Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0918
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK023345-1|BAB14533.1| 533|Homo sapiens protein ( Homo sapiens ... 33 0.82
DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial l... 32 1.9
BC146783-1|AAI46784.1| 1773|Homo sapiens FNDC1 protein protein. 32 1.9
AB058769-1|BAB47495.2| 1783|Homo sapiens KIAA1866 protein protein. 32 1.9
Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase... 32 2.5
U75308-1|AAC50901.1| 947|Homo sapiens TBP-associated factor pro... 32 2.5
AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 31 3.3
AL137077-3|CAI11046.1| 949|Homo sapiens TAF4 RNA polymerase II,... 31 3.3
AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 31 3.3
AL109911-3|CAI19183.1| 949|Homo sapiens TAF4 RNA polymerase II,... 31 3.3
AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 31 3.3
AF312918-1|AAG34121.1| 919|Homo sapiens MondoA protein. 31 3.3
U69962-1|AAB08433.1| 806|Homo sapiens delayed rectifier potassi... 31 5.8
BC042417-1|AAH42417.1| 650|Homo sapiens C9orf52 protein protein. 31 5.8
AF450111-1|AAP46292.1| 911|Homo sapiens voltage-gated potassium... 31 5.8
AF338730-1|AAK16585.1| 911|Homo sapiens potassium voltage-gated... 31 5.8
AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein. 30 7.7
AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein. 30 7.7
AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein. 30 7.7
>AK023345-1|BAB14533.1| 533|Homo sapiens protein ( Homo sapiens
cDNA FLJ13283 fis, clone OVARC1001113, highly similar to
Homo sapiens diaphanous 1 (HDIA1) mRNA. ).
Length = 533
Score = 33.5 bits (73), Expect = 0.82
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +1
Query: 382 ARVRPPPA--DSVVLPAATDAVATRDASPPPPVATATRERGPAARCCCWSGTPPLYIYCC 555
A + PPP + V +P+ + PPPP+ + R C PP + C
Sbjct: 416 ATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPHHHLLCLGVLEFPPHLLPCL 475
Query: 556 SPVAEQKEFHMLTPLFEVV 612
E++E H+L PLF VV
Sbjct: 476 ----EKQECHLLLPLFLVV 490
>DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial lining
protein protein.
Length = 1836
Score = 32.3 bits (70), Expect = 1.9
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +1
Query: 355 SLDRHSFKLARVRPPPADSVVLPAATDAVATRDA---SPPPPVATATRERGPAAR 510
S DRH+ + RPP A S P+ + A PPPPVAT+ GP +R
Sbjct: 919 STDRHA---SPARPPAARSQQHPSVPRRMTPGRAPQQQPPPPVATSQHHPGPQSR 970
>BC146783-1|AAI46784.1| 1773|Homo sapiens FNDC1 protein protein.
Length = 1773
Score = 32.3 bits (70), Expect = 1.9
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +1
Query: 355 SLDRHSFKLARVRPPPADSVVLPAATDAVATRDA---SPPPPVATATRERGPAAR 510
S DRH+ + RPP A S P+ + A PPPPVAT+ GP +R
Sbjct: 856 STDRHA---SPARPPAARSQQHPSVPRRMTPGRAPEQQPPPPVATSQHHPGPQSR 907
>AB058769-1|BAB47495.2| 1783|Homo sapiens KIAA1866 protein protein.
Length = 1783
Score = 32.3 bits (70), Expect = 1.9
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +1
Query: 355 SLDRHSFKLARVRPPPADSVVLPAATDAVATRDA---SPPPPVATATRERGPAAR 510
S DRH+ + RPP A S P+ + A PPPPVAT+ GP +R
Sbjct: 866 STDRHA---SPARPPAARSQQHPSVPRRMTPGRAPEQQPPPPVATSQHHPGPQSR 917
>Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase II
transcription factor protein.
Length = 1083
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 382 ARVRPPPADSVVLPAATDAVATRDASPPPPVATATRERGPAA 507
A++RPPP S A A A A P P A + GPAA
Sbjct: 124 AKLRPPPEGSAGACAPVPAAAAVAAGPEPAPAGPAKPAGPAA 165
>U75308-1|AAC50901.1| 947|Homo sapiens TBP-associated factor
protein.
