Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0921
         (668 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0110 + 22840636-22840720,22840958-22841310                       29   4.4  
08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-90...    28   5.9  
09_04_0247 + 16030543-16031324,16032812-16033088,16033374-160335...    28   7.7  

>04_04_0110 + 22840636-22840720,22840958-22841310
          Length = 145

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -3

Query: 123 CLP*CLPCSSVRIPSRPLSTRISCPICHTCTFYGR 19
           C P C PC  V +  R      SCP+ + C   GR
Sbjct: 105 CGP-CSPCRRVMVSLRCAEAAESCPVAYRCMCRGR 138


>08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-901831,
            901912-902016,902245-902391,903273-903354,903445-903786,
            903873-904177,904259-904435,904799-904852,905171-905254,
            905855-905968,906048-906321,907552-907926,908003-908267,
            908352-908538,908615-909052,909895-909966,910037-910630,
            911471-911623,911700-911828,912326-912657,912705-912840,
            913046-913491,913580-915087,915169-915431,915622-915738,
            915844-916014,916743-916845,916930-916988,918360-918461,
            918560-918649,918727-918877,919745-919830,919926-920102,
            920915-920978,921859-922008,923132-923211,923311-923376,
            924540-924747,925502-925575,925761-925848,926140-926312,
            926541-926609,926698-926741,927074-927167,927290-927366,
            927475-927552,927992-928085
          Length = 3314

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 425  HETMQTKCKYFQSPCQAIICKTFHKTSSNKNKVREMXSSM 544
            +ET    C   Q P    +CKT H   S+ +    M +S+
Sbjct: 1070 NETSDLNCYCAQGPASNSLCKTKHSNCSSNSSQNSMNASL 1109


>09_04_0247 + 16030543-16031324,16032812-16033088,16033374-16033559,
            16033714-16033866,16034277-16034702,16035922-16037668,
            16037687-16038183,16038519-16038709,16038786-16038941,
            16040077-16040311,16040416-16040723,16041279-16041439,
            16041852-16041895,16041975-16042067
          Length = 1751

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 249  DPEFNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSN 374
            DP+F + Y + EES +    + S  T + T    LQK +K+N
Sbjct: 1268 DPDFKNSYLKKEESTD----DASSKTEETTNNASLQKEEKAN 1305


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,719,317
Number of Sequences: 37544
Number of extensions: 318646
Number of successful extensions: 812
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)