BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0897
(598 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M86667-1|AAC37544.1| 391|Homo sapiens NAP protein. 53 9e-07
BT007023-1|AAP35669.1| 391|Homo sapiens nucleosome assembly pro... 53 9e-07
BC002387-1|AAH02387.1| 391|Homo sapiens nucleosome assembly pro... 53 9e-07
U77456-1|AAC50870.1| 375|Homo sapiens nucleosome assembly prote... 36 0.14
BC022090-1|AAH22090.1| 375|Homo sapiens nucleosome assembly pro... 36 0.14
D50370-1|BAA08904.1| 506|Homo sapiens nucleosome assembly prote... 33 0.77
BC034954-1|AAH34954.1| 506|Homo sapiens nucleosome assembly pro... 33 0.77
AL009173-1|CAA15661.1| 506|Homo sapiens nucleosome assembly pro... 33 0.77
AK223621-1|BAD97341.1| 506|Homo sapiens nucleosome assembly pro... 33 0.77
CR457095-1|CAG33376.1| 460|Homo sapiens NAP1L2 protein. 31 2.3
BC026325-1|AAH26325.1| 460|Homo sapiens nucleosome assembly pro... 31 2.3
AF136178-1|AAP97268.1| 460|Homo sapiens nucleosome assembly pro... 31 2.3
AB027013-1|BAA84706.1| 460|Homo sapiens Nucleosome Assembly Pro... 31 2.3
BC030530-1|AAH30530.1| 617|Homo sapiens synovial apoptosis inhi... 30 5.4
AK074148-1|BAB84974.1| 298|Homo sapiens FLJ00221 protein protein. 30 5.4
AF317634-1|AAL26903.1| 616|Homo sapiens HRD1 protein. 30 5.4
AB085847-1|BAC24801.1| 616|Homo sapiens HRD1 protein. 30 5.4
AB058713-1|BAB47439.1| 579|Homo sapiens KIAA1810 protein protein. 30 5.4
AB024690-1|BAC57449.1| 617|Homo sapiens Synoviolin1 protein. 30 5.4
>M86667-1|AAC37544.1| 391|Homo sapiens NAP protein.
Length = 391
Score = 52.8 bits (121), Expect = 9e-07
Identities = 31/92 (33%), Positives = 46/92 (50%)
Frame = +2
Query: 239 LENSSEEFVDIEGKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDT 418
L+N + IE KFY EVH R I+N YEP ++EC W+ D
Sbjct: 81 LKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEEC--EWKPD- 137
Query: 419 EEEELAXAVQNAAITEGEEKKDDKAIEPPMXP 514
EE+E++ ++ A E +EKKD++ +P P
Sbjct: 138 EEDEISEELKEKAKIE-DEKKDEEKEDPKGIP 168
>BT007023-1|AAP35669.1| 391|Homo sapiens nucleosome assembly
protein 1-like 2 protein.
Length = 391
Score = 52.8 bits (121), Expect = 9e-07
Identities = 31/92 (33%), Positives = 46/92 (50%)
Frame = +2
Query: 239 LENSSEEFVDIEGKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDT 418
L+N + IE KFY EVH R I+N YEP ++EC W+ D
Sbjct: 81 LKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEEC--EWKPD- 137
Query: 419 EEEELAXAVQNAAITEGEEKKDDKAIEPPMXP 514
EE+E++ ++ A E +EKKD++ +P P
Sbjct: 138 EEDEISEELKEKAKIE-DEKKDEEKEDPKGIP 168
>BC002387-1|AAH02387.1| 391|Homo sapiens nucleosome assembly
protein 1-like 1 protein.
Length = 391
Score = 52.8 bits (121), Expect = 9e-07
Identities = 31/92 (33%), Positives = 46/92 (50%)
Frame = +2
Query: 239 LENSSEEFVDIEGKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDT 418
L+N + IE KFY EVH R I+N YEP ++EC W+ D
Sbjct: 81 LKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEEC--EWKPD- 137
Query: 419 EEEELAXAVQNAAITEGEEKKDDKAIEPPMXP 514
EE+E++ ++ A E +EKKD++ +P P
Sbjct: 138 EEDEISEELKEKAKIE-DEKKDEEKEDPKGIP 168
>U77456-1|AAC50870.1| 375|Homo sapiens nucleosome assembly protein
2 protein.