Length = 947
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 382 ARVRPPPADSVVLPAATDAVATRDASPPPPVATATRERGPAA 507
A++RPPP S A A A A P P A + GPAA
Sbjct: 20 AKLRPPPEGSAGACAPVPAAAAVAAGPEPAPAGPAKPAGPAA 61
>AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 31.5 bits (68), Expect = 3.3
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 382 ARVRPPPADSVVLPAATDAVATRDASPPPPVATATRERGPAA 507
A++RPPP S A A A A P P A + GPAA
Sbjct: 124 AKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAA 165
>AL137077-3|CAI11046.1| 949|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 949
Score = 31.5 bits (68), Expect = 3.3
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 382 ARVRPPPADSVVLPAATDAVATRDASPPPPVATATRERGPAA 507
A++RPPP S A A A A P P A + GPAA
Sbjct: 20 AKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAA 61
>AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 31.5 bits (68), Expect = 3.3
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 382 ARVRPPPADSVVLPAATDAVATRDASPPPPVATATRERGPAA 507
A++RPPP S A A A A P P A + GPAA
Sbjct: 124 AKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAA 165
>AL109911-3|CAI19183.1| 949|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 949
Score = 31.5 bits (68), Expect = 3.3
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 382 ARVRPPPADSVVLPAATDAVATRDASPPPPVATATRERGPAA 507
A++RPPP S A A A A P P A + GPAA
Sbjct: 20 AKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAA 61
>AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 31.5 bits (68), Expect = 3.3
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 382 ARVRPPPADSVVLPAATDAVATRDASPPPPVATATRERGPAA 507
A++RPPP S A A A A P P A + GPAA
Sbjct: 124 AKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAA 165
>AF312918-1|AAG34121.1| 919|Homo sapiens MondoA protein.
Length = 919
Score = 31.5 bits (68), Expect = 3.3
Identities = 20/45 (44%), Positives = 22/45 (48%)
Frame = +1
Query: 394 PPPADSVVLPAATDAVATRDASPPPPVATATRERGPAARCCCWSG 528
PPPA AAT A A A+PPPP A RE P + SG
Sbjct: 40 PPPASG----AATPARAHASAAPPPPRAGPGREEPPRRQQIIHSG 80
>U69962-1|AAB08433.1| 806|Homo sapiens delayed rectifier potassium
channel protein protein.
Length = 806
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 394 PPPADSVVLPAATDAVATRD--ASPPPPVATATRERGPAAR 510
PP A + + TD T + + PP T +RE+GPAAR
Sbjct: 623 PPSASHLQMKFPTDLPGTEEHQRARGPPFLTLSREKGPAAR 663
>BC042417-1|AAH42417.1| 650|Homo sapiens C9orf52 protein protein.
Length = 650
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 448 RDASPPPPVATATRERGPAARCCCWSGT 531
R ASPPPPV+T++ RG CW G+
Sbjct: 10 RWASPPPPVSTSS--RGVTIALVCWVGS 35
>AF450111-1|AAP46292.1| 911|Homo sapiens voltage-gated potassium
channel alpha subunit Kv2.2 protein.
Length = 911
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 394 PPPADSVVLPAATDAVATRD--ASPPPPVATATRERGPAAR 510
PP A + + TD T + + PP T +RE+GPAAR
Sbjct: 623 PPSASHLQMKFPTDLPGTEEHQRARGPPFLTLSREKGPAAR 663
>AF338730-1|AAK16585.1| 911|Homo sapiens potassium voltage-gated
channel, Shab-related subfamily, member 2 protein.
Length = 911
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 394 PPPADSVVLPAATDAVATRD--ASPPPPVATATRERGPAAR 510
PP A + + TD T + + PP T +RE+GPAAR
Sbjct: 623 PPSASHLQMKFPTDLPGTEEHQRARGPPFLTLSREKGPAAR 663
>AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.
Length = 1250
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 394 PPPADSVVLPAATDAVATRDASPPPPVATATRER 495
PPP S+V P + PPPP A+ T ++
Sbjct: 919 PPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDK 952
>AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.
Length = 1250
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 394 PPPADSVVLPAATDAVATRDASPPPPVATATRER 495
PPP S+V P + PPPP A+ T ++
Sbjct: 919 PPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDK 952
>AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.
Length = 1236
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 394 PPPADSVVLPAATDAVATRDASPPPPVATATRER 495
PPP S+V P + PPPP A+ T ++
Sbjct: 905 PPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDK 938
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,238,154
Number of Sequences: 237096
Number of extensions: 1947068
Number of successful extensions: 7934
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7796
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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