Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0905
(558 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43292| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 31 0.84
SB_35214| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 31 0.84
SB_48580| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 31 0.84
SB_5164| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 31 0.84
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 30 1.5
SB_58470| Best HMM Match : VPS9 (HMM E-Value=0.0012) 30 1.5
SB_38361| Best HMM Match : VPS9 (HMM E-Value=0.0012) 30 1.5
SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17) 30 1.5
SB_50787| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_23154| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_23772| Best HMM Match : Remorin_C (HMM E-Value=1.9) 29 1.9
SB_19215| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_52694| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_41567| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_37356| Best HMM Match : Integrin_alpha (HMM E-Value=0.24) 28 5.9
SB_33233| Best HMM Match : Vicilin_N (HMM E-Value=1) 28 5.9
SB_50799| Best HMM Match : I-set (HMM E-Value=0) 27 7.9
>SB_43292| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 645
Score = 30.7 bits (66), Expect = 0.84
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 212 LASTSAVCLLADFSITNARKDFRGVKSLPNVCRSVFLVVL*ESHPDPSALEFLVPS-VIL 36
L ST +++TN+ K LPN+ ++V L +H P+ L L PS
Sbjct: 328 LPSTPPSPFYKSYALTNSSPLSSPRKILPNIQQTVRFPALYNTHTGPNNLSSLTPSKAPQ 387
Query: 35 VLSTGGN 15
VLS GG+
Sbjct: 388 VLSKGGS 394
>SB_35214| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 762
Score = 30.7 bits (66), Expect = 0.84
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 212 LASTSAVCLLADFSITNARKDFRGVKSLPNVCRSVFLVVL*ESHPDPSALEFLVPS-VIL 36
L ST +++TN+ K LPN+ ++V L +H P+ L L PS
Sbjct: 180 LPSTPPSPFYKSYALTNSSPLSSPRKILPNIQQTVRFPALYNTHTGPNNLSSLTPSKAPQ 239
Query: 35 VLSTGGN 15
VLS GG+
Sbjct: 240 VLSKGGS 246
>SB_48580| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 847
Score = 30.7 bits (66), Expect = 0.84
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 212 LASTSAVCLLADFSITNARKDFRGVKSLPNVCRSVFLVVL*ESHPDPSALEFLVPS-VIL 36
L ST +++TN+ K LPN+ ++V L +H P+ L L PS
Sbjct: 328 LPSTPPSPFYKSYALTNSSPLSSPRKILPNIQQTVRFPALYNTHTGPNNLSSLTPSKAPQ 387
Query: 35 VLSTGGN 15
VLS GG+
Sbjct: 388 VLSKGGS 394
>SB_5164| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 435
Score = 30.7 bits (66), Expect = 0.84
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 212 LASTSAVCLLADFSITNARKDFRGVKSLPNVCRSVFLVVL*ESHPDPSALEFLVPS-VIL 36
L ST +++TN+ K LPN+ ++V L +H P+ L L PS
Sbjct: 328 LPSTPPSPFYKSYALTNSSPLSSPRKILPNIQQTVRFPALYNTHTGPNNLSSLTPSKAPQ 387
Query: 35 VLSTGGN 15
VLS GG+
Sbjct: 388 VLSKGGS 394
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 29.9 bits (64), Expect = 1.5
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Frame = +3
Query: 156 TSVSNGKVR*ETDCTC*CQRNF*NATSKFYRDPEFNDDYHEAEESIEPTNH--EISKNTR 329
T S G+ +TD + + ++ ++T Y D + +A E E TNH +I+ +
Sbjct: 530 TVYSPGEREADTDSSHAIEESYLSSTHFNYTPNYITDIFEDASEGKESTNHTDDIAASGE 589
Query: 330 QATLEIYLQKIKKSNME----KNMRIEQEVRNSLKAM 428
LEI I N ++ VRN LK +
Sbjct: 590 DWDLEIEASYISNPNAHAPAPPTKMVDMSVRNQLKCL 626
>SB_58470| Best HMM Match : VPS9 (HMM E-Value=0.0012)
Length = 598
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 276 EAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQ--EVRNSLKAMKP 434
EA++ +E ++S T LEI LQK + + N ++ + E R L ++P
Sbjct: 3 EAQDEVESAKVQLSSGTNTGVLEICLQKARANRDSLNNKLLKVLEAREGLSDVEP 57
>SB_38361| Best HMM Match : VPS9 (HMM E-Value=0.0012)
Length = 882
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 276 EAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQ--EVRNSLKAMKP 434
EA++ +E ++S T LEI LQK + + N ++ + E R L ++P
Sbjct: 287 EAQDEVESAKVQLSSGTNTGVLEICLQKARANRDSLNNKLLKVLEAREGLSDVEP 341
>SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17)
Length = 761
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -2
Query: 404 FLFYSHVFLHV--AFLYFLQIYF*GCLTSIFRYFMICWFD*FLCFMVVIIKFGISVEF 237
F+ Y + FL V AF+ F+ I+F + +F F + F F F+ ++ F +SV F
Sbjct: 687 FVVYPYFFLFVVFAFVVFIFIFFFAFVIFVFNAFFV--FVVFAFFVFLVFVFFVSVVF 742
>SB_50787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 599
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 157 RALVMEKSAKRQTALVDAKEISKMPQANSTEIPNLMMTTMKQRNQSNQQIMKYLKIL 327
R + + KR+ +DA+E S+ A+S EI ++T + + +Q + YL+ L
Sbjct: 115 RNFLQSRGKKRKEKQIDAEEKSEKSSASSGEILKQVLTPKEDDFSAQRQFIGYLREL 171
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 249 DPEFNDDYHEAEESIEPTNHEISKNTRQATLEI-YLQKIKKSNM 377
DPE+N+DY PT + KN+RQ L I ++ K KK +
Sbjct: 220 DPEYNEDYD------NPTTTKTGKNSRQFCLSIFFISKDKKEEV 257
>SB_23154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/99 (20%), Positives = 40/99 (40%)
Frame = +1
Query: 43 TDGTRNSSAEGSGWDSHRTTRKTLRQTFGKDFTPRKSLRALVMEKSAKRQTALVDAKEIS 222
T+ R+SS++ T T G P++ +L+ +++ + +
Sbjct: 447 TENNRSSSSQPPPSQDQTTASTATTTTTGNPTPPQQHKNSLLPQRNHSIALLVTIPRHTM 506
Query: 223 KMPQANSTEIPNLMMTTMKQRNQSNQQIMKYLKILVKQP 339
K P + + + TMKQ N S ++ + +KQP
Sbjct: 507 KQPNHSIALLVTIPRHTMKQPNHSIALLVTIPRHTMKQP 545
>SB_23772| Best HMM Match : Remorin_C (HMM E-Value=1.9)
Length = 158
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +3
Query: 249 DPEFN---DDYHEAEESIEPTNHEISKNTRQATLEIY-LQKIKKSNMEKN-MRIEQEVRN 413
D E+N DDY +++ E + +++ + +Q + Y QKI + + +R EQEV
Sbjct: 33 DNEYNKNVDDYSNGDDNYERSTSQVTIDAQQRVVAKYRRQKIAREREQNTYLRAEQEVEK 92
Query: 414 SLK 422
+L+
Sbjct: 93 ALQ 95
>SB_19215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 19 PPVESTSMTDGTRNSSAEGSGWDSHR-TTRKTLRQTFGKDFTPRKSLRALVMEKSAKRQT 195
P +++ GT N SAE + + HR TT + G +T R+ L A A +Q
Sbjct: 715 PQGSTSAQPTGTANGSAEAADDEHHRKTTHEPALSLIGL-YTRRRELAAAFTRTPAVKQR 773
Query: 196 ALVDAKEISKM 228
A + SK+
Sbjct: 774 AAEGTDDRSKI 784
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 246 RDPEFNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRI 395
RDP N D +E P+ H + KN+ + L+K K+N++ N+++
Sbjct: 775 RDPSANSDGRGTDE---PSGH-LDKNSNSEVSDETLEKTLKANVQDNIKV 820
>SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/71 (21%), Positives = 35/71 (49%)
Frame = +1
Query: 19 PPVESTSMTDGTRNSSAEGSGWDSHRTTRKTLRQTFGKDFTPRKSLRALVMEKSAKRQTA 198
P + D S ++ ++SHR T + + +++PR+S R + +++ +R +
Sbjct: 1077 PVISRKPRPDTLMRSKSDFERFESHRVTEDSRTSSPDAEYSPRESPRESLQQRTPRRSHS 1136
Query: 199 LVDAKEISKMP 231
E+S++P
Sbjct: 1137 -----EVSRLP 1142
>SB_52694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1450
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/60 (21%), Positives = 34/60 (56%)
Frame = +3
Query: 249 DPEFNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNSLKAM 428
D E N+D EE ++ T H I+ + + E +++ ++ +++++QEV+ +++ +
Sbjct: 443 DEEKNEDVELVEEDVDDTAHNITADEGEEKEE--EERVISVSLADDLQLDQEVQPAIQPL 500
>SB_41567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/60 (20%), Positives = 33/60 (55%)
Frame = +3
Query: 249 DPEFNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNSLKAM 428
D E N+D EE ++ H I+ + + E +++ ++ +++++QEV+ +++ +
Sbjct: 4 DEEKNEDVELFEEGVDDRAHNITADEGEEEEEEEEERVISVSLADDLQLDQEVQPAIQPL 63
>SB_37356| Best HMM Match : Integrin_alpha (HMM E-Value=0.24)
Length = 118
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 249 DPEFNDDYHEAEESIEPTNHEISKNTRQATLEI--YLQKIKKSNM 377
DPE+N+DY PT + KN+R+ L I ++ K KK +
Sbjct: 19 DPEYNEDYE------NPTTTKTGKNSRRFCLSIFFFISKDKKEEV 57
>SB_33233| Best HMM Match : Vicilin_N (HMM E-Value=1)
Length = 305
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/60 (20%), Positives = 33/60 (55%)
Frame = +3
Query: 249 DPEFNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNSLKAM 428
D E N+D EE ++ H I+ + + E +++ ++ +++++QEV+ +++ +
Sbjct: 189 DEEKNEDVELFEEGVDDRAHNITADEGEEEEEEEEERVISVSLADDLQLDQEVQPAIQPL 248
>SB_50799| Best HMM Match : I-set (HMM E-Value=0)
Length = 1195
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 175 KSAKRQTALVDAKEISKMPQANSTEIPNLMMTTMKQRNQSNQQIMKYLK 321
K ++ D KE+S PQ N+ + L + K+ + Q + Y+K
Sbjct: 957 KDGRKLVTRPDRKELSITPQENAVKFAYLKIWKAKRSDTGGYQCVAYIK 1005
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,106,726
Number of Sequences: 59808
Number of extensions: 313956
Number of successful extensions: 924
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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