Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0921
(668 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33675| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_43292| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 31 1.1
SB_35214| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 31 1.1
SB_48580| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 31 1.1
SB_5164| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 31 1.1
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 30 2.0
SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17) 30 2.0
SB_50787| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_23154| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_23772| Best HMM Match : Remorin_C (HMM E-Value=1.9) 29 2.6
SB_52694| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_41567| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_19215| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_33233| Best HMM Match : Vicilin_N (HMM E-Value=1) 29 3.4
SB_3122| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_58470| Best HMM Match : VPS9 (HMM E-Value=0.0012) 29 4.5
SB_38361| Best HMM Match : VPS9 (HMM E-Value=0.0012) 29 4.5
SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_37356| Best HMM Match : Integrin_alpha (HMM E-Value=0.24) 28 7.9
SB_9234| Best HMM Match : Topoisom_I_N (HMM E-Value=0) 28 7.9
>SB_33675| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +3
Query: 249 DPEFNDDYHEAEESIEPTNHEISKNTRQATLEIYL----QKIKKSNMEKNMRIEQEVRNS 416
DPE+N+DY +PT + KN+R+ L I+ Q+ + + + ++ VR
Sbjct: 19 DPEYNEDYD------KPTTTKTGKNSRRFCLSIFFYFQGQEALSGEEKCDRKAKRIVRTH 72
Query: 417 LKAMKQCKQNVNIFKVPAKPLFARH 491
+K + V ++ + P+F H
Sbjct: 73 MKVAQTVLVLVGVYIITWIPVFVLH 97
>SB_43292| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 645
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 212 LASTSAVCLLADFSITNARKDFRGVKSLPNVCRSVFLVVL*ESHPDPSALEFLVPS-VIL 36
L ST +++TN+ K LPN+ ++V L +H P+ L L PS
Sbjct: 328 LPSTPPSPFYKSYALTNSSPLSSPRKILPNIQQTVRFPALYNTHTGPNNLSSLTPSKAPQ 387
Query: 35 VLSTGGN 15
VLS GG+
Sbjct: 388 VLSKGGS 394
>SB_35214| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 762
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 212 LASTSAVCLLADFSITNARKDFRGVKSLPNVCRSVFLVVL*ESHPDPSALEFLVPS-VIL 36
L ST +++TN+ K LPN+ ++V L +H P+ L L PS
Sbjct: 180 LPSTPPSPFYKSYALTNSSPLSSPRKILPNIQQTVRFPALYNTHTGPNNLSSLTPSKAPQ 239
Query: 35 VLSTGGN 15
VLS GG+
Sbjct: 240 VLSKGGS 246
>SB_48580| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 847
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 212 LASTSAVCLLADFSITNARKDFRGVKSLPNVCRSVFLVVL*ESHPDPSALEFLVPS-VIL 36
L ST +++TN+ K LPN+ ++V L +H P+ L L PS
Sbjct: 328 LPSTPPSPFYKSYALTNSSPLSSPRKILPNIQQTVRFPALYNTHTGPNNLSSLTPSKAPQ 387
Query: 35 VLSTGGN 15
VLS GG+
Sbjct: 388 VLSKGGS 394
>SB_5164| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 435
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 212 LASTSAVCLLADFSITNARKDFRGVKSLPNVCRSVFLVVL*ESHPDPSALEFLVPS-VIL 36
L ST +++TN+ K LPN+ ++V L +H P+ L L PS
Sbjct: 328 LPSTPPSPFYKSYALTNSSPLSSPRKILPNIQQTVRFPALYNTHTGPNNLSSLTPSKAPQ 387
Query: 35 VLSTGGN 15
VLS GG+
Sbjct: 388 VLSKGGS 394
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Frame = +3
Query: 156 TSVSNGKVR*ETDCTC*CQRNF*NATSKFYRDPEFNDDYHEAEESIEPTNH--EISKNTR 329
T S G+ +TD + + ++ ++T Y D + +A E E TNH +I+ +
Sbjct: 530 TVYSPGEREADTDSSHAIEESYLSSTHFNYTPNYITDIFEDASEGKESTNHTDDIAASGE 589
Query: 330 QATLEIYLQKIKKSNME----KNMRIEQEVRNSLKAM 428
LEI I N ++ VRN LK +
Sbjct: 590 DWDLEIEASYISNPNAHAPAPPTKMVDMSVRNQLKCL 626
>SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17)
Length = 761
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 404 FLFYSHVFLHV--AFLYFLQIYF*GCLTSIFRYFMICWFD*FLCFMVVIIKFGISVEF 237
F+ Y + FL V AF+ F+ I+F + +F F + F F F+ ++ F +SV F
Sbjct: 687 FVVYPYFFLFVVFAFVVFIFIFFFAFVIFVFNAFFV--FVVFAFFVFLVFVFFVSVVF 742
>SB_50787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 599
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 157 RALVMEKSAKRQTALVDAKEISKMPQANSTEIPNLMMTTMKQRNQSNQQIMKYLKIL 327
R + + KR+ +DA+E S+ A+S EI ++T + + +Q + YL+ L
Sbjct: 115 RNFLQSRGKKRKEKQIDAEEKSEKSSASSGEILKQVLTPKEDDFSAQRQFIGYLREL 171
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 249 DPEFNDDYHEAEESIEPTNHEISKNTRQATLEI-YLQKIKKSNM 377
DPE+N+DY PT + KN+RQ L I ++ K KK +
Sbjct: 220 DPEYNEDYD------NPTTTKTGKNSRQFCLSIFFISKDKKEEV 257
>SB_23154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/99 (20%), Positives = 40/99 (40%)
Frame = +1
Query: 43 TDGTRNSSAEGSGWDSHRTTRKTLRQTFGKDFTPRKSLRALVMEKSAKRQTALVDAKEIS 222
T+ R+SS++ T T G P++ +L+ +++ + +
Sbjct: 447 TENNRSSSSQPPPSQDQTTASTATTTTTGNPTPPQQHKNSLLPQRNHSIALLVTIPRHTM 506
Query: 223 KMPQANSTEIPNLMMTTMKQRNQSNQQIMKYLKILVKQP 339
K P + + + TMKQ N S ++ + +KQP
Sbjct: 507 KQPNHSIALLVTIPRHTMKQPNHSIALLVTIPRHTMKQP 545
>SB_23772| Best HMM Match : Remorin_C (HMM E-Value=1.9)
Length = 158
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +3
Query: 249 DPEFN---DDYHEAEESIEPTNHEISKNTRQATLEIY-LQKIKKSNMEKN-MRIEQEVRN 413
D E+N DDY +++ E + +++ + +Q + Y QKI + + +R EQEV
Sbjct: 33 DNEYNKNVDDYSNGDDNYERSTSQVTIDAQQRVVAKYRRQKIAREREQNTYLRAEQEVEK 92
Query: 414 SLK 422
+L+
Sbjct: 93 ALQ 95
>SB_52694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1450
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/71 (19%), Positives = 39/71 (54%)
Frame = +3
Query: 249 DPEFNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNSLKAM 428
D E N+D EE ++ T H I+ + + E +++ ++ +++++QEV+ +++ +
Sbjct: 443 DEEKNEDVELVEEDVDDTAHNITADEGEEKEE--EERVISVSLADDLQLDQEVQPAIQPL 500
Query: 429 KQCKQNVNIFK 461
Q + ++ +
Sbjct: 501 CQNDRGTDLIE 511
>SB_41567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/71 (18%), Positives = 38/71 (53%)
Frame = +3
Query: 249 DPEFNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNSLKAM 428
D E N+D EE ++ H I+ + + E +++ ++ +++++QEV+ +++ +
Sbjct: 4 DEEKNEDVELFEEGVDDRAHNITADEGEEEEEEEEERVISVSLADDLQLDQEVQPAIQPL 63
Query: 429 KQCKQNVNIFK 461
Q + ++ +
Sbjct: 64 CQNDRGTDLIE 74
>SB_19215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 19 PPVESTSMTDGTRNSSAEGSGWDSHR-TTRKTLRQTFGKDFTPRKSLRALVMEKSAKRQT 195
P +++ GT N SAE + + HR TT + G +T R+ L A A +Q
Sbjct: 715 PQGSTSAQPTGTANGSAEAADDEHHRKTTHEPALSLIGL-YTRRRELAAAFTRTPAVKQR 773
Query: 196 ALVDAKEISKM 228
A + SK+
Sbjct: 774 AAEGTDDRSKI 784
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 246 RDPEFNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRI 395
RDP N D +E P+ H + KN+ + L+K K+N++ N+++
Sbjct: 775 RDPSANSDGRGTDE---PSGH-LDKNSNSEVSDETLEKTLKANVQDNIKV 820
>SB_33233| Best HMM Match : Vicilin_N (HMM E-Value=1)
Length = 305
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/71 (18%), Positives = 38/71 (53%)
Frame = +3
Query: 249 DPEFNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNSLKAM 428
D E N+D EE ++ H I+ + + E +++ ++ +++++QEV+ +++ +
Sbjct: 189 DEEKNEDVELFEEGVDDRAHNITADEGEEEEEEEEERVISVSLADDLQLDQEVQPAIQPL 248
Query: 429 KQCKQNVNIFK 461
Q + ++ +
Sbjct: 249 CQNDRGTDLIE 259
>SB_3122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1246
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 258 FNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRN-SLKAMKQ 434
FN+ Y E + + +P N +N EI + I K ++E+ R Q RN SL A +
Sbjct: 511 FNELYQEEQANFQPGNRNDPENPDNCVDEIGFRYIIKEDIERAWR--QVARNESLNA--K 566
Query: 435 CKQN 446
CK N
Sbjct: 567 CKLN 570
>SB_58470| Best HMM Match : VPS9 (HMM E-Value=0.0012)
Length = 598
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 276 EAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQ--EVRNSLKAMKQCKQNV 449
EA++ +E ++S T LEI LQK + + N ++ + E R L ++ + V
Sbjct: 3 EAQDEVESAKVQLSSGTNTGVLEICLQKARANRDSLNNKLLKVLEAREGLSDVEPPRGAV 62
Query: 450 N 452
N
Sbjct: 63 N 63
>SB_38361| Best HMM Match : VPS9 (HMM E-Value=0.0012)
Length = 882
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 276 EAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQ--EVRNSLKAMKQCKQNV 449
EA++ +E ++S T LEI LQK + + N ++ + E R L ++ + V
Sbjct: 287 EAQDEVESAKVQLSSGTNTGVLEICLQKARANRDSLNNKLLKVLEAREGLSDVEPPRGAV 346
Query: 450 N 452
N
Sbjct: 347 N 347
>SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/71 (21%), Positives = 35/71 (49%)
Frame = +1
Query: 19 PPVESTSMTDGTRNSSAEGSGWDSHRTTRKTLRQTFGKDFTPRKSLRALVMEKSAKRQTA 198
P + D S ++ ++SHR T + + +++PR+S R + +++ +R +
Sbjct: 1077 PVISRKPRPDTLMRSKSDFERFESHRVTEDSRTSSPDAEYSPRESPRESLQQRTPRRSHS 1136
Query: 199 LVDAKEISKMP 231
E+S++P
Sbjct: 1137 -----EVSRLP 1142
>SB_37356| Best HMM Match : Integrin_alpha (HMM E-Value=0.24)
Length = 118
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 249 DPEFNDDYHEAEESIEPTNHEISKNTRQATLEI--YLQKIKKSNM 377
DPE+N+DY PT + KN+R+ L I ++ K KK +
Sbjct: 19 DPEYNEDYE------NPTTTKTGKNSRRFCLSIFFFISKDKKEEV 57
>SB_9234| Best HMM Match : Topoisom_I_N (HMM E-Value=0)
Length = 335
Score = 27.9 bits (59), Expect = 7.9
Identities = 28/87 (32%), Positives = 35/87 (40%)
Frame = +3
Query: 261 NDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNSLKAMKQCK 440
N D+ E + E N E T++ LEI KK N E I E + M K
Sbjct: 145 NCDFKEMHKYFEMKNEERKNMTKEEKLEI-----KKKNEE----ILNEYGFCM--MDHHK 193
Query: 441 QNVNIFKVPAKPLFARHSTKPVQTKIK 521
Q V FK+ LF P Q K+K
Sbjct: 194 QRVGNFKIEPPGLFRGRGDHPKQGKLK 220
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,405,440
Number of Sequences: 59808
Number of extensions: 380055
Number of successful extensions: 1325
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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