Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0915
(435 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 37 0.007
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 35 0.029
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 35 0.029
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 35 0.029
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 33 0.068
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 33 0.068
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 33 0.068
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 33 0.068
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 33 0.068
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 33 0.068
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 33 0.068
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 33 0.12
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 30 0.63
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 30 0.63
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 30 0.83
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 30 0.83
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 30 0.83
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 29 1.5
M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein. 29 1.9
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 27 4.4
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 27 7.8
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 36.7 bits (81), Expect = 0.007
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 274 SDKXKFXVXLDVQHFAPEEISVKTADGYIVVEGQ 375
+D +F V +D F PEEI VKT D +++EG+
Sbjct: 109 NDDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGR 142
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 34.7 bits (76), Expect = 0.029
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 274 SDKXKFXVXLDVQHFAPEEISVKTADGYIVVEG--QTRGE 387
+D+ KF V LDV HF PE + +K + +EG +T+ E
Sbjct: 3 NDESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSE 42
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 34.7 bits (76), Expect = 0.029
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 274 SDKXKFXVXLDVQHFAPEEISVKTADGYIVVEG--QTRGE 387
+D+ KF V LDV HF PE + +K + +EG +T+ E
Sbjct: 50 NDESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSE 89
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 34.7 bits (76), Expect = 0.029
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 274 SDKXKFXVXLDVQHFAPEEISVKTADGYIVVEG--QTRGE 387
+D+ KF V LDV HF PE + +K + +EG +T+ E
Sbjct: 49 NDESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSE 88
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 33.5 bits (73), Expect = 0.068
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 274 SDKXKFXVXLDVQHFAPEEISVKTADGYIVVEG 372
+D+ KF V LDV HF PE++ ++ + +EG
Sbjct: 41 NDESKFSVQLDVSHFKPEDLKIELDGRELKIEG 73
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 33.5 bits (73), Expect = 0.068
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 274 SDKXKFXVXLDVQHFAPEEISVKTADGYIVVEG 372
+D+ KF V LDV HF PE++ ++ + +EG
Sbjct: 49 NDESKFSVQLDVSHFKPEDLKIELDGRELKIEG 81
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 33.5 bits (73), Expect = 0.068
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 274 SDKXKFXVXLDVQHFAPEEISVKTADGYIVVEG 372
+D+ KF V LDV HF PE++ ++ + +EG
Sbjct: 49 NDESKFSVQLDVSHFKPEDLKIELDGRELKIEG 81
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 33.5 bits (73), Expect = 0.068
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 365 LKGKHEEKKDQHGYISRQFTRRY 433
++GKH EK D++G + R F R+Y
Sbjct: 82 IEGKHNEKTDKYGQVERHFVRKY 104
Score = 31.9 bits (69), Expect = 0.21
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 286 KFXVXLDVQHFAPEEISVKTADGYIVVEGQ 375
++ V +DV F PEE+ V D +++EG+
Sbjct: 56 EYNVSVDVSQFEPEELKVNIVDNQLIIEGK 85
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 33.5 bits (73), Expect = 0.068
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 365 LKGKHEEKKDQHGYISRQFTRRY 433
++GKH EK D++G + R F R+Y
Sbjct: 81 IEGKHNEKTDKYGQVERHFVRKY 103
Score = 31.9 bits (69), Expect = 0.21
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 286 KFXVXLDVQHFAPEEISVKTADGYIVVEGQ 375
++ V +DV F PEE+ V D +++EG+
Sbjct: 55 EYNVSVDVSQFEPEELKVNIVDNQLIIEGK 84
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 33.5 bits (73), Expect = 0.068
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 274 SDKXKFXVXLDVQHFAPEEISVKTADGYIVVEG 372
+D+ KF V LDV HF PE++ ++ + +EG
Sbjct: 50 NDESKFSVQLDVSHFKPEDLKIELDGRELKIEG 82
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 33.5 bits (73), Expect = 0.068
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 274 SDKXKFXVXLDVQHFAPEEISVKTADGYIVVEG 372
+D+ KF V LDV HF PE++ ++ + +EG
Sbjct: 49 NDESKFSVQLDVSHFKPEDLKIELDGRELKIEG 81
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 32.7 bits (71), Expect = 0.12
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1
Query: 280 KXKFXVXLDVQHFAPEEISVKTADGYIVVEGQTRGEERS 396
K KF V LDVQ F P+EI VK + +++ R E RS
Sbjct: 31 KEKFEVGLDVQFFTPKEIEVKVSGQELLI--HCRHETRS 67
Score = 26.6 bits (56), Expect = 7.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 374 KHEEKKDQHGYISRQFTRRY 433
+HE + D HG ++R+ R Y
Sbjct: 62 RHETRSDNHGTVAREINRAY 81
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 30.3 bits (65), Expect = 0.63
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 289 FXVXLDVQHFAPEEISVKTADGYIVVEGQ 375
F + +DV HF PEEI V D + + G+
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTDDTLSISGE 132
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 30.3 bits (65), Expect = 0.63
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 289 FXVXLDVQHFAPEEISVKTADGYIVVEGQ 375
F + +DV HF PEEI V D + + G+
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTDDTLSISGE 132
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 29.9 bits (64), Expect = 0.83
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 271 KSDKXKFXVXLDVQHFAPEEISVKTADGYIVVEGQ 375
+SD + DV ++ PEE++VKT D ++V +
Sbjct: 22 ESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAK 56
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 29.9 bits (64), Expect = 0.83
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 271 KSDKXKFXVXLDVQHFAPEEISVKTADGYIVVEGQ 375
+SD + DV ++ PEE++VKT D ++V +
Sbjct: 119 ESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAK 153
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 29.9 bits (64), Expect = 0.83
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 271 KSDKXKFXVXLDVQHFAPEEISVKTADGYIVVEGQ 375
+SD + DV ++ PEE++VKT D ++V +
Sbjct: 133 ESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAK 167
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 286 KFXVXLDVQHFAPEEISVKTADGYIVVEG 372
KF V LDV F PEE+ V + +EG
Sbjct: 52 KFCVKLDVAAFKPEELKVNLEGHVLTIEG 80
Score = 27.1 bits (57), Expect = 5.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 377 HEEKKDQHGYISRQFTRRY 433
H E K +HG+ R FTR++
Sbjct: 81 HHEVKTEHGFSKRSFTRQF 99
>M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein.
Length = 22
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 274 SDKXKFXVXLDVQHFAPEE 330
+D+ KF V LDV HF PE+
Sbjct: 4 NDESKFSVQLDVSHFKPED 22
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 286 KFXVXLDVQHFAPEEISVKTADGYIVVEGQ 375
KF V L+V +F PEE+ V + ++G+
Sbjct: 51 KFAVNLNVSNFKPEELKVNLEGRQLSIQGE 80
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 365 LKGKHEEKKDQHGYISRQFTRRY 433
++G H EK+D +G I F RR+
Sbjct: 106 VEGSHGEKEDTYGTIESTFKRRF 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,048,944
Number of Sequences: 27780
Number of extensions: 120539
Number of successful extensions: 297
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -