BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0897
(598 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY341235-1|AAR13799.1| 196|Anopheles gambiae transferrin-like p... 26 0.80
AY341234-1|AAR13798.1| 196|Anopheles gambiae transferrin-like p... 26 0.80
AY341232-1|AAR13796.1| 196|Anopheles gambiae transferrin-like p... 26 0.80
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 25 2.5
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 25 2.5
AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein. 23 7.5
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 23 7.5
U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase... 23 9.9
>AY341235-1|AAR13799.1| 196|Anopheles gambiae transferrin-like
protein.
Length = 196
Score = 26.2 bits (55), Expect = 0.80
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = +2
Query: 365 GTYEPNDDECLN---PWRDDTEE 424
GTY+ DDE LN P DD EE
Sbjct: 143 GTYQATDDEGLNTDSPLEDDAEE 165
>AY341234-1|AAR13798.1| 196|Anopheles gambiae transferrin-like
protein.
Length = 196
Score = 26.2 bits (55), Expect = 0.80
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = +2
Query: 365 GTYEPNDDECLN---PWRDDTEE 424
GTY+ DDE LN P DD EE
Sbjct: 143 GTYQATDDEGLNTDSPLEDDAEE 165
>AY341232-1|AAR13796.1| 196|Anopheles gambiae transferrin-like
protein.
Length = 196
Score = 26.2 bits (55), Expect = 0.80
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = +2
Query: 365 GTYEPNDDECLN---PWRDDTEE 424
GTY+ DDE LN P DD EE
Sbjct: 143 GTYQATDDEGLNTDSPLEDDAEE 165
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 2.5
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 173 HKSPSCRSDGIPTPECSSANPRLENSS 253
H S S S +PT +S PR SS
Sbjct: 49 HSSTSASSSSVPTLPTTSGEPRAAGSS 75
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 2.5
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 173 HKSPSCRSDGIPTPECSSANPRLENSS 253
H S S S +PT +S PR SS
Sbjct: 49 HSSTSASSSSVPTLPTTSGEPRAAGSS 75
>AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein.
Length = 458
Score = 23.0 bits (47), Expect = 7.5
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +2
Query: 161 DSGHHKSPSCRSDGIPTPECSSANPRLENSSEEFVDIEGKFYSE 292
DSG K S G+ EC + + S E + GK YS+
Sbjct: 77 DSGGPKKRHVSSTGMYNIECCTGDYCNNGSFPELPPMRGKTYSK 120
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 23.0 bits (47), Expect = 7.5
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 191 RSDGIPTPECSSAN-PRLENSSEEFVDIEGK 280
+ D + PECS + PR N E +D+E +
Sbjct: 73 KKDSVQIPECSVDDWPRAPN-PREIIDLEAR 102
>U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase
protein.
Length = 332
Score = 22.6 bits (46), Expect = 9.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 470 EEKKDDKAIEPPMXPM*XVXQTFGTTYSGCLNAQRNDA 583
EE+KD + + P+ + + FG + S NA R++A
Sbjct: 10 EERKDIQGLYRENVPIKTICKAFGRSRSFVDNAIRSEA 47
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,412
Number of Sequences: 2352
Number of extensions: 9404
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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