Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0921
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic int... 32 0.42
U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate fi... 32 0.42
U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate fi... 32 0.42
Z50029-9|CAA90345.4| 1012|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z50028-6|CAA90339.4| 1012|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical pr... 31 0.98
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 30 1.3
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 30 1.3
AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical ... 30 1.7
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 29 2.3
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 29 3.0
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 3.0
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 29 3.9
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 29 3.9
Z54237-1|CAA90987.2| 445|Caenorhabditis elegans Hypothetical pr... 28 5.2
AF068709-10|AAC19252.2| 345|Caenorhabditis elegans Seven tm rec... 28 5.2
Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical p... 28 6.9
Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z37983-9|CAO82014.1| 227|Caenorhabditis elegans Hypothetical pr... 28 6.9
AL023845-1|CAA19539.1| 298|Caenorhabditis elegans Hypothetical ... 28 6.9
L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore nu... 27 9.1
AL110485-10|CAB60358.2| 304|Caenorhabditis elegans Hypothetical... 27 9.1
AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical ... 27 9.1
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 27 9.1
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 27 9.1
>X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 636
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 270 YHEAEESIEPTNHEIS-KNTRQATLEIYLQKIKKSNMEKNMRIEQEV 407
Y+E + T++EI+ KN R + LQ+I E N+RIEQE+
Sbjct: 192 YNEIARIKQLTHNEIALKNERSLNVSDLLQRINLLQTENNVRIEQEL 238
>U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate
filament, c protein2, isoform a protein.
Length = 1128
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 270 YHEAEESIEPTNHEIS-KNTRQATLEIYLQKIKKSNMEKNMRIEQEV 407
Y+E + T++EI+ KN R + LQ+I E N+RIEQE+
Sbjct: 818 YNEIARIKQLTHNEIALKNERSLNVSDLLQRINLLQTENNVRIEQEL 864
>U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate
filament, c protein2, isoform b protein.
Length = 1248
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 270 YHEAEESIEPTNHEIS-KNTRQATLEIYLQKIKKSNMEKNMRIEQEV 407
Y+E + T++EI+ KN R + LQ+I E N+RIEQE+
Sbjct: 818 YNEIARIKQLTHNEIALKNERSLNVSDLLQRINLLQTENNVRIEQEL 864
>Z50029-9|CAA90345.4| 1012|Caenorhabditis elegans Hypothetical
protein F46F6.2 protein.
Length = 1012
Score = 31.1 bits (67), Expect = 0.74
Identities = 22/89 (24%), Positives = 34/89 (38%)
Frame = +1
Query: 22 PVESTSMTDGTRNSSAEGSGWDSHRTTRKTLRQTFGKDFTPRKSLRALVMEKSAKRQTAL 201
P S+ GT +S S + T T F K F PRKS + ++ A+ A+
Sbjct: 559 PSSSSQHQPGTSSSGPSTSSSIASTPTPSTSNSLFDKSFNPRKSAK----KREAREAAAV 614
Query: 202 VDAKEISKMPQANSTEIPNLMMTTMKQRN 288
N+ N M + ++RN
Sbjct: 615 APMTAAVAAVNLNAPSTSNSMQPSTQERN 643
>Z50028-6|CAA90339.4| 1012|Caenorhabditis elegans Hypothetical
protein F46F6.2 protein.
Length = 1012
Score = 31.1 bits (67), Expect = 0.74
Identities = 22/89 (24%), Positives = 34/89 (38%)
Frame = +1
Query: 22 PVESTSMTDGTRNSSAEGSGWDSHRTTRKTLRQTFGKDFTPRKSLRALVMEKSAKRQTAL 201
P S+ GT +S S + T T F K F PRKS + ++ A+ A+
Sbjct: 559 PSSSSQHQPGTSSSGPSTSSSIASTPTPSTSNSLFDKSFNPRKSAK----KREAREAAAV 614
Query: 202 VDAKEISKMPQANSTEIPNLMMTTMKQRN 288
N+ N M + ++RN
Sbjct: 615 APMTAAVAAVNLNAPSTSNSMQPSTQERN 643
>Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical
protein F34D10.4 protein.
Length = 692
Score = 30.7 bits (66), Expect = 0.98
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +3
Query: 285 ESIEPTNHEI--SKNTRQATLEIYLQKIKKSNMEKNMRIEQE 404
ESIEPTN +I ++ + ++YL+K++K + + R+EQE
Sbjct: 538 ESIEPTNRKIETAEEREKKQNDLYLEKMRK--IREKQRLEQE 577
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 255 EFNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNME 380
EF YH+ E E +H+I++ T QA Y ++++KS E
Sbjct: 600 EFEIHYHQIRELAEQKDHQIAQLTEQA--NDYQERLEKSQSE 639
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 255 EFNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNME 380
EF YH+ E E +H+I++ T QA Y ++++KS E
Sbjct: 612 EFEIHYHQIRELAEQKDHQIAQLTEQA--NDYQERLEKSQSE 651
>AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical
protein Y65B4BL.3 protein.
Length = 347
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = -1
Query: 527 LSLYFCLNWFCGMSCK*WLGRDFENIYILFALFHGFKGVS----NFLFYSHVFLHVAFLY 360
+ + F L W + K +L NI +FA F+ ++ S +F F+S + +H A LY
Sbjct: 191 VGVIFYLKWRISFAPKNFLHL---NILFIFAEFNFYQPASLVFVDFGFFSPLVIHFATLY 247
Query: 359 FLQIY 345
++ IY
Sbjct: 248 YIMIY 252
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 7 PSLLPPVESTSMTDGTRNSSAEGSGWDSHRTTRKTLRQTFGKDFTPRKSL 156
PS STS T T +S+ + S TTR+T T + TPRK++
Sbjct: 546 PSTTTSTTSTSTTSSTSSSAPIRAVRTSTPTTRRTTTTTPRRTTTPRKTI 595
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +3
Query: 255 EFNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNSLKAMKQ 434
E+ + +AEE IE NH + + +I + +K+ ME+ +E+ + +A+++
Sbjct: 507 EWKNRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEE--ALEKADQEKDQAIRE 564
Query: 435 CKQNVNIFK 461
++V + K
Sbjct: 565 ASESVRVMK 573
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +3
Query: 255 EFNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNSLKAMKQ 434
E+ + +AEE IE NH + + +I + +K+ ME+ +E+ + +A+++
Sbjct: 507 EWKNRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEE--ALEKADQEKDQAIRE 564
Query: 435 CKQNVNIFK 461
++V + K
Sbjct: 565 ASESVRVMK 573
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 255 EFNDDYHEAEESIEPTNHE--ISKNTRQATLEIYLQKIKK--SNMEKNMRIEQE-VRNSL 419
E D +E++ EPT + I++NTR T E +QK++K + + K +E+E L
Sbjct: 619 EPEDKVTSSEQTPEPTTSQKFIARNTRSKTKESAVQKVEKPATPVAKPAPVEKEPEERPL 678
Query: 420 KAM 428
K+M
Sbjct: 679 KSM 681
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 255 EFNDDYHEAEESIEPTNHE--ISKNTRQATLEIYLQKIKK--SNMEKNMRIEQE-VRNSL 419
E D +E++ EPT + I++NTR T E +QK++K + + K +E+E L
Sbjct: 619 EPEDKVTSSEQTPEPTTSQKFIARNTRSKTKESAVQKVEKPATPVAKPAPVEKEPEERPL 678
Query: 420 KAM 428
K+M
Sbjct: 679 KSM 681
>Z54237-1|CAA90987.2| 445|Caenorhabditis elegans Hypothetical
protein T11B7.1 protein.
Length = 445
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +3
Query: 303 NHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNSLKAMKQCKQNVNIFKVPAK 473
NHE SKN TL+ +++K+ ++ + I+Q+++N + + V F++ +K
Sbjct: 157 NHENSKNVNPLTLDELTEQLKQ--FKEELSIDQKLKNIQLTCEGLQSAVGNFEMNSK 211
>AF068709-10|AAC19252.2| 345|Caenorhabditis elegans Seven tm
receptor protein 33 protein.
Length = 345
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 191 CLLAD-FSITNARKDFRGVKSLPNVCRSVFLVVL*ESHPDPSALEFLVPSVILVLST 24
CL D +S R +F+ V ++ ++F++V E HP + SVI++ T
Sbjct: 155 CLFPDTYSYNYIRTEFKDVYNIGVDRVAIFILVAYEKHPSSEEYKLRPASVIMIAGT 211
>Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.12 protein.
Length = 1080
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 19 PPVESTSMTDGTRNSSAEGSGWDSHRTTRKTLRQT 123
PP T+ T GT ++++ G+G S T T++ T
Sbjct: 1024 PPSTGTTQTSGTGSTASPGTGSTSQPVTATTVQAT 1058
>Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical protein
F23B2.12 protein.
Length = 1080
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 19 PPVESTSMTDGTRNSSAEGSGWDSHRTTRKTLRQT 123
PP T+ T GT ++++ G+G S T T++ T
Sbjct: 1024 PPSTGTTQTSGTGSTASPGTGSTSQPVTATTVQAT 1058
>Z37983-9|CAO82014.1| 227|Caenorhabditis elegans Hypothetical
protein B0393.9b protein.
Length = 227
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 102 CSSVRIPSRPLSTRISCPICHTC 34
C +V P +P ISC +CHTC
Sbjct: 23 CKTVICPKQP-GKLISCDMCHTC 44
>AL023845-1|CAA19539.1| 298|Caenorhabditis elegans Hypothetical
protein Y51B9A.3 protein.
Length = 298
Score = 27.9 bits (59), Expect = 6.9
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = +1
Query: 406 LETPLKP*NNANKM*IFSKSLPSHYLQDIPQNQFKQK*SERNXIIYATG*STPRTAGGFE 585
L P P ANK F LPS L+ + N+ + R I++ + P +
Sbjct: 221 LPPPKPPQGKANKQ--FDVLLPSDVLEIMKTNKISTR--NRARILHVLS-NQPLHQLQLQ 275
Query: 586 FKPPKRLSTQERFVGLTKRL 645
F+PP S ++FV T RL
Sbjct: 276 FQPPCHRSLPQKFVSHTFRL 295
>L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore null
protein 1 protein.
Length = 1010
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +3
Query: 300 TNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNSLKAMKQCKQNVNIF 458
TN E + ++ + K+ K N N I ++ S A QC + +N+F
Sbjct: 166 TNQEDKDMSVDRSVLFTIPKVPKHNATMNRTIPMDLDESKAAGGQCDETMNVF 218
>AL110485-10|CAB60358.2| 304|Caenorhabditis elegans Hypothetical
protein Y46G5A.15 protein.
Length = 304
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 154 LRALVMEKSAKR-QTALVDAKEISKMPQANSTEIPNLMMTTMKQRNQ 291
L + +K A+R + A ++ +EI+ PQ+ + ++T +QRNQ
Sbjct: 226 LARMEAQKMARRYEDAYIEDEEITLNPQSTPEPLEKKSISTSRQRNQ 272
>AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical
protein M01G5.1 protein.
Length = 889
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 255 EFNDDYHEAEESIEPTNHEISKNTRQATLE--IYLQKIKKSNMEKNMRIEQEVRNSLK 422
EF+D E++ E HEI+K R +E I L++++K E+ + E+ R K
Sbjct: 55 EFDDFLIESDFGDERMCHEIAKFKRIERVEAWIVLRELRKKQRERRLEAEKIAREIKK 112
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = +3
Query: 273 HEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNS 416
HE +E + ++E ++ + + E L+K+K+ ++ + EQE R +
Sbjct: 58 HENDEQAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEEREA 105
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = +3
Query: 273 HEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNS 416
HE +E + ++E ++ + + E L+K+K+ ++ + EQE R +
Sbjct: 58 HENDEQAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEEREA 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,722,631
Number of Sequences: 27780
Number of extensions: 300568
Number of successful extensions: 1058
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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