Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0894
(369 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p pro... 105 1e-23
AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB... 105 1e-23
AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA... 105 1e-23
U03289-1|AAA03464.1| 113|Drosophila melanogaster protein ( Dros... 103 7e-23
AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p pro... 28 4.4
AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC... 28 4.4
AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB... 28 4.4
AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA... 28 4.4
>AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p
protein.
Length = 117
Score = 105 bits (253), Expect = 1e-23
Identities = 55/89 (61%), Positives = 60/89 (67%)
Frame = +2
Query: 2 KDAKASAKQPQKTQXXXXXXXXXXXXXXXXXXXXVRDKLNNQVLFDKPXYEKLYKXVPQY 181
KDAK+SAKQPQKTQ VRDKLNNQVLFDK YEKLYK VP Y
Sbjct: 5 KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 64
Query: 182 KLITPAVXSERXKXRGSLARRALIDXGER 268
KLITP+V SER K RGSLA+RALI+ E+
Sbjct: 65 KLITPSVVSERLKIRGSLAKRALIELREK 93
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 264 KGLIKQXVQHHXQVIYTRXXKGDD 335
KGLIKQ VQHH QVIYTR KGD+
Sbjct: 93 KGLIKQVVQHHSQVIYTRATKGDE 116
>AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB,
isoform B protein.
Length = 117
Score = 105 bits (253), Expect = 1e-23
Identities = 55/89 (61%), Positives = 60/89 (67%)
Frame = +2
Query: 2 KDAKASAKQPQKTQXXXXXXXXXXXXXXXXXXXXVRDKLNNQVLFDKPXYEKLYKXVPQY 181
KDAK+SAKQPQKTQ VRDKLNNQVLFDK YEKLYK VP Y
Sbjct: 5 KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 64
Query: 182 KLITPAVXSERXKXRGSLARRALIDXGER 268
KLITP+V SER K RGSLA+RALI+ E+
Sbjct: 65 KLITPSVVSERLKIRGSLAKRALIELREK 93
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 264 KGLIKQXVQHHXQVIYTRXXKGDD 335
KGLIKQ VQHH QVIYTR KGD+
Sbjct: 93 KGLIKQVVQHHSQVIYTRATKGDE 116
>AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA,
isoform A protein.
Length = 117
Score = 105 bits (253), Expect = 1e-23
Identities = 55/89 (61%), Positives = 60/89 (67%)
Frame = +2
Query: 2 KDAKASAKQPQKTQXXXXXXXXXXXXXXXXXXXXVRDKLNNQVLFDKPXYEKLYKXVPQY 181
KDAK+SAKQPQKTQ VRDKLNNQVLFDK YEKLYK VP Y
Sbjct: 5 KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 64
Query: 182 KLITPAVXSERXKXRGSLARRALIDXGER 268
KLITP+V SER K RGSLA+RALI+ E+
Sbjct: 65 KLITPSVVSERLKIRGSLAKRALIELREK 93
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 264 KGLIKQXVQHHXQVIYTRXXKGDD 335
KGLIKQ VQHH QVIYTR KGD+
Sbjct: 93 KGLIKQVVQHHSQVIYTRATKGDE 116
>U03289-1|AAA03464.1| 113|Drosophila melanogaster protein (
Drosophila melanogasterSevelin ribosomal protein homolog
gene, partial cds. ).
Length = 113
Score = 103 bits (247), Expect = 7e-23
Identities = 54/89 (60%), Positives = 59/89 (66%)
Frame = +2
Query: 2 KDAKASAKQPQKTQXXXXXXXXXXXXXXXXXXXXVRDKLNNQVLFDKPXYEKLYKXVPQY 181
KDAK+SAKQPQKTQ VRDKLNNQVLFDK YEKLYK VP Y
Sbjct: 1 KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 60
Query: 182 KLITPAVXSERXKXRGSLARRALIDXGER 268
KLITP+V SER K RGSL +RALI+ E+
Sbjct: 61 KLITPSVVSERLKIRGSLDKRALIELREK 89
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 264 KGLIKQXVQHHXQVIYTRXXKGDD 335
KGLIKQ VQHH QVIYTR KGD+
Sbjct: 89 KGLIKQVVQHHSQVIYTRATKGDE 112
>AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p
protein.
Length = 607
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 9 RRLRPNSLKKHRRRRKDPVAAKPRRRSGP 95
R P+S + R R+ P++ PRRRS P
Sbjct: 124 RSRSPHSRSRSRLRKSPPLSPPPRRRSPP 152
>AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC,
isoform C protein.
Length = 567
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 9 RRLRPNSLKKHRRRRKDPVAAKPRRRSGP 95
R P+S + R R+ P++ PRRRS P
Sbjct: 84 RSRSPHSRSRSRLRKSPPLSPPPRRRSPP 112
>AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB,
isoform B protein.
Length = 607
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 9 RRLRPNSLKKHRRRRKDPVAAKPRRRSGP 95
R P+S + R R+ P++ PRRRS P
Sbjct: 124 RSRSPHSRSRSRLRKSPPLSPPPRRRSPP 152
>AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA,
isoform A protein.
Length = 607
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 9 RRLRPNSLKKHRRRRKDPVAAKPRRRSGP 95
R P+S + R R+ P++ PRRRS P
Sbjct: 124 RSRSPHSRSRSRLRKSPPLSPPPRRRSPP 152
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,236,757
Number of Sequences: 53049
Number of extensions: 201351
Number of successful extensions: 562
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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