Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0893
         (448 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   2.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   3.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   5.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   9.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   9.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   9.3  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 189 IRRTPSARTVESRQRSLSXYP 127
           I RTP    +  R+R L  YP
Sbjct: 48  IMRTPEQMFLADRERGLKYYP 68


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 189 IRRTPSARTVESRQRSLSXYP 127
           I RTP    +  R+R L  YP
Sbjct: 48  IMRTPEQLFLAERERGLKYYP 68


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +1

Query: 64   NRIRNRGSVGVYLIPXSVSSIWVXXERPLTTFH 162
            +++   G+    L+P   +   V   RP TT+H
Sbjct: 936  SKVSWEGNTERVLVPGDQTEAGVFTLRPATTYH 968


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 296 PFHVIRINKMLSCAG 340
           P H +R+N ++S +G
Sbjct: 376 PVHPVRVNTIISFSG 390


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 296 PFHVIRINKMLSCAG 340
           P H +R+N ++S +G
Sbjct: 376 PVHPVRVNTIISFSG 390


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 182 GHQVHXQWKVVN 147
           GH +H Q  VVN
Sbjct: 327 GHHIHAQHHVVN 338


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,501
Number of Sequences: 336
Number of extensions: 1834
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)