Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0893
         (448 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical pr...   117   3e-27
AC024826-3|AAP13746.1|  343|Caenorhabditis elegans Hypothetical ...    28   3.6  
AC024826-2|AAF60798.1|  413|Caenorhabditis elegans Hypothetical ...    28   3.6  
Z66511-7|CAD57693.1|  567|Caenorhabditis elegans Hypothetical pr...    27   6.2  

>Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical
           protein F10B5.1 protein.
          Length = 214

 Score =  117 bits (282), Expect = 3e-27
 Identities = 53/75 (70%), Positives = 57/75 (76%)
 Frame = +3

Query: 30  RPARCYRYCKXXPYPKSRFCRGVPDPKXRIFDLGXXRATVDDFPLXVHLVSDEYEQLXSX 209
           RPARCYRY K  PYPKSRFCRGVPD K RIFDLG  RA VD FP  VH++S+E E L S 
Sbjct: 4   RPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHLSSE 63

Query: 210 ALXAGRICCNKYLVK 254
           AL A RIC NKY+VK
Sbjct: 64  ALEAARICANKYMVK 78



 Score =  106 bits (254), Expect = 8e-24
 Identities = 47/62 (75%), Positives = 53/62 (85%)
 Frame = +2

Query: 251 KDCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTXMRGAFGKPQGTVARVRIGQXILS 430
           K+CGKD FH+R+R HPFHV RINKMLSCAGADRLQT MRGA+GKPQG VARV IG  + S
Sbjct: 78  KNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGKPQGLVARVDIGDILFS 137

Query: 431 VR 436
           +R
Sbjct: 138 MR 139


>AC024826-3|AAP13746.1|  343|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.6b protein.
          Length = 343

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +1

Query: 361 DAWCVWQASGYCSTCSHWTAHPVRA 435
           D  C +    YC  C  W+ HP  A
Sbjct: 157 DMDCPFAHGNYCDMCQQWSLHPYNA 181


>AC024826-2|AAF60798.1|  413|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.6a protein.
          Length = 413

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +1

Query: 361 DAWCVWQASGYCSTCSHWTAHPVRA 435
           D  C +    YC  C  W+ HP  A
Sbjct: 157 DMDCPFAHGNYCDMCQQWSLHPYNA 181


>Z66511-7|CAD57693.1|  567|Caenorhabditis elegans Hypothetical
           protein F07A11.6d protein.
          Length = 567

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -1

Query: 445 VTRAHGQDXLSNANTCYSTLRLAKRTTHPSLEPISSSA 332
           VT A   + LSN  T  ST  LA   T  +L P+S  A
Sbjct: 49  VTTASTPNPLSNLETLLSTASLANLATGGALNPLSMLA 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,495,664
Number of Sequences: 27780
Number of extensions: 168589
Number of successful extensions: 361
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)