Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0888
(409 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935... 42 2e-04
05_03_0604 - 16132173-16132391,16132488-16132556,16132824-161328... 41 3e-04
08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546 38 0.002
08_01_0027 - 195321-195932,197206-197415 38 0.003
08_02_1308 - 26024491-26025405 37 0.005
06_01_1008 - 7853089-7854147 37 0.007
08_01_0801 - 7750548-7751708 36 0.016
08_01_0797 + 7711772-7712869 35 0.022
10_08_0119 - 14952786-14953931,14954709-14954831 35 0.029
07_01_1036 + 9021395-9021658,9024214-9024690 34 0.038
10_08_0059 + 14529885-14530991 33 0.087
08_02_1310 - 26037025-26038074 33 0.12
08_02_1251 - 25592537-25593380,25593589-25593893 33 0.12
04_03_0991 - 21500143-21500799,21500834-21501172 33 0.12
10_08_0129 - 15025076-15025858,15025951-15026283 31 0.47
10_08_0122 - 14982676-14983043,14983957-14985145 31 0.47
04_03_0990 - 21481459-21481933,21482140-21482771 31 0.47
08_02_1304 - 26008105-26009070 30 0.81
10_08_0118 + 14948636-14949667,14949893-14949953,14951226-14951977 29 1.1
10_08_0125 - 15000650-15001717 29 1.9
09_04_0560 - 18519024-18519145,18519330-18519435,18519671-185199... 29 1.9
08_01_0802 - 7754561-7755628 28 2.5
04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072 28 3.3
08_01_0834 + 8118681-8118847,8119133-8119250,8119387-8119623 27 4.3
>07_03_1529 +
27491963-27492465,27493045-27493154,27493384-27493510,
27494082-27494430,27494975-27495251,27496236-27496333,
27498090-27498214,27498270-27498326,27498328-27498370,
27498581-27498667,27498802-27498882,27499735-27499901,
27499987-27500098,27500188-27500390,27500473-27500607,
27501106-27501205
Length = 857
Score = 41.5 bits (93), Expect = 2e-04
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Frame = +2
Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGXI-ATHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFL 340
+NMS LL+ G D+T +G + HK+VL+ SP F+ ++F M + +
Sbjct: 295 SNMSQHIGQLLTDGKRTDITFEVDGEVFPAHKVVLAARSPVFRAQLFGPMKDKNMKRITI 354
Query: 341 KDVSHSALRDLLQFMYQGEV 400
+D+ S + LL FMY E+
Sbjct: 355 EDMEASVFKALLHFMYWDEL 374
>05_03_0604 -
16132173-16132391,16132488-16132556,16132824-16132898,
16132981-16133113,16133188-16133297,16133360-16133407,
16133657-16133983,16135006-16135233,16135360-16135689,
16135780-16136586
Length = 781
Score = 41.1 bits (92), Expect = 3e-04
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +2
Query: 200 LSRGDLVDVTLAAEGX-IATH--KLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSAL 364
L G+ DV + G + TH KL+LS+ S F +MF M + VF +DV A
Sbjct: 344 LVNGEHSDVNIYVNGHGLVTHAHKLILSLWSMTFDKMFTNGMKESSASNVFFEDVPVEAF 403
Query: 365 RDLLQFMYQGEVNV 406
L+QFMY GE+ V
Sbjct: 404 FLLIQFMYSGELKV 417
>08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546
Length = 290
Score = 38.3 bits (85), Expect = 0.002
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +2
