Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0905
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97194-9|AAB52452.1| 336|Caenorhabditis elegans Hypothetical pr... 33 0.18
X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic int... 32 0.32
U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate fi... 32 0.32
U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate fi... 32 0.32
Z50029-9|CAA90345.4| 1012|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z50028-6|CAA90339.4| 1012|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical pr... 31 0.74
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 30 0.98
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 30 0.98
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 29 1.7
AC025724-2|AAG23378.2| 167|Caenorhabditis elegans Hypothetical ... 29 1.7
Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical pr... 29 2.3
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 29 3.0
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 29 3.0
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 28 4.0
AF068709-10|AAC19252.2| 345|Caenorhabditis elegans Seven tm rec... 28 4.0
AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical ... 28 4.0
Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical p... 28 5.2
Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z37983-9|CAO82014.1| 227|Caenorhabditis elegans Hypothetical pr... 28 5.2
AL110485-10|CAB60358.2| 304|Caenorhabditis elegans Hypothetical... 27 6.9
AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical ... 27 6.9
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 27 6.9
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 27 6.9
Z78060-3|CAB01488.2| 215|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z75536-1|CAE17805.1| 195|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z54237-1|CAA90987.2| 445|Caenorhabditis elegans Hypothetical pr... 27 9.1
>U97194-9|AAB52452.1| 336|Caenorhabditis elegans Hypothetical
protein C37A2.8a protein.
Length = 336
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +3
Query: 240 FYRDPEFNDDYHEAEESIEPTNH---EISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVR 410
F R P +H E+ + T+H +++N R+ +E L+ KK++M+K + E E
Sbjct: 184 FGRAPIPEHYHHSEEQRVYGTSHMRLSLNENKRKEEIEKLLEMSKKTDMDKAKKKETEKH 243
Query: 411 NSLKAMKPCNKM 446
+ + NK+
Sbjct: 244 RDILRREKLNKL 255
>X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 636
Score = 31.9 bits (69), Expect = 0.32
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 270 YHEAEESIEPTNHEIS-KNTRQATLEIYLQKIKKSNMEKNMRIEQEV 407
Y+E + T++EI+ KN R + LQ+I E N+RIEQE+
Sbjct: 192 YNEIARIKQLTHNEIALKNERSLNVSDLLQRINLLQTENNVRIEQEL 238
>U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate
filament, c protein2, isoform a protein.
Length = 1128
Score = 31.9 bits (69), Expect = 0.32
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 270 YHEAEESIEPTNHEIS-KNTRQATLEIYLQKIKKSNMEKNMRIEQEV 407
Y+E + T++EI+ KN R + LQ+I E N+RIEQE+
Sbjct: 818 YNEIARIKQLTHNEIALKNERSLNVSDLLQRINLLQTENNVRIEQEL 864
>U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate
filament, c protein2, isoform b protein.
Length = 1248
Score = 31.9 bits (69), Expect = 0.32
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 270 YHEAEESIEPTNHEIS-KNTRQATLEIYLQKIKKSNMEKNMRIEQEV 407
Y+E + T++EI+ KN R + LQ+I E N+RIEQE+
Sbjct: 818 YNEIARIKQLTHNEIALKNERSLNVSDLLQRINLLQTENNVRIEQEL 864
>Z50029-9|CAA90345.4| 1012|Caenorhabditis elegans Hypothetical
protein F46F6.2 protein.
Length = 1012
Score = 31.1 bits (67), Expect = 0.56
Identities = 22/89 (24%), Positives = 34/89 (38%)
Frame = +1
Query: 22 PVESTSMTDGTRNSSAEGSGWDSHRTTRKTLRQTFGKDFTPRKSLRALVMEKSAKRQTAL 201
P S+ GT +S S + T T F K F PRKS + ++ A+ A+
Sbjct: 559 PSSSSQHQPGTSSSGPSTSSSIASTPTPSTSNSLFDKSFNPRKSAK----KREAREAAAV 614
Query: 202 VDAKEISKMPQANSTEIPNLMMTTMKQRN 288
N+ N M + ++RN
Sbjct: 615 APMTAAVAAVNLNAPSTSNSMQPSTQERN 643
>Z50028-6|CAA90339.4| 1012|Caenorhabditis elegans Hypothetical
protein F46F6.2 protein.
Length = 1012
Score = 31.1 bits (67), Expect = 0.56
Identities = 22/89 (24%), Positives = 34/89 (38%)
Frame = +1
Query: 22 PVESTSMTDGTRNSSAEGSGWDSHRTTRKTLRQTFGKDFTPRKSLRALVMEKSAKRQTAL 201
P S+ GT +S S + T T F K F PRKS + ++ A+ A+
Sbjct: 559 PSSSSQHQPGTSSSGPSTSSSIASTPTPSTSNSLFDKSFNPRKSAK----KREAREAAAV 614
Query: 202 VDAKEISKMPQANSTEIPNLMMTTMKQRN 288
N+ N M + ++RN
Sbjct: 615 APMTAAVAAVNLNAPSTSNSMQPSTQERN 643
>Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical
protein F34D10.4 protein.
Length = 692
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +3
Query: 285 ESIEPTNHEI--SKNTRQATLEIYLQKIKKSNMEKNMRIEQE 404
ESIEPTN +I ++ + ++YL+K++K + + R+EQE
Sbjct: 538 ESIEPTNRKIETAEEREKKQNDLYLEKMRK--IREKQRLEQE 577
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 30.3 bits (65), Expect = 0.98
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 255 EFNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNME 380
EF YH+ E E +H+I++ T QA Y ++++KS E
Sbjct: 600 EFEIHYHQIRELAEQKDHQIAQLTEQA--NDYQERLEKSQSE 639
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 30.3 bits (65), Expect = 0.98
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 255 EFNDDYHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNME 380
EF YH+ E E +H+I++ T QA Y ++++KS E
Sbjct: 612 EFEIHYHQIRELAEQKDHQIAQLTEQA--NDYQERLEKSQSE 651
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 7 PSLLPPVESTSMTDGTRNSSAEGSGWDSHRTTRKTLRQTFGKDFTPRKSL 156
PS STS T T +S+ + S TTR+T T + TPRK++
Sbjct: 546 PSTTTSTTSTSTTSSTSSSAPIRAVRTSTPTTRRTTTTTPRRTTTPRKTI 595
>AC025724-2|AAG23378.2| 167|Caenorhabditis elegans Hypothetical
protein Y67D8C.4 protein.
Length = 167
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -2
Query: 446 HFVAWFHGFKGVSNFLFYSHVFLHVAFLYFLQIYF*GCLTSIFRYFMICWF 294
HFV+ F K + SH +A++ + ++F GCL+ F+ F+ WF
Sbjct: 96 HFVSRFLLRKHQARRTVISHGARMLAYIVCV-LHFSGCLSHFFKQFIFSWF 145
>Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical
protein F22B8.6 protein.
Length = 392
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 360 IKKSNMEKNMRIEQEVRNSLKAMKPCNKM*YFPSPCQAII 479
+KK ME + +V+N KA+KP KM +F SP ++
Sbjct: 115 VKKYGMEVDSVDLTDVQNLEKAIKPNTKMVWFESPSNPLL 154
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 255 EFNDDYHEAEESIEPTNHE--ISKNTRQATLEIYLQKIKK--SNMEKNMRIEQE-VRNSL 419
E D +E++ EPT + I++NTR T E +QK++K + + K +E+E L
Sbjct: 619 EPEDKVTSSEQTPEPTTSQKFIARNTRSKTKESAVQKVEKPATPVAKPAPVEKEPEERPL 678
Query: 420 KAM 428
K+M
Sbjct: 679 KSM 681
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 255 EFNDDYHEAEESIEPTNHE--ISKNTRQATLEIYLQKIKK--SNMEKNMRIEQE-VRNSL 419
E D +E++ EPT + I++NTR T E +QK++K + + K +E+E L
Sbjct: 619 EPEDKVTSSEQTPEPTTSQKFIARNTRSKTKESAVQKVEKPATPVAKPAPVEKEPEERPL 678
Query: 420 KAM 428
K+M
Sbjct: 679 KSM 681
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 348 YLQKIKKSNMEKNMRIEQEVRNSLKAMKPCNKM*YFPSPCQAIICKTSTNXF 503
Y Q K + EKN+R+ +R + +A K C+ PSP + I + N F
Sbjct: 482 YNQLAKDNFAEKNVRLN--LRMTERAPKNCSTQIVLPSPPRVIYVRKDINAF 531
>AF068709-10|AAC19252.2| 345|Caenorhabditis elegans Seven tm
receptor protein 33 protein.
Length = 345
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 191 CLLAD-FSITNARKDFRGVKSLPNVCRSVFLVVL*ESHPDPSALEFLVPSVILVLST 24
CL D +S R +F+ V ++ ++F++V E HP + SVI++ T
Sbjct: 155 CLFPDTYSYNYIRTEFKDVYNIGVDRVAIFILVAYEKHPSSEEYKLRPASVIMIAGT 211
>AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical
protein ZC581.3 protein.
