Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0915
(435 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 33 0.077
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 32 0.18
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 32 0.23
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.23
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 32 0.23
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 32 0.23
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 32 0.23
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 32 0.23
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 30 0.72
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 30 0.72
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 29 2.2
SB_19393| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_659| Best HMM Match : DUF265 (HMM E-Value=5.2) 27 5.0
SB_7034| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_47154| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 27 8.8
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 33.5 bits (73), Expect = 0.077
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 277 DKXKFXVX-LDVQHFAPEEISVKTADGYIVVEGQTRGEERSAW 402
D KF + LDV+ F PEEI+ K +G I V G R E +
Sbjct: 2 DADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEEGF 44
Score = 33.1 bits (72), Expect = 0.10
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1
Query: 262 PASKSDKXKFXVXLDVQHFAPEEISVKTADGYIVVEGQTRGEE 390
PA+K D KF + LDV F PEE+ VK + V + EE
Sbjct: 92 PATKDDT-KFTLALDVSDFKPEEVDVKVYGHELSVRARQECEE 133
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 32.3 bits (70), Expect = 0.18
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 301 LDVQHFAPEEISVKTADGYIVVEGQTRGE 387
LDV+++ PEEIS+K G I ++G+ + E
Sbjct: 45 LDVKNYRPEEISLKVEHGRIKIDGKHKSE 73
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 31.9 bits (69), Expect = 0.23
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 301 LDVQHFAPEEISVKTADGYIVVEGQ 375
LDV+ + PEEIS K +G++ V+G+
Sbjct: 12 LDVREYRPEEISFKVENGFVKVQGR 36
Score = 31.9 bits (69), Expect = 0.23
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 301 LDVQHFAPEEISVKTADGYIVVEGQ 375
LDV+ + PEEIS K +G++ V+G+
Sbjct: 246 LDVREYRPEEISFKVENGFVKVQGR 270
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 31.9 bits (69), Expect = 0.23
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 301 LDVQHFAPEEISVKTADGYIVVEGQ 375
LDV+ + PEEIS K +G++ V+G+
Sbjct: 12 LDVREYRPEEISFKVENGFVKVQGR 36
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 31.9 bits (69), Expect = 0.23
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 265 ASKSDKXKFXVXLDVQHFAPEEISVKTADGYIVVEGQTRGEE 390
A+ D KF + LDV F PEE+ VK + V + EE
Sbjct: 20 AATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQECEE 61
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 31.9 bits (69), Expect = 0.23
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 301 LDVQHFAPEEISVKTADGYIVVEGQ 375
LDV+ + PEEIS K +G++ V+G+
Sbjct: 12 LDVREYRPEEISFKVENGFVKVQGR 36
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 31.9 bits (69), Expect = 0.23
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 301 LDVQHFAPEEISVKTADGYIVVEGQ 375
LDV+ + PEEIS K +G++ V+G+
Sbjct: 12 LDVREYRPEEISFKVENGFVKVQGR 36
>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
Length = 436
Score = 31.9 bits (69), Expect = 0.23
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 272 KVIRXSSKXXXTSSISPRKKSLLKXRTATSWLKGKHEEKKDQHGYISRQFTRRY 433
K K + R++ LLK W + KHEE++D+HGY+ + T ++
Sbjct: 40 KATSLKKKQEEERAAKERQEKLLKLYEL--WHQVKHEEREDRHGYLKDKVTLQH 91
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 30.3 bits (65), Expect = 0.72
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 301 LDVQHFAPEEISVKTADGYIVVEGQ 375
LDV+ + PEEIS K +G + V+G+
Sbjct: 13 LDVREYRPEEISFKVENGVVKVQGR 37
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 30.3 bits (65), Expect = 0.72
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 301 LDVQHFAPEEISVKTADGYIVVEGQ 375
LDV+ + PEEIS K +G + V+G+
Sbjct: 12 LDVKEYRPEEISFKVENGVVKVQGR 36
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 281 RXSSKXXXTSSISPRKKSLLKXRTATSWLKGKHEEKKDQH 400
R S+ SS SPRK + T WL+ K + K+ H
Sbjct: 500 RDHSRSFSDSSSSPRKGFISSGLTFEEWLRNKAKAAKENH 539
>SB_19393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1660
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 196 PVSREYYRPWXQLAAAGSRTWXPASKSD 279
PV+ + R W + A GSR W P + +D
Sbjct: 1392 PVNADGSRQWSPVNADGSRQWSPVNDAD 1419
>SB_659| Best HMM Match : DUF265 (HMM E-Value=5.2)
Length = 229
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +2
Query: 275 VIRXSSKXXXTSSISPRKKSLLKXRTATSWLKGKHEEKKDQHGY 406
V+ +K S +KK +K ++ +W + + EE+K H Y
Sbjct: 114 VVYEVTKTLGLRGSSTKKKKRIKKKSPLAWDRTRSEEQKGNHTY 157
>SB_7034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 27.1 bits (57), Expect = 6.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 317 SPRKKSLLKXRTATSWLKGKHEEKKDQHGY 406
S +KKS LK ++ +W + + EE+ H Y
Sbjct: 13 STKKKSELKKKSPLAWDRTRSEEQNGNHTY 42
>SB_47154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.1 bits (57), Expect = 6.7
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 317 SPRKKSLLKXRTATSWLKGKHEEKKDQHGY 406
S +KK+ LK ++ +W + ++EE+ H Y
Sbjct: 6 STKKKNELKKKSPLAWDRTRYEEQNGNHTY 35
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 71 NKMSLIXWLXXYGIXRPRRLMDQHFGLGADSGRXSQCCNRXPL*AENTTXRGVNLL 238
N ++ + G+ R R L+ +HFG G D + Q C+ + RG+N L
Sbjct: 427 NLYGIVRYCQQQGVCR-RTLIGRHFGEGWDPAQCKQMCDNC---SRRDDERGLNEL 478
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,976,525
Number of Sequences: 59808
Number of extensions: 166357
Number of successful extensions: 613
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 834771332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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