Query: 170 ANMSAGFHGLLSRGDLVDVTL-AAEGXIATHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFL 340
++++A LL + DVT E A HK+VL++ SP F+ E+F M ++ +
Sbjct: 103 SDIAAHLGKLLESKEAADVTFYVGEDTFAAHKVVLAMRSPVFKAELFGPMREAGAQVLPI 162
Query: 341 KDVSHSALRDLLQFMYQGEVNV 406
KD+ + LL F+Y +++
Sbjct: 163 KDIQPDVFKALLHFIYTDSLSI 184
>08_01_0027 - 195321-195932,197206-197415
Length = 273
Score = 37.9 bits (84), Expect = 0.003
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +2
Query: 110 ESSLSMASDEQFSLCWNNFHANMSAG-FHGLLSRGDLVDVTL-AAEGXIATHKLVLSVCS 283
ESS S+ +E S+ N + S G +L+ DVT+ +G + HK +L+ CS
Sbjct: 73 ESSTSIWPNE--SIAVQNIASKSSLGCLSRMLTESIHADVTINTTDGVLKAHKAILASCS 130
Query: 284 PYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMY 388
P F+ MF + + + + D+ + L+ F+Y
Sbjct: 131 PVFESMFLHDLKEKESSTININDMCLESCSALIGFIY 167
>08_02_1308 - 26024491-26025405
Length = 304
Score = 37.1 bits (82), Expect = 0.005
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +2
Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEG-XIATHKLVLSVCSPYFQE--MFKMNPTQHPIVFL 340
+++ A GLL RG+ DV+ +G H+ VL+ SP F+ + M ++ + L
Sbjct: 112 SDIGAHLGGLLDRGEGTDVSFLVDGETFPAHRAVLAARSPVFRAELLGSMAESKMSSITL 171
Query: 341 KDVSHSALRDLLQFMY 388
D+ R LL+F+Y
Sbjct: 172 HDIEPLTFRALLRFIY 187
>06_01_1008 - 7853089-7854147
Length = 352
Score = 36.7 bits (81), Expect = 0.007
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 197 LLSRGDLVDVTLAAEGXIATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRD 370
L +G V +A E +A HK++L+ SP F F M + V +KD+ S +
Sbjct: 172 LSEKGADVTFVVAGESFLA-HKIILAARSPVFMAEFFGPMKESSSQCVEIKDIEASVFKA 230
Query: 371 LLQFMYQG 394
+L F+Y G
Sbjct: 231 MLHFIYTG 238
>08_01_0801 - 7750548-7751708
Length = 386
Score = 35.5 bits (78), Expect = 0.016
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +2
Query: 188 FHGLLSRGDLVDVTLAAEGX-IATHKLVLSVCSPYFQ-EMFKM--NPTQHPIVFLKDVSH 355
F LL + DVT G + HKLVL++ SP F+ E+ + P PI + D+
Sbjct: 191 FANLLQSKEGADVTFDVAGEPFSVHKLVLAMRSPVFKAELCGLLREPGTQPITIV-DMQP 249
Query: 356 SALRDLLQFMYQGEVNV 406
+ R LLQF+Y + V
Sbjct: 250 AVFRALLQFIYTDQFPV 266
>08_01_0797 + 7711772-7712869
Length = 365
Score = 35.1 bits (77), Expect = 0.022
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 170 ANMSAGFHGLLSRGDLV--DVTLAAEGX-IATHKLVLSVCSPYFQEMF--KMNPTQHPIV 334
+ +S F LL + V DV + EG A HKLVL+ SP F+ F +M +
Sbjct: 174 SELSEHFGKLLEEEEDVGRDVVFSVEGESFAAHKLVLAARSPVFKAEFYGEMIERGTFSI 233
Query: 335 FLKDVSHSALRDLLQFMY 388
+KD+ S R LL F+Y
Sbjct: 234 DIKDMQPSVFRALLHFIY 251
>10_08_0119 - 14952786-14953931,14954709-14954831
Length = 422
Score = 34.7 bits (76), Expect = 0.029
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +2
Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGX-IATHKLVLSVCSPYFQ-EMFK-MNPTQHPIVFL 340
+NM + LLS + DV G A H+LVL+ SP F+ E+FK M ++ +
Sbjct: 233 SNMHMDYGDLLSSKEGTDVEFVVGGETFAAHRLVLAARSPVFKAELFKPMEEGTTDVIKI 292
Query: 341 KDVSHSALRDLLQFMY 388
++ + LL F+Y
Sbjct: 293 DNMDAQVFKALLVFIY 308
>07_01_1036 + 9021395-9021658,9024214-9024690
Length = 246
Score = 34.3 bits (75), Expect = 0.038
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGE 397
+ H+++L+ SP F+ M + M ++ I+ + DVS+ LR + +MY E
Sbjct: 81 VPAHRVILASRSPVFRAMLENEMEESRSGIIKIYDVSYDVLRAFVHYMYTAE 132
>10_08_0059 + 14529885-14530991
Length = 368
Score = 33.1 bits (72), Expect = 0.087
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Frame = +2
Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGX------IATHKLVLSVCSPYFQ-EMFKMNPTQH- 325
++M F LL+ GD DV G +A H++VL+ SP F+ E+ P +
Sbjct: 180 SDMRRHFGDLLASGDGADVEFRVRGAGGEEETVAAHRVVLAARSPVFKAELLAGVPAKDG 239
Query: 326 --PIVFLKDVSHSALRDLLQFMY 388
++ + D+ R LL +MY
Sbjct: 240 GGAVIQIDDMDAEVFRSLLHYMY 262
>08_02_1310 - 26037025-26038074
Length = 349
Score = 32.7 bits (71), Expect = 0.12
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 212 DLVDVTLAAEGX-IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQF 382
D DV L G H+ VL+ SP F+ M P V L+D+ +A R +L F
Sbjct: 177 DTADVALVVGGETFRAHRAVLAARSPVFKAALFGSMAEATAPSVALRDMDPAAFRAVLHF 236
Query: 383 MY 388
+Y
Sbjct: 237 IY 238
>08_02_1251 - 25592537-25593380,25593589-25593893
Length = 382
Score = 32.7 bits (71), Expect = 0.12
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALRDLLQFMYQGE 397
H+ +L+VCSP F+ + + + + L D+ + LL FMY G+
Sbjct: 238 HRALLAVCSPVFKALLLSSTAEAAACSITLNDIKPAMFEALLHFMYTGD 286
>04_03_0991 - 21500143-21500799,21500834-21501172
Length = 331
Score = 32.7 bits (71), Expect = 0.12
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Frame = +2
Query: 194 GLLSRGDLVDVTLAAEGX-IATHKLVLSVCSPYFQ-EMF----KMNPT-----QHPIVFL 340
GLL+ G+ DVT G A H+LVL+ SP F+ E+F ++ T H + +
Sbjct: 168 GLLATGEGADVTFEVSGKTFAAHRLVLAARSPVFRAELFGPSKELGATTGGAVDHTAIRI 227
Query: 341 KDVSHSALRDLLQFMY 388
D+ LL++MY
Sbjct: 228 DDMEARDFEALLRYMY 243
>10_08_0129 - 15025076-15025858,15025951-15026283
Length = 371
Score = 30.7 bits (66), Expect = 0.47
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +2
Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGX-IATHKLVLSVCSPYF-QEMF---KMNPTQHPIV 334
++M + LLS DV G A H+LVL+V SP F E F K + ++
Sbjct: 151 SDMHLHYGDLLSSKRCADVEFLVGGETFAAHRLVLAVRSPVFVAEHFGPMKEGVNVNDVI 210
Query: 335 FLKDVSHSALRDLLQFMY 388
+ D+ + LL F+Y
Sbjct: 211 EINDMDAQVFKALLNFIY 228
>10_08_0122 - 14982676-14983043,14983957-14985145
Length = 518
Score = 30.7 bits (66), Expect = 0.47
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +2
Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGX-IATHKLVLSVCSPYF-QEMF---KMNPTQHPIV 334
++M + LLS DV G A H+LVL+V SP F E F K + ++
Sbjct: 179 SDMHLHYGDLLSSKRCADVEFLVGGETFAAHRLVLAVRSPVFVAEHFGPMKEGVNVNDVI 238
Query: 335 FLKDVSHSALRDLLQFMY 388
+ D+ + LL F+Y
Sbjct: 239 EINDMDAQVFKALLNFIY 256
>04_03_0990 - 21481459-21481933,21482140-21482771
Length = 368
Score = 30.7 bits (66), Expect = 0.47
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 194 GLLSRGDLVDVTLAAEG-XIATHKLVLSVCSPYFQ 295
GLL+ G+ DVT EG A H+ VL+ SP F+
Sbjct: 188 GLLATGEGADVTFEVEGKTFAAHRWVLAARSPVFR 222
>08_02_1304 - 26008105-26009070
Length = 321
Score = 29.9 bits (64), Expect = 0.81
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 257 HKLVLSVCSPYFQE--MFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVK 409
H+ VL+ SP F+ + M P V L+D+ + R LL F+Y + ++
Sbjct: 168 HRAVLAARSPVFRAELLGSMAEATMPCVTLRDIEPATFRALLHFVYTDVLQIE 220
>10_08_0118 + 14948636-14949667,14949893-14949953,14951226-14951977
Length = 614
Score = 29.5 bits (63), Expect = 1.1
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGXI-ATHKLVLSVCSPYFQ-EMFKMNPTQH---PIV 334
+NM F LL + DV G + A H+LVL+ SP F+ E+F PT+ ++
Sbjct: 174 SNMHLHFVDLLVSKEGTDVKFLVGGEMFAAHRLVLAARSPVFKAELF--GPTKKGTIDVI 231
Query: 335 FLKDVSHSALRDLLQFMY 388
+ ++ + LL F+Y
Sbjct: 232 QIDNMEARVFKALLDFIY 249
>10_08_0125 - 15000650-15001717
Length = 355
Score = 28.7 bits (61), Expect = 1.9
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGXI-ATHKLVLSVCSPYFQ-EMFKMNPTQH---PIV 334
+NM F LL + DV G + A H+LVL+ SP F+ E+F PT+ +
Sbjct: 159 SNMHLYFGDLLVSKEGTDVKFLVGGEMFAAHRLVLAARSPVFKAELF--GPTKKGTIDAI 216
Query: 335 FLKDVSHSALRDLLQFMY 388
+ ++ + LL+F+Y
Sbjct: 217 QIDNMEARVFKALLEFIY 234
>09_04_0560 -
18519024-18519145,18519330-18519435,18519671-18519907,
18521371-18521810,18523215-18525012
Length = 900
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 116 SLSMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGXIATHKLVLSVCSPYFQ 295
SLS+ Q W + S GF GL S+ + V+ +A+ ++H +C P +
Sbjct: 750 SLSIEQQRQLLFFWTSVKYLPSDGFGGLASKLYIYKVSESADRLPSSHTCFYRLCLPAYP 809
Query: 296 EM 301
+
Sbjct: 810 SL 811
>08_01_0802 - 7754561-7755628
Length = 355
Score = 28.3 bits (60), Expect = 2.5
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +2
Query: 170 ANMSAGFHGLLSRGDLVDVTLAAEGX-IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFL 340
+NM LL + DV G HKLVL++ SP F+ M + + +
Sbjct: 179 SNMMQQLGDLLESKEGADVVFDVAGETFPAHKLVLAMRSPVFKAELCGPMRESGTEPISI 238
Query: 341 KDVSHSALRDLLQFMY 388
D+ + LLQF+Y
Sbjct: 239 VDMQPVVFKALLQFIY 254
>04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072
Length = 414
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 278 CSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVN 403
C P + F T++P+VFL+ + + DLLQ + V+
Sbjct: 253 CEPRKEIFFTERNTENPLVFLRFLVSTPWGDLLQIKFSRRVH 294
>08_01_0834 + 8118681-8118847,8119133-8119250,8119387-8119623
Length = 173
Score = 27.5 bits (58), Expect = 4.3
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 34 NIELYFFQMFLLPEL*VQSLG*VPRRVVAINGVGRTIFTMLEQFPRKYVSGLSWPAVA 207
N ELY + F E VQ+ R V ++ + + ++Q P +YV G W VA
Sbjct: 27 NSELYIIRFFGHFERVVQAKRERERNTVKVHALKALVLMNIKQLPEQYVLG-RWTQVA 83
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,069,712
Number of Sequences: 37544
Number of extensions: 187982
Number of successful extensions: 432
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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