Length = 375
Score = 35.5 bits (78), Expect = 0.14
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +2
Query: 269 IEGKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDTEEEE-LAXAV 445
IE KFY EVH R + G EP D E + W + EEEE LA +
Sbjct: 80 IEAKFYEEVHDLERKYAALYQPLFDKRREFITGDVEPTDAE--SEWHSENEEEEKLAGDM 137
Query: 446 QNAAITEGEEKKDDKAIEP 502
++ + EK A EP
Sbjct: 138 KSKVVV--TEKAAATAEEP 154
>BC022090-1|AAH22090.1| 375|Homo sapiens nucleosome assembly
protein 1-like 4 protein.
Length = 375
Score = 35.5 bits (78), Expect = 0.14
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +2
Query: 269 IEGKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDTEEEE-LAXAV 445
IE KFY EVH R + G EP D E + W + EEEE LA +
Sbjct: 80 IEAKFYEEVHDLERKYAALYQPLFDKRREFITGDVEPTDAE--SEWHSENEEEEKLAGDM 137
Query: 446 QNAAITEGEEKKDDKAIEP 502
++ + EK A EP
Sbjct: 138 KSKVVV--TEKAAATAEEP 154
>D50370-1|BAA08904.1| 506|Homo sapiens nucleosome assembly protein
protein.
Length = 506
Score = 33.1 bits (72), Expect = 0.77
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Frame = +2
Query: 239 LENSSEEFVDIEGKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDT 418
L N +E ++ F +H R I+N YEP ++EC W +
Sbjct: 111 LRNIQDECDKVDTLFLKAIHDLERKYAELNKPLYDRRFQIINAEYEPTEEEC--EWNSED 168
Query: 419 EEEELAXAVQNAAIT-----EGEEKKDDK 490
EE VQ+ + EGEE+++ K
Sbjct: 169 EEFSSDEEVQDNTPSEMPPLEGEEEENPK 197
>BC034954-1|AAH34954.1| 506|Homo sapiens nucleosome assembly
protein 1-like 3 protein.
Length = 506
Score = 33.1 bits (72), Expect = 0.77
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Frame = +2
Query: 239 LENSSEEFVDIEGKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDT 418
L N +E ++ F +H R I+N YEP ++EC W +
Sbjct: 111 LRNIQDECDKVDTLFLKAIHDLERKYAELNKPLYDRRFQIINAEYEPTEEEC--EWNSED 168
Query: 419 EEEELAXAVQNAAIT-----EGEEKKDDK 490
EE VQ+ + EGEE+++ K
Sbjct: 169 EEFSSDEEVQDNTPSEMPPLEGEEEENPK 197
>AL009173-1|CAA15661.1| 506|Homo sapiens nucleosome assembly
protein 1-like 3 protein.
Length = 506
Score = 33.1 bits (72), Expect = 0.77
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Frame = +2
Query: 239 LENSSEEFVDIEGKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDT 418
L N +E ++ F +H R I+N YEP ++EC W +
Sbjct: 111 LRNIQDECDKVDTLFLKAIHDLERKYAELNKPLYDRRFQIINAEYEPTEEEC--EWNSED 168
Query: 419 EEEELAXAVQNAAIT-----EGEEKKDDK 490
EE VQ+ + EGEE+++ K
Sbjct: 169 EEFSSDEEVQDNTPSEMPPLEGEEEENPK 197
>AK223621-1|BAD97341.1| 506|Homo sapiens nucleosome assembly
protein 1-like 3 variant protein.
