BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0905 (558 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 24 1.2 AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 24 1.2 AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 24 1.2 DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 3.7 AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 4.8 AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 22 4.8 >AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice variant B protein. Length = 810 Score = 23.8 bits (49), Expect = 1.2 Identities = 9/32 (28%), Positives = 20/32 (62%) Frame = +3 Query: 315 SKNTRQATLEIYLQKIKKSNMEKNMRIEQEVR 410 S+N + +Q +KK ++E+ ++I +E+R Sbjct: 133 SENMTVTFANLGIQCVKKKDIEEALKIREEIR 164 >AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. Length = 602 Score = 23.8 bits (49), Expect = 1.2 Identities = 9/32 (28%), Positives = 20/32 (62%) Frame = +3 Query: 315 SKNTRQATLEIYLQKIKKSNMEKNMRIEQEVR 410 S+N + +Q +KK ++E+ ++I +E+R Sbjct: 133 SENMTVTFANLGIQCVKKKDIEEALKIREEIR 164 >AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera ORF for hypotheticalprotein. ). Length = 998 Score = 23.8 bits (49), Expect = 1.2 Identities = 7/19 (36%), Positives = 12/19 (63%) Frame = +3 Query: 243 YRDPEFNDDYHEAEESIEP 299 ++DP+ +H AEE+ P Sbjct: 518 FKDPKVESAFHNAEEAFSP 536 >DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine receptor beta1subunit protein. Length = 520 Score = 22.2 bits (45), Expect = 3.7 Identities = 7/18 (38%), Positives = 13/18 (72%) Frame = -2 Query: 467 AGTWKILHFVAWFHGFKG 414 +GTW I++ A+ + +KG Sbjct: 198 SGTWDIINVPAYLNTYKG 215 >AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine receptor protein. Length = 694 Score = 21.8 bits (44), Expect = 4.8 Identities = 10/43 (23%), Positives = 19/43 (44%) Frame = -2 Query: 332 LTSIFRYFMICWFD*FLCFMVVIIKFGISVEFACGILEISLAS 204 L + F+ICW F C ++ I ++ + G+ + S Sbjct: 621 LAIVLGVFLICWLPFFTCNIMDAICTKLTADCQPGVTAFIVTS 663 >AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective protein-1 protein. Length = 128 Score = 21.8 bits (44), Expect = 4.8 Identities = 7/14 (50%), Positives = 12/14 (85%) Frame = -2 Query: 260 KFGISVEFACGILE 219 K+GI++ ACGI++ Sbjct: 47 KYGIAMSSACGIVQ 60 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 141,212 Number of Sequences: 438 Number of extensions: 2890 Number of successful extensions: 9 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 16072521 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -