Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0917
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71264-3|CAA95827.1|  325|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical...    28   6.1  
Z82268-9|CAD89738.1|  509|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr...    28   8.1  
AL110471-2|CAB63306.1|  479|Caenorhabditis elegans Hypothetical ...    28   8.1  
AL023835-17|CAD89760.1|  509|Caenorhabditis elegans Hypothetical...    28   8.1  
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical...    28   8.1  
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ...    28   8.1  

>Z71264-3|CAA95827.1|  325|Caenorhabditis elegans Hypothetical
           protein K07G5.4 protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 439 VATRDASPPPPVATATRDXGPPLRAVVGADAAAIY 543
           +++ +ASPPPP  + TR    P   +  + + AIY
Sbjct: 221 ISSSEASPPPPRPSITRTESVPRSILKNSSSFAIY 255


>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
           protein Y59A8B.1a protein.
          Length = 1641

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 397 PPADSVVLPAATDAVATRDASPPPP 471
           PP    V+ A+  A A RD  PPPP
Sbjct: 182 PPPQPPVMTASAAAAAYRDRLPPPP 206


>Z82268-9|CAD89738.1|  509|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1b protein.
          Length = 509

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -2

Query: 537 SGGVRSNNSTERRAXVARRCSDWWRRAGVARRYS 436
           +GG R N+S   R+  ARR S   RRA   RR S
Sbjct: 208 NGGARGNDSPLHRSSAARRHSPPPRRASPPRRTS 241


>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -2

Query: 537 SGGVRSNNSTERRAXVARRCSDWWRRAGVARRYS 436
           +GG R N+S   R+  ARR S   RRA   RR S
Sbjct: 208 NGGARGNDSPLHRSSAARRHSPPPRRASPPRRTS 241


>AL110471-2|CAB63306.1|  479|Caenorhabditis elegans Hypothetical
           protein T06D10.2 protein.
          Length = 479

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 522 SNNSTERRAXVARRCSDWWRRAG 454
           S ++ ER+A +A+R  DW +R G
Sbjct: 423 STDAAERKARLAQRAEDWAKRTG 445


>AL023835-17|CAD89760.1|  509|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1b protein.
          Length = 509

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -2

Query: 537 SGGVRSNNSTERRAXVARRCSDWWRRAGVARRYS 436
           +GG R N+S   R+  ARR S   RRA   RR S
Sbjct: 208 NGGARGNDSPLHRSSAARRHSPPPRRASPPRRTS 241


>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -2

Query: 537 SGGVRSNNSTERRAXVARRCSDWWRRAGVARRYS 436
           +GG R N+S   R+  ARR S   RRA   RR S
Sbjct: 208 NGGARGNDSPLHRSSAARRHSPPPRRASPPRRTS 241


>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
           protein R148.3a protein.
          Length = 1115

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = +1

Query: 394 PPPA-DSVVLPAATDAVATRDASPPPPVATATRDXGPPLRAVVGADAAAI 540
           P PA D VV PA  +       +PPPP      +   P  A   A  A I
Sbjct: 357 PAPAEDPVVTPAPEELTTPPPPAPPPPAPAVPEEAQAPTPAPEEAPEAQI 406


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,462,498
Number of Sequences: 27780
Number of extensions: 302100
Number of successful extensions: 1021
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)