 486
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 417
QV+E TSG+ ++ TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 69 QVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 123
>At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 485
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 417
QV+E TSG+ ++ TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 69 QVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 123
>At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 330
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 417
QV+E TSG+ ++ TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 69 QVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 123
>At5g62760.2 68418.m07879 nuclear protein ZAP-related similar to
nuclear protein ZAP, Mus musculus, EMBL:AB033168 this
cDNA provides a truncated ORF likely due to a skipped
exon. An alternative ORF is provided.
Length = 383
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 365 PSKMEPKIPGPSSTDKG-FPVRSTGSPTVTPEVSSY 261
P + P P PSS FPV + SPT+ P SSY
Sbjct: 204 PLPVSPPPPLPSSHPSSLFPVTTNSSPTIPPS-SSY 238
>At5g62760.1 68418.m07878 nuclear protein ZAP-related similar to
nuclear protein ZAP, Mus musculus, EMBL:AB033168 this
cDNA provides a truncated ORF likely due to a skipped
exon. An alternative ORF is provided.
Length = 661
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 365 PSKMEPKIPGPSSTDKG-FPVRSTGSPTVTPEVSSY 261
P + P P PSS FPV + SPT+ P SSY
Sbjct: 204 PLPVSPPPPLPSSHPSSLFPVTTNSSPTIPPS-SSY 238
>At3g26030.1 68416.m03242 serine/threonine protein phosphatase 2A
(PP2A) regulatory subunit B', putative similar to
SWISS-PROT:Q28653 serine/threonine protein phosphatase
2A, 56 kDa regulatory subunit, delta isoform (PP2A, B
subunit, B' delta isoform, PP2A, B subunit, B56 delta
isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B
subunit, R5 delta isoform, PP2A, B subunit, B'-gamma)
[Oryctolagus cuniculus]; contains Pfam domain, PF01603:
Protein phosphatase 2A regulatory B subunit (B56 family)
Length = 477
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 250 HHQVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINEL 399
H +T + D + TGK + +LGSI +G PLK+ ++L
Sbjct: 231 HRPFIRKTMNNILYDFIFETGKHSGIAEFLEVLGSIINGFALPLKEEHKL 280
>At3g01040.1 68416.m00005 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 533
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +1
Query: 331 LGPGILGSIFDGIQRPLKDINELTQSI---YIPKGINVP 438
LGP +LG I D QR ++D ++ + IP G+ +P
Sbjct: 77 LGPRLLGRIDDSEQRLVRDFYKILNEVSTQEIPDGLKLP 115
>At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 182
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -3
Query: 365 PSKMEPKIPGPSSTDKGFPVRSTGSPTV-TPEVSS 264
P PK+P PS P S SP+V TP V S
Sbjct: 42 PKVPSPKVPTPSVPSPYVPTPSVPSPSVPTPSVPS 76
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,134,027
Number of Sequences: 28952
Number of extensions: 304655
Number of successful extensions: 912
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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