Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0928
(698 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0604 - 16132173-16132391,16132488-16132556,16132824-161328... 44 1e-04
07_01_1036 + 9021395-9021658,9024214-9024690 43 3e-04
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935... 41 8e-04
08_02_1310 - 26037025-26038074 38 0.008
08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546 38 0.008
08_02_1308 - 26024491-26025405 37 0.018
06_01_1008 - 7853089-7854147 37 0.018
08_01_0027 - 195321-195932,197206-197415 36 0.031
10_08_0052 - 14491990-14493108 35 0.054
08_01_0797 + 7711772-7712869 35 0.071
08_01_0801 - 7750548-7751708 34 0.094
08_02_1304 - 26008105-26009070 34 0.12
08_02_1251 - 25592537-25593380,25593589-25593893 33 0.29
10_08_0129 - 15025076-15025858,15025951-15026283 31 0.67
10_08_0122 - 14982676-14983043,14983957-14985145 31 0.67
10_08_0082 + 14713989-14714046,14714109-14714953 31 1.2
04_03_0990 - 21481459-21481933,21482140-21482771 30 1.5
10_08_0073 + 14657400-14657696,14658168-14658229,14658241-14658886 29 3.5
07_03_1436 - 26543846-26546806 29 3.5
04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072 28 6.2
08_01_0802 - 7754561-7755628 28 8.2
03_03_0258 - 15905847-15905990,15906088-15906244,15906374-159065... 28 8.2
>05_03_0604 -
16132173-16132391,16132488-16132556,16132824-16132898,
16132981-16133113,16133188-16133297,16133360-16133407,
16133657-16133983,16135006-16135233,16135360-16135689,
16135780-16136586
Length = 781
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +1
Query: 217 VDVTLAAEGXIAR-HKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMY 387
V++ + G + HKL+LS+ S F +MF M + VF +DV A L+QFMY
Sbjct: 352 VNIYVNGHGLVTHAHKLILSLWSMTFDKMFTNGMKESSASNVFFEDVPVEAFFLLIQFMY 411
Query: 388 QGEVNVKQEEL 420
GE+ V EE+
Sbjct: 412 SGELKVDIEEI 422
>07_01_1036 + 9021395-9021658,9024214-9024690
Length = 246
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +1
Query: 247 IARHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 420
+ H+++L+ SP F+ M + M ++ I+ + DVS+ LR + +MY E + ++
Sbjct: 81 VPAHRVILASRSPVFRAMLENEMEESRSGIIKIYDVSYDVLRAFVHYMYTAEALLDEQMA 140
Query: 421 ASFISTAEQLQVKGL 465
+ + AE+ +VK L
Sbjct: 141 SDLLVLAEKYEVKNL 155
>07_03_1529 +
27491963-27492465,27493045-27493154,27493384-27493510,
27494082-27494430,27494975-27495251,27496236-27496333,
27498090-27498214,27498270-27498326,27498328-27498370,
27498581-27498667,27498802-27498882,27499735-27499901,
27499987-27500098,27500188-27500390,27500473-27500607,
27501106-27501205
Length = 857
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Frame = +1
Query: 169 ANMSAGFHGLLSRGDLVDVTLAAEGXI-ARHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFL 339
+NMS LL+ G D+T +G + HK+VL+ SP F+ ++F M + +
Sbjct: 295 SNMSQHIGQLLTDGKRTDITFEVDGEVFPAHKVVLAARSPVFRAQLFGPMKDKNMKRITI 354
Query: 340 KDVSHSALRDLLQFMYQGEV 399
+D+ S + LL FMY E+
Sbjct: 355 EDMEASVFKALLHFMYWDEL 374
>08_02_1310 - 26037025-26038074
Length = 349
Score = 37.9 bits (84), Expect = 0.008
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +1
Query: 211 DLVDVTLAAEGXIAR-HKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQF 381
D DV L G R H+ VL+ SP F+ M P V L+D+ +A R +L F
Sbjct: 177 DTADVALVVGGETFRAHRAVLAARSPVFKAALFGSMAEATAPSVALRDMDPAAFRAVLHF 236
Query: 382 MYQGEVNVKQEELASF 429
+Y + +ELA F
Sbjct: 237 IYTDALPDDIDELAGF 252
>08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546
Length = 290
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 169 ANMSAGFHGLLSRGDLVDVTL-AAEGXIARHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFL 339
++++A LL + DVT E A HK+VL++ SP F+ E+F M ++ +
Sbjct: 103 SDIAAHLGKLLESKEAADVTFYVGEDTFAAHKVVLAMRSPVFKAELFGPMREAGAQVLPI 162
Query: 340 KDVSHSALRDLLQFMYQGEVNV 405
KD+ + LL F+Y +++
Sbjct: 163 KDIQPDVFKALLHFIYTDSLSI 184
>08_02_1308 - 26024491-26025405
Length = 304
Score = 36.7 bits (81), Expect = 0.018
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +1
Query: 169 ANMSAGFHGLLSRGDLVDVTLAAEG-XIARHKLVLSVCSPYFQE--MFKMNPTQHPIVFL 339
+++ A GLL RG+ DV+ +G H+ VL+ SP F+ + M ++ + L
Sbjct: 112 SDIGAHLGGLLDRGEGTDVSFLVDGETFPAHRAVLAARSPVFRAELLGSMAESKMSSITL 171
Query: 340 KDVSHSALRDLLQFMY 387
D+ R LL+F+Y
Sbjct: 172 HDIEPLTFRALLRFIY 187
>06_01_1008 - 7853089-7854147
Length = 352
Score = 36.7 bits (81), Expect = 0.018
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 196 LLSRGDLVDVTLAAEGXIARHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRD 369
L +G V +A E +A HK++L+ SP F F M + V +KD+ S +
Sbjct: 172 LSEKGADVTFVVAGESFLA-HKIILAARSPVFMAEFFGPMKESSSQCVEIKDIEASVFKA 230
Query: 370 LLQFMYQG 393
+L F+Y G
Sbjct: 231 MLHFIYTG 238
>08_01_0027 - 195321-195932,197206-197415
Length = 273
Score = 35.9 bits (79), Expect = 0.031
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +1
Query: 145 SLCWNNFHANMSAG-FHGLLSRGDLVDVTL-AAEGXIARHKLVLSVCSPYFQEMF--KMN 312
S+ N + S G +L+ DVT+ +G + HK +L+ CSP F+ MF +
Sbjct: 83 SIAVQNIASKSSLGCLSRMLTESIHADVTINTTDGVLKAHKAILASCSPVFESMFLHDLK 142
Query: 313 PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQ 411
+ + + D+ + L+ F+Y G + + Q
Sbjct: 143 EKESSTININDMCLESCSALIGFIY-GTIKLDQ 174
>10_08_0052 - 14491990-14493108
Length = 372
Score = 35.1 bits (77), Expect = 0.054
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +1
Query: 193 GLLSRGDLVDVTLAAEGXIAR-HKLVLSVCSPYFQ-----EMFKMNPTQHPIVFLKDVSH 354
GLL GD DVT G R H+ +L+ SP F+ +M + + + + ++ + D+
Sbjct: 188 GLLESGDGADVTFRVAGEDVRAHRYILAARSPVFKAELFGQMKESSSSSNTVMNVDDMEA 247
Query: 355 SALRDLLQFMY 387
R LL F+Y
Sbjct: 248 EVFRALLAFIY 258
>08_01_0797 + 7711772-7712869
Length = 365
Score = 34.7 bits (76), Expect = 0.071
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +1
Query: 169 ANMSAGFHGLLSRGDLV--DVTLAAEGX-IARHKLVLSVCSPYFQEMF--KMNPTQHPIV 333
+ +S F LL + V DV + EG A HKLVL+ SP F+ F +M +
Sbjct: 174 SELSEHFGKLLEEEEDVGRDVVFSVEGESFAAHKLVLAARSPVFKAEFYGEMIERGTFSI 233
Query: 334 FLKDVSHSALRDLLQFMY 387
+KD+ S R LL F+Y
Sbjct: 234 DIKDMQPSVFRALLHFIY 251
>08_01_0801 - 7750548-7751708
Length = 386
Score = 34.3 bits (75), Expect = 0.094
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +1
Query: 187 FHGLLSRGDLVDVTLAAEGX-IARHKLVLSVCSPYFQ-EMFKM--NPTQHPIVFLKDVSH 354
F LL + DVT G + HKLVL++ SP F+ E+ + P PI + D+
Sbjct: 191 FANLLQSKEGADVTFDVAGEPFSVHKLVLAMRSPVFKAELCGLLREPGTQPITIV-DMQP 249
Query: 355 SALRDLLQFMYQGEVNV 405
+ R LLQF+Y + V
Sbjct: 250 AVFRALLQFIYTDQFPV 266
>08_02_1304 - 26008105-26009070
Length = 321
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +1
Query: 256 HKLVLSVCSPYFQE--MFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 429
H+ VL+ SP F+ + M P V L+D+ + R LL F+Y +V Q E +S
Sbjct: 168 HRAVLAARSPVFRAELLGSMAEATMPCVTLRDIEPATFRALLHFVY---TDVLQIEGSSS 224
Query: 430 ISTAEQLQ 453
ST + LQ
Sbjct: 225 TSTTDLLQ 232
>08_02_1251 - 25592537-25593380,25593589-25593893
Length = 382
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 256 HKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALRDLLQFMYQGE 396
H+ +L+VCSP F+ + + + + L D+ + LL FMY G+
Sbjct: 238 HRALLAVCSPVFKALLLSSTAEAAACSITLNDIKPAMFEALLHFMYTGD 286
>10_08_0129 - 15025076-15025858,15025951-15026283
Length = 371
Score = 31.5 bits (68), Expect = 0.67
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +1
Query: 169 ANMSAGFHGLLSRGDLVDVTLAAEGX-IARHKLVLSVCSPYF-QEMF---KMNPTQHPIV 333
++M + LLS DV G A H+LVL+V SP F E F K + ++
Sbjct: 151 SDMHLHYGDLLSSKRCADVEFLVGGETFAAHRLVLAVRSPVFVAEHFGPMKEGVNVNDVI 210
Query: 334 FLKDVSHSALRDLLQFMYQGE-VNVKQEELAS 426
+ D+ + LL F+Y + + QEE A+
Sbjct: 211 EINDMDAQVFKALLNFIYTDTLLEMDQEEDAT 242
>10_08_0122 - 14982676-14983043,14983957-14985145
Length = 518
Score = 31.5 bits (68), Expect = 0.67
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +1
Query: 169 ANMSAGFHGLLSRGDLVDVTLAAEGX-IARHKLVLSVCSPYF-QEMF---KMNPTQHPIV 333
++M + LLS DV G A H+LVL+V SP F E F K + ++
Sbjct: 179 SDMHLHYGDLLSSKRCADVEFLVGGETFAAHRLVLAVRSPVFVAEHFGPMKEGVNVNDVI 238
Query: 334 FLKDVSHSALRDLLQFMYQGE-VNVKQEELAS 426
+ D+ + LL F+Y + + QEE A+
Sbjct: 239 EINDMDAQVFKALLNFIYTDTLLEMDQEEDAT 270
>10_08_0082 + 14713989-14714046,14714109-14714953
Length = 300
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +1
Query: 220 DVTLAAEGX-IARHKLVLSVCSPYFQE----MFKMNPTQHPIVFLKDVSHSALRDLLQFM 384
DV G +A H+ VL+ SP F+ + K T V ++D+ + LL+FM
Sbjct: 131 DVVFEVGGQTLAAHRCVLAARSPVFKAELYGLMKEGGTAAGAVHIEDIEPRVFKVLLRFM 190
Query: 385 YQGEVNVKQEE 417
Y + +EE
Sbjct: 191 YTDSLPEMEEE 201
>04_03_0990 - 21481459-21481933,21482140-21482771
Length = 368
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 193 GLLSRGDLVDVTLAAEG-XIARHKLVLSVCSPYFQ 294
GLL+ G+ DVT EG A H+ VL+ SP F+
Sbjct: 188 GLLATGEGADVTFEVEGKTFAAHRWVLAARSPVFR 222
>10_08_0073 + 14657400-14657696,14658168-14658229,14658241-14658886
Length = 334
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 220 DVTLAAEGX-IARHKLVLSVCSPYFQ-EMF--KMNPTQHPIVFLKDVSHSALRDLLQFMY 387
DV G A H+ VL+ SP F E+F + + +V + D+ + LL+FMY
Sbjct: 162 DVVFGVGGETFAAHRCVLAAQSPVFSAELFGPMKDSDRAGVVRIDDMEAQVFKALLRFMY 221
Query: 388 QGEVNVKQEE 417
+ +EE
Sbjct: 222 TDSLPEMEEE 231
>07_03_1436 - 26543846-26546806
Length = 986
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
Frame = +1
Query: 211 DLVDVTLAAEGXIARHKLVLSVCSPYFQEMFKMNPTQHPIVFL-KDVSHSAL--RDLLQF 381
++ D A + R L + P++ M P ++ L DV + ++ +
Sbjct: 864 EVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRGVISLWSDVKQAVTCDKESCEM 923
Query: 382 MYQGEVNVKQEELASFISTAEQLQVKGLTGNQNEESSTPSKPSRLRGQAPGR 537
E+ + +EE+ ++TA + +V + EES +K L P +
Sbjct: 924 AQTREITLAREEIRLAVTTASEGEVPATKLTKTEESDAKTKKIPLDPSDPNK 975
>04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072
Length = 414
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 277 CSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVN-VKQEEL 420
C P + F T++P+VFL+ + + DLLQ + V+ K+ EL
Sbjct: 253 CEPRKEIFFTERNTENPLVFLRFLVSTPWGDLLQIKFSRRVHRTKRLEL 301
>08_01_0802 - 7754561-7755628
Length = 355
Score = 27.9 bits (59), Expect = 8.2
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +1
Query: 169 ANMSAGFHGLLSRGDLVDVTLAAEGX-IARHKLVLSVCSPYFQEMF--KMNPTQHPIVFL 339
+NM LL + DV G HKLVL++ SP F+ M + + +
Sbjct: 179 SNMMQQLGDLLESKEGADVVFDVAGETFPAHKLVLAMRSPVFKAELCGPMRESGTEPISI 238
Query: 340 KDVSHSALRDLLQFMY 387
D+ + LLQF+Y
Sbjct: 239 VDMQPVVFKALLQFIY 254
>03_03_0258 -
15905847-15905990,15906088-15906244,15906374-15906504,
15906991-15907126,15907193-15907464,15907874-15908169,
15908279-15908646,15908922-15908987,15909064-15909129,
15909226-15909297,15909391-15909459,15909549-15909620,
15909708-15909776,15909874-15909945,15910046-15910178,
15911223-15911361
Length = 753
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +1
Query: 310 NPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTA----EQLQVKGLTGNQ 477
N T ++ L+D + D+L + ++NV+ +L+ I LQ+ G + +
Sbjct: 202 NLTSLTMLHLQDNRFTGTIDVLSDLPLTDLNVQNNQLSGAIPDKLKGISNLQISGNSFSN 261
Query: 478 NEESSTPSKPSRLRGQAPGR 537
+ S PS P Q+P R
Sbjct: 262 SPVSPAPSSPPSTTSQSPPR 281
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,272,086
Number of Sequences: 37544
Number of extensions: 324860
Number of successful extensions: 819
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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