Length = 691
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 225 NATSKFYRDPEFNDD--YHEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIE 398
NA Y D +++D YH+++ + PT +S TR + + K+ E N +E
Sbjct: 395 NAEYHDYTDHHYDEDHEYHDSDNTTHPTISVVSIETRLSESDSDADS-KEKQSEDNALVE 453
Query: 399 QEVRNSLKAMKPCN 440
+ L + P N
Sbjct: 454 VTTPDQLLNLTPPN 467
>Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.12 protein.
Length = 1080
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 19 PPVESTSMTDGTRNSSAEGSGWDSHRTTRKTLRQT 123
PP T+ T GT ++++ G+G S T T++ T
Sbjct: 1024 PPSTGTTQTSGTGSTASPGTGSTSQPVTATTVQAT 1058
>Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical protein
F23B2.12 protein.
Length = 1080
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 19 PPVESTSMTDGTRNSSAEGSGWDSHRTTRKTLRQT 123
PP T+ T GT ++++ G+G S T T++ T
Sbjct: 1024 PPSTGTTQTSGTGSTASPGTGSTSQPVTATTVQAT 1058
>Z37983-9|CAO82014.1| 227|Caenorhabditis elegans Hypothetical
protein B0393.9b protein.
Length = 227
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 102 CSSVRIPSRPLSTRISCPICHTC 34
C +V P +P ISC +CHTC
Sbjct: 23 CKTVICPKQP-GKLISCDMCHTC 44
>AL110485-10|CAB60358.2| 304|Caenorhabditis elegans Hypothetical
protein Y46G5A.15 protein.
Length = 304
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 154 LRALVMEKSAKR-QTALVDAKEISKMPQANSTEIPNLMMTTMKQRNQ 291
L + +K A+R + A ++ +EI+ PQ+ + ++T +QRNQ
Sbjct: 226 LARMEAQKMARRYEDAYIEDEEITLNPQSTPEPLEKKSISTSRQRNQ 272
>AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical
protein M01G5.1 protein.
Length = 889
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 255 EFNDDYHEAEESIEPTNHEISKNTRQATLE--IYLQKIKKSNMEKNMRIEQEVRNSLK 422
EF+D E++ E HEI+K R +E I L++++K E+ + E+ R K
Sbjct: 55 EFDDFLIESDFGDERMCHEIAKFKRIERVEAWIVLRELRKKQRERRLEAEKIAREIKK 112
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = +3
Query: 273 HEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNS 416
HE +E + ++E ++ + + E L+K+K+ ++ + EQE R +
Sbjct: 58 HENDEQAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEEREA 105
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = +3
Query: 273 HEAEESIEPTNHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNS 416
HE +E + ++E ++ + + E L+K+K+ ++ + EQE R +
Sbjct: 58 HENDEQAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEEREA 105
>Z78060-3|CAB01488.2| 215|Caenorhabditis elegans Hypothetical
protein C34D1.4 protein.
Length = 215
Score = 27.1 bits (57), Expect = 9.1
Identities = 22/69 (31%), Positives = 30/69 (43%)
Frame = -2
Query: 284 LCFMVVIIKFGISVEFACGILEISLASTSAVCLLADFSITNARKDFRGVKSLPNVCRSVF 105
L F VI+KF I G+ +SL+ TS + AR +FR ++ P V F
Sbjct: 69 LIFPSVIVKF-ICFSLCAGVAMLSLSETSI-----NMKTKEARMEFRRQRNYPEVVNIAF 122
Query: 104 LVVL*ESHP 78
E HP
Sbjct: 123 -----EDHP 126
>Z75536-1|CAE17805.1| 195|Caenorhabditis elegans Hypothetical
protein F18C12.4 protein.
Length = 195
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 82 WDSHRTTRKTLRQTFGKDFTPRKSLRALVMEKSAKRQTALVD 207
W +H +T + L +TF +DF P L + AK++ ++D
Sbjct: 141 WTNHVSTSQKLSETFERDFDP--VLEGMSDNDYAKKKKLILD 180
>Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical
protein F11A10.3 protein.
Length = 522
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 309 EISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRNSLK 422
E +KN + T+E L K++K + R EQE S++
Sbjct: 221 EEAKNRPKLTIEQKLAKLRKKKERRERRKEQEKEESMR 258
>Z54237-1|CAA90987.2| 445|Caenorhabditis elegans Hypothetical
protein T11B7.1 protein.
Length = 445
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +3
Query: 303 NHEISKNTRQATLEIYLQKIKKSNMEKNMRIEQEVRN 413
NHE SKN TL+ +++K+ ++ + I+Q+++N
Sbjct: 157 NHENSKNVNPLTLDELTEQLKQ--FKEELSIDQKLKN 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,165,139
Number of Sequences: 27780
Number of extensions: 246829
Number of successful extensions: 914
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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