Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0898
         (598 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RFG7 Cluster: 1 beta dynein heavy chain; n=15; Plasmo...    34   2.9  
UniRef50_Q7MA97 Cluster: NRFI PROTEIN; n=1; Wolinella succinogen...    33   3.9  
UniRef50_A2FVG7 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  
UniRef50_Q5CUG9 Cluster: Putative acyl-CoA synthetases; n=1; Cry...    32   8.9  

>UniRef50_Q7RFG7 Cluster: 1 beta dynein heavy chain; n=15; Plasmodium
            (Vinckeia)|Rep: 1 beta dynein heavy chain - Plasmodium
            yoelii yoelii
          Length = 4507

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +1

Query: 445  NYYNYGFHLIIFINYLKLIKILFISIYISKEPYRRIWTNSYY 570
            N Y+Y FHL      +K I +   SIY  KE + R+W N  +
Sbjct: 1812 NCYHYFFHLKQIFKIIKGIFLSEASIYEEKESFLRLWANECF 1853


>UniRef50_Q7MA97 Cluster: NRFI PROTEIN; n=1; Wolinella
           succinogenes|Rep: NRFI PROTEIN - Wolinella succinogenes
          Length = 897

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 13/48 (27%), Positives = 29/48 (60%)
 Frame = +1

Query: 430 TGILQNYYNYGFHLIIFINYLKLIKILFISIYISKEPYRRIWTNSYYM 573
           TG + N++  G   +   +YL+  ++L+I+I++S +   ++W   +YM
Sbjct: 311 TGFVLNFFTQGSRFLYLKSYLQKSQLLWIAIFLSLDG-GKLWAEDFYM 357


>UniRef50_A2FVG7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 885

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +2

Query: 56  QPIKFSNSPYTNTNDTHIDDINLYINEISGELA 154
           QP KF NS   NTN+T  DD++  +++ + ++A
Sbjct: 185 QPAKFVNSVIPNTNETKNDDVSAVLSQTANKVA 217


>UniRef50_Q5CUG9 Cluster: Putative acyl-CoA synthetases; n=1;
           Cryptosporidium parvum Iowa II|Rep: Putative acyl-CoA
           synthetases - Cryptosporidium parvum Iowa II
          Length = 777

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -1

Query: 418 SSKTLVKIKSYSIFYDTNQ*RKLLVPRNSVAN*FNM-ARTAPKHFDYYTS 272
           SS  L+ I  YS  Y       + +  NS  N FNM     PKHF+Y++S
Sbjct: 362 SSSKLILIHKYSKVYWQILNETIKISINSYGNNFNMIVPLVPKHFEYFSS 411


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,579,600
Number of Sequences: 1657284
Number of extensions: 8499759
Number of successful extensions: 20658
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20655
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)