Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0923
         (663 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039710-7|AAB96687.1|  123|Caenorhabditis elegans Hypothetical ...    29   2.9  
AC024780-2|AAO25975.1|  275|Caenorhabditis elegans Serpentine re...    29   3.9  
Z81050-8|CAB02859.1|  371|Caenorhabditis elegans Hypothetical pr...    28   6.8  
U97009-2|AAC69029.3|  342|Caenorhabditis elegans Serpentine rece...    27   9.0  
U29488-10|AAK93843.1|  813|Caenorhabditis elegans Dnaj domain (p...    27   9.0  

>AF039710-7|AAB96687.1|  123|Caenorhabditis elegans Hypothetical
           protein C46E10.2 protein.
          Length = 123

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 366 FYNIYWSKYNIFSTTF 413
           F+NIYWS Y IF  TF
Sbjct: 11  FFNIYWSFYAIFGFTF 26


>AC024780-2|AAO25975.1|  275|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 48 protein.
          Length = 275

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 17/70 (24%), Positives = 31/70 (44%)
 Frame = +3

Query: 294 WGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFM 473
           W  Y +IS +   F+  + T + +F   ++    I        SW  S     SR++Y  
Sbjct: 8   WLCYGIISIVLTAFLVIIITTSHLFQQSFYRLIAIHLVIVI-ISWINSWT---SRIVYTR 63

Query: 474 KYNFFIRFIY 503
            Y+FF + ++
Sbjct: 64  DYSFFAKALF 73


>Z81050-8|CAB02859.1|  371|Caenorhabditis elegans Hypothetical
           protein C50B6.10 protein.
          Length = 371

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +3

Query: 312 ISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIF 446
           + F+YR +  F + +   F+N  W  + IF    F   W+ S  F
Sbjct: 111 VQFVYRYWAIF-HVRRLSFFNGIWILFWIFLAMMFGVDWSCSVYF 154


>U97009-2|AAC69029.3|  342|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 33 protein.
          Length = 342

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +3

Query: 318 FIYRPFIKFLYTKNSIFYNIYWSK-YNIFSTTFFRFSWNTSTIFRLSRLIYFMKYNFF 488
           F Y  ++  L+   + F ++  S  Y  FS  F RF+ NTS I  L  + YF  +  F
Sbjct: 107 FSYMSYVGILHLSLNSFISLMLSMIYRYFSIRFKRFTANTSII--LCIIGYFFPFLIF 162


>U29488-10|AAK93843.1|  813|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 8 protein.
          Length = 813

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +3

Query: 381 WSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMKYNFFIRFIYFSLS 515
           W   N  S   F  + N     R+  L+  MKY+ F RF Y SLS
Sbjct: 251 WKSSNKISVVIFGAAANP----RIRYLLAAMKYSQFARFAYVSLS 291


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,944,244
Number of Sequences: 27780
Number of extensions: 188730
Number of successful extensions: 444
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)