Length = 506
Score = 33.1 bits (72), Expect = 0.77
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Frame = +2
Query: 239 LENSSEEFVDIEGKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDT 418
L N +E ++ F +H R I+N YEP ++EC W +
Sbjct: 111 LRNIQDECDKVDTLFLKAIHDLERKYAELNKPLYDRRFQIINAEYEPTEEEC--EWNSED 168
Query: 419 EEEELAXAVQNAAIT-----EGEEKKDDK 490
EE VQ+ + EGEE+++ K
Sbjct: 169 EEFSSDEEVQDNTPSEMPPLEGEEEENPK 197
>CR457095-1|CAG33376.1| 460|Homo sapiens NAP1L2 protein.
Length = 460
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +2
Query: 266 DIEGKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDEC-LNPWRDDTEEEEL 433
++E KF E H R I+N YEP ++EC +D ++EE+
Sbjct: 124 NLESKFLREFHDIERKFAEMYQPLLEKRRQIINAIYEPTEEECEYKSDSEDCDDEEM 180
>BC026325-1|AAH26325.1| 460|Homo sapiens nucleosome assembly
protein 1-like 2 protein.
Length = 460
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +2
Query: 266 DIEGKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDEC-LNPWRDDTEEEEL 433
++E KF E H R I+N YEP ++EC +D ++EE+
Sbjct: 124 NLESKFLREFHDIERKFAEMYQPLLEKRRQIINAIYEPTEEECEYKSDSEDCDDEEM 180
>AF136178-1|AAP97268.1| 460|Homo sapiens nucleosome assembly
protein Bpx protein.
Length = 460
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +2
Query: 266 DIEGKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDEC-LNPWRDDTEEEEL 433
++E KF E H R I+N YEP ++EC +D ++EE+
Sbjct: 124 NLESKFLREFHDIERKFAEMYQPLLEKRRQIINAIYEPTEEECEYKSDSEDCDDEEM 180
>AB027013-1|BAA84706.1| 460|Homo sapiens Nucleosome Assembly
Protein 1-like 2 protein.
Length = 460
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +2
Query: 266 DIEGKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDEC-LNPWRDDTEEEEL 433
++E KF E H R I+N YEP ++EC +D ++EE+
Sbjct: 124 NLESKFLREFHDIERKFAEMYQPLLEKRRQIINAIYEPTEEECEYKSDSEDCDDEEM 180
>BC030530-1|AAH30530.1| 617|Homo sapiens synovial apoptosis
inhibitor 1, synoviolin protein.
Length = 617
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 323 VFHI-CIRVHVLHCKTCPQCRQTPLKSSQGADSP 225
+FH C+R +TCP CR L++S A SP
Sbjct: 310 IFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSP 343
>AK074148-1|BAB84974.1| 298|Homo sapiens FLJ00221 protein protein.
Length = 298
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 323 VFHI-CIRVHVLHCKTCPQCRQTPLKSSQGADSP 225
+FH C+R +TCP CR L++S A SP
Sbjct: 179 IFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSP 212
>AF317634-1|AAL26903.1| 616|Homo sapiens HRD1 protein.
Length = 616
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 323 VFHI-CIRVHVLHCKTCPQCRQTPLKSSQGADSP 225
+FH C+R +TCP CR L++S A SP
Sbjct: 310 IFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSP 343
>AB085847-1|BAC24801.1| 616|Homo sapiens HRD1 protein.
Length = 616
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 323 VFHI-CIRVHVLHCKTCPQCRQTPLKSSQGADSP 225
+FH C+R +TCP CR L++S A SP
Sbjct: 310 IFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSP 343
>AB058713-1|BAB47439.1| 579|Homo sapiens KIAA1810 protein protein.
Length = 579
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 323 VFHI-CIRVHVLHCKTCPQCRQTPLKSSQGADSP 225
+FH C+R +TCP CR L++S A SP
Sbjct: 273 IFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSP 306
>AB024690-1|BAC57449.1| 617|Homo sapiens Synoviolin1 protein.
Length = 617
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 323 VFHI-CIRVHVLHCKTCPQCRQTPLKSSQGADSP 225
+FH C+R +TCP CR L++S A SP
Sbjct: 310 IFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSP 343
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,828,214
Number of Sequences: 237096
Number of extensions: 1466049
Number of successful extensions: 3149
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3134
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -