Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0888
(409 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2676| Best HMM Match : Kelch_1 (HMM E-Value=0) 50 6e-07
SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 9e-06
SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0) 46 2e-05
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) 46 2e-05
SB_56342| Best HMM Match : Kelch_1 (HMM E-Value=0) 45 3e-05
SB_33725| Best HMM Match : Kelch_1 (HMM E-Value=3.59994e-42) 44 5e-05
SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0) 43 8e-05
SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0) 43 8e-05
SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) 42 1e-04
SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38) 40 6e-04
SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45) 40 0.001
SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0) 40 0.001
SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0) 39 0.002
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 39 0.002
SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36) 38 0.002
SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42) 38 0.004
SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24) 37 0.006
SB_38405| Best HMM Match : BACK (HMM E-Value=0) 37 0.006
SB_18403| Best HMM Match : BACK (HMM E-Value=0) 37 0.006
SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36) 36 0.010
SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37) 36 0.013
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.022
SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0) 34 0.039
SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23) 34 0.039
SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13) 34 0.039
SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.052
SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18) 33 0.068
SB_54052| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.16
SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.27
SB_45209| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.36
SB_25029| Best HMM Match : Collagen (HMM E-Value=0.38) 30 0.63
SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30) 30 0.63
SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30) 30 0.84
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.85
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 1.1
SB_3363| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_42848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_48929| Best HMM Match : BTB (HMM E-Value=1.4e-15) 28 3.4
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 28 3.4
SB_56853| Best HMM Match : BTB (HMM E-Value=1.1e-16) 27 5.9
SB_40853| Best HMM Match : BTB (HMM E-Value=1.4e-17) 27 7.8
SB_6697| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_13923| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
>SB_2676| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 645
Score = 50.4 bits (115), Expect = 6e-07
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +2
Query: 185 GFHGLLSRGDLVDVTLAAEGX-IATHKLVLSVCSPYFQEMFKMN--PTQHPIVFLKDVSH 355
G + L R +L DV L I+ H++VLS CS YF MF N ++ ++++K +
Sbjct: 21 GLNQLRQRKELCDVELCVGNVQISAHRVVLSACSAYFDAMFTGNLLESKKQVIYIKGIDE 80
Query: 356 SALRDLLQFMYQGEVNV 406
+AL+ L+ F Y G+ +
Sbjct: 81 TALQLLVDFAYTGKAEI 97
>SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 46.4 bits (105), Expect = 9e-06
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +2
Query: 188 FHGLLSRGDLVDVTLAAEGX-IATHKLVLSVCSPYFQEMFKMN---PTQHPIVFLKDVSH 355
F+ + +L DV L + I +HKLVL+ SPYF+ MF N TQ I L D+
Sbjct: 23 FNDFRNSKELCDVLLCVDDEEIPSHKLVLAASSPYFRAMFTSNLLECTQRTIT-LYDIDV 81
Query: 356 SALRDLLQFMYQGEVNV 406
AL+ ++++ Y G++ +
Sbjct: 82 GALQQIVEYFYTGKITI 98
>SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 625
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +2
Query: 197 LLSRGDLVDVTL-AAEGXIATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALR 367
LL + L DVT+ A E I H++VL+ CS YF MF M + ++ ++ +S ++
Sbjct: 27 LLEQEKLCDVTIKAGERKIRCHRVVLASCSAYFHSMFTNSMLESSQEVITIQGLSEKSVI 86
Query: 368 DLLQFMYQGEVNV 406
L+ FMY ++ +
Sbjct: 87 QLINFMYTRKITI 99
>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 823
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = +2
Query: 212 DLVDVTL-AAEGXIATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQF 382
+L DV + I H++VL+ CSPYF+ MF +M ++ + ++DV SA+ L+ F
Sbjct: 57 ELCDVVIKVGSSTIHAHRVVLAACSPYFRAMFTREMAESRQAEITIRDVDESAMNLLITF 116
Query: 383 MYQGEVNVK 409
Y + ++
Sbjct: 117 AYTASITIE 125
>SB_56342| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 651
Score = 44.8 bits (101), Expect = 3e-05
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = +2
Query: 125 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAA-EGXIATHKLVLSVCSPYFQEM 301
MAS++ C +F + + + L S L DVTL + + +H++VL+ SPYF M
Sbjct: 1 MASEDGLLFCVPDFPTKVFSSLNELRSEEKLCDVTLVVKDRSLVSHRVVLAGWSPYFHAM 60
Query: 302 F--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 406
M ++ V + + +AL +L+ F Y G +
Sbjct: 61 LTGDMLESRLEKVTIHGIECAALEELINFCYTGRTEI 97
>SB_33725| Best HMM Match : Kelch_1 (HMM E-Value=3.59994e-42)
Length = 635
Score = 44.0 bits (99), Expect = 5e-05
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +2
Query: 215 LVDVTLAAEGX-IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFM 385
L DV L EG + H+LVL+ SP+F +F +M Q + LK V S + ++L+++
Sbjct: 33 LCDVDLMVEGLTFSAHRLVLAAGSPFFHGLFTTEMKEKQENKIVLKQVKASVMENVLEYL 92
Query: 386 YQGEVNV 406
Y G+ ++
Sbjct: 93 YTGKTSL 99
>SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 481
Score = 43.2 bits (97), Expect = 8e-05
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +2
Query: 197 LLSRGDLVDVTLAA-EGXIATHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALR 367
L R L DVTL E I H+LVL+ S YFQ MF + + V L+DV A+
Sbjct: 40 LRGRKQLCDVTLCVGERQIVAHRLVLASFSSYFQAMFTGGLVESFEDSVTLRDVDSGAVE 99
Query: 368 DLLQFMYQGEVNV 406
L+ F Y G++++
Sbjct: 100 LLVDFAYTGKLDI 112
>SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 587
Score = 43.2 bits (97), Expect = 8e-05
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +2
Query: 215 LVDVTLAAEGX-IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFM 385
L DVTL EG H++VL+ S YF +F +M P V L+++ S + +L ++
Sbjct: 29 LCDVTLVVEGKEFPAHRIVLAASSKYFYGLFTSEMIEKNAPSVKLQELRASVMNHILTYL 88
Query: 386 YQGEVNV 406
Y GE+ V
Sbjct: 89 YTGEITV 95
>SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 42.7 bits (96), Expect = 1e-04
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Frame = +2
Query: 170 ANMSAGFHGLLSR---GDLVDVTLAAEGX--IATHKLVLSVCSPYFQEMFKMN--PTQHP 328
AN GL S+ +L DVTL E IA H+ VL+ SPYF+ MF N +
Sbjct: 63 ANSHRVLQGLFSQIGLKELCDVTLETEDGLSIAVHRNVLAAVSPYFRAMFTGNLLESGKN 122
Query: 329 IVFLKDVSHSALRDLLQFMYQGEVNV 406
+ LK ++ AL+ LL ++Y + +
Sbjct: 123 RILLKGIAGVALQALLDYVYTSSIEI 148
>SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 590
Score = 42.3 bits (95), Expect = 1e-04
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +2
Query: 134 DEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGX-IATHKLVLSVCSPYFQEMFK- 307
D+ F+ + + + + L G + DV + AE H+ +LS S YF MF
Sbjct: 6 DDSFTFYDDKYSKAILHRINQLRHHGAMCDVVIKAEDTEFLAHRNILSASSDYFFAMFNG 65
Query: 308 -MNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
M + +V + V+ ++R +L F+Y GE+
Sbjct: 66 NMKESSQDVVTITGVTPDSMRSILNFIYTGEI 97
>SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 40.7 bits (91), Expect = 4e-04
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +2
Query: 215 LVDVTLAA-EGXIATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFM 385
L DV L E A H+ VL+ CS YF MF ++ ++ I+ +KD+ ++ L++F
Sbjct: 11 LCDVVLRIDEQSYAGHRAVLASCSAYFYAMFNGELAESKQKIITMKDILPDYMQVLVEFA 70
Query: 386 YQGEVNV 406
Y G V +
Sbjct: 71 YTGRVEI 77
>SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 40.7 bits (91), Expect = 4e-04
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +2
Query: 158 NNFHA-NMSAGFHGLLSRGDLVDVTLAA-EGXIATHKLVLSVCSPYFQEMFK--MNPTQH 325
++FHA N+ L + DVT+ + I +H+L+L+ S YF MF M+ T
Sbjct: 15 DSFHACNVLETLRTLFQGRKMCDVTVVVGKMEIPSHRLILAANSSYFYSMFTSGMSETAQ 74
Query: 326 PIVFLKDVSHSALRDLLQFMYQGEVNV 406
+ LK+V + +R L+++ Y + +
Sbjct: 75 NRINLKEVDATVVRQLIEYCYTSTIEI 101
>SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38)
Length = 518
Score = 40.3 bits (90), Expect = 6e-04
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 188 FHGLLSRGDLVDVTLAAEGX-IATHKLVLSVCSPYFQEM 301
F L G+L+DVTL +G I H++VL+ CSPYF+ M
Sbjct: 29 FKELRDDGELLDVTLHVQGEEIKAHRVVLAACSPYFRAM 67
>SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45)
Length = 554
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +2
Query: 209 GDLVDVTLAAEGX--IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLL 376
G DV L E I HKLVLS S YF+ MF M +Q + ++ + ++ L+
Sbjct: 23 GIFCDVVLMTEDGQEIDAHKLVLSASSEYFRAMFLTDMKESQQKFITIRAIDSQSMTTLV 82
Query: 377 QFMYQGEVNV 406
+F Y V +
Sbjct: 83 EFAYTSNVRI 92
>SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 595
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +2
Query: 215 LVDVTLAAEGX-IATHKLVLSVCSPYFQEMFKMN-PTQHPIVFLKDVSHSALRDLLQFMY 388
L DV L +G HK +L+ S YF MF + T V +++++ +A+ LL F+Y
Sbjct: 33 LTDVVLIVDGHEFPAHKNILAASSDYFMAMFSGHMATVDRTVVVQEITSTAMEVLLAFIY 92
Query: 389 QGEV 400
QG++
Sbjct: 93 QGKL 96
>SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +2
Query: 188 FHGLLSRGDLVDVTLA-AEGXIATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHS 358
F L D+ + + I HKLVL+ S YF MF M T V L D+ +
Sbjct: 24 FEDFRKNSQLCDIKIVIGDKRIRAHKLVLASFSDYFSAMFTGDMAETSQNTVHLTDMDPA 83
Query: 359 ALRDLLQFMYQGEVNVK 409
A++ L+ + Y E+ ++
Sbjct: 84 AVQALISYSYTSEIEIR 100
>SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 39.1 bits (87), Expect = 0.001
Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFKMN-PTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 406
I HK VLS+ S F MF TQ V L DV SA LL+F+Y EV +
Sbjct: 1624 IPAHKFVLSIGSAVFDAMFNGGIATQSDEVELPDVEPSAFMALLRFLYTDEVQI 1677
>SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 215 LVDVTLAA-EGXIATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFM 385
L DVTL E H+ +L+ SPYF+ +F +M Q + L +V + D+L ++
Sbjct: 25 LCDVTLNVNEVLFHAHRNILAASSPYFRALFTSEMRENQGNEIKLNNVDVEIMEDILAYL 84
Query: 386 YQGEVNVK 409
Y G V V+
Sbjct: 85 YSGSVVVE 92
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 215 LVDVTLAA-EGXIATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFM 385
L DVTL E H+ +L+ SPYF+ +F +M Q + L +V + D+L ++
Sbjct: 1394 LCDVTLNVNEVLFHAHRNILAASSPYFRALFTSEMRENQGNEIKLNNVDVEIMEDILAYL 1453
Query: 386 YQGEVNVK 409
Y G V V+
Sbjct: 1454 YSGSVVVE 1461
>SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36)
Length = 574
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 215 LVDVTLAAEGX-IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFM 385
L DV L E + HK +L+ S YF MF M + V LK + S ++++L F+
Sbjct: 40 LCDVVLLVENEEFSAHKGILAANSHYFMAMFTTDMIEKEQERVILKKLKPSVVKEILDFL 99
Query: 386 YQGEVNV 406
Y G + +
Sbjct: 100 YTGRIEI 106
>SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 37.9 bits (84), Expect = 0.003
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +2
Query: 209 GDLVDVTLAAEGX-IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQ 379
G L DV L E H++VL+ CS YF MF M +Q ++ L+ ++ + LL
Sbjct: 35 GKLCDVVLQVEKKEFPAHRIVLASCSDYFYAMFTNDMLESQKGVIELQGLASDTMEVLLD 94
Query: 380 FMYQGEVNV 406
F+Y V +
Sbjct: 95 FVYTETVKL 103
>SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42)
Length = 603
Score = 37.5 bits (83), Expect = 0.004
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +2
Query: 221 DVTLAAEGXI-ATHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQ 391
DV L EG + A H+ VL+ S +F MF M + + L ++ AL +L F Y
Sbjct: 53 DVNLEVEGQVFAAHRCVLAANSQFFYTMFTSGMRDSNDSRIKLCSLTSGALSSILDFFYT 112
Query: 392 GEVNV 406
E+N+
Sbjct: 113 REINI 117
>SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24)
Length = 467
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFKMNPTQH-PIVFLKDVSHSALRDLLQFMYQGEV 400
HK VLSV SP F+ MF N + P V L D + ++LL+++Y +V
Sbjct: 46 HKFVLSVSSPVFEAMFFGNLAESGPTVRLPDCTVDGFQELLRYLYCDQV 94
>SB_38405| Best HMM Match : BACK (HMM E-Value=0)
Length = 423
Score = 37.1 bits (82), Expect = 0.006
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 212 DLVDVTL-AAEGXIATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQF 382
+L DV L + I H+LVL+ CS YF MF ++ ++ + L+ + A+ L++F
Sbjct: 40 ELCDVVLLVGDRRIYAHRLVLAACSQYFHAMFTSELLESRQKEISLQGLQPDAMELLVEF 99
Query: 383 MYQGEVNV 406
Y + V
Sbjct: 100 AYTARIQV 107
>SB_18403| Best HMM Match : BACK (HMM E-Value=0)
Length = 423
Score = 37.1 bits (82), Expect = 0.006
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 212 DLVDVTL-AAEGXIATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQF 382
+L DV L + I H+LVL+ CS YF MF ++ ++ + L+ + A+ L++F
Sbjct: 40 ELCDVVLLVGDRRIYAHRLVLAACSQYFHAMFTSELLESRQKEISLQGLQPDAMELLVEF 99
Query: 383 MYQGEVNV 406
Y + V
Sbjct: 100 AYTARIQV 107
>SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36)
Length = 398
Score = 36.3 bits (80), Expect = 0.010
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 176 MSAGFHGLLSRGDLVDVTLAAEGX-IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKD 346
+S+ LL D L A G HK +L+ SP F MF +M ++ V + D
Sbjct: 209 LSSHMGNLLDNATFSDTVLIAGGREFKAHKAILAARSPVFSAMFEHEMEESRKGRVEILD 268
Query: 347 VSHSALRDLLQFMYQG 394
+ +++L+F+Y G
Sbjct: 269 IDPDVFQEMLKFVYTG 284
>SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37)
Length = 521
Score = 35.9 bits (79), Expect = 0.013
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 406
HK+V+S SPYF+ +F + + V ++ + LL F+Y G +NV
Sbjct: 48 HKIVVSASSPYFEVLFSGGLRESYLDTVTIQGIDSETFSALLDFIYTGVINV 99
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 35.1 bits (77), Expect = 0.022
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +2
Query: 215 LVDVTL--AAEGXIATHKLVLSVCSPYFQEMFKMNPTQHPIVFLK-DVSHSALRDLLQFM 385
+ D+TL +E HK+VL+ S YF+ +F + + D+S L+ +L+++
Sbjct: 28 MCDITLKTTSEDIFPAHKIVLAAKSDYFKALFTTEMAEKNCQEISLDISTRTLKAILKYV 87
Query: 386 YQGEVNV 406
Y G+V++
Sbjct: 88 YCGDVSL 94
>SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 34.3 bits (75), Expect = 0.039
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +2
Query: 215 LVDVTL-AAEGXIATHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFM 385
L DV L A HK VL S +F +F M Q V LK + + DLL ++
Sbjct: 20 LCDVELIVGNNRFAAHKNVLCASSIFFNGLFSSSMRERQENTVNLKQFPVNIMEDLLTYL 79
Query: 386 YQGEVNV 406
Y G++ V
Sbjct: 80 YTGKLEV 86
>SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23)
Length = 417
Score = 34.3 bits (75), Expect = 0.039
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 197 LLSRGDLVDVTLAAEGX-IATHKLVLSVCSPYFQEMFKMNPTQHP-IVFLKDVSHSALRD 370
+LS + V T A E I H+ VLSV SP F+ MF + + L D AL +
Sbjct: 25 VLSDVEFVVCTSAGEKISIPAHRYVLSVSSPVFEAMFHGAMAESSREISLPDCYAEALSE 84
Query: 371 LLQFMYQGEVNV 406
+L++ Y EV +
Sbjct: 85 MLRYAYYDEVKL 96
>SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13)
Length = 133
Score = 34.3 bits (75), Expect = 0.039
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
I HK VL+ SP F+ MF K+ T I L D + + ++L+++Y+ EV
Sbjct: 10 IPAHKYVLATSSPVFEAMFFGKLAETSRNIT-LPDCFYEGVLEMLRYLYRDEV 61
>SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 33.9 bits (74), Expect = 0.052
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
I HK VL+ SP F+ MF K+ T I L D S + ++L+F+Y E+
Sbjct: 41 IPAHKYVLATSSPVFEAMFFGKLAETGFTIA-LPDCSAEGMLEMLRFIYTEEI 92
>SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18)
Length = 123
Score = 33.5 bits (73), Expect = 0.068
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = +2
Query: 221 DVTLAAEGXI-ATHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMY 388
D+TL A + + H++VL+ SPYF+E+ + V + A+ +L+F Y
Sbjct: 42 DITLKAGNLVLSAHRVVLAALSPYFRELLLPTNNEKAEKEYVMPDSLKPGAVVAMLEFFY 101
Query: 389 QG--EVNVK 409
G ++N+K
Sbjct: 102 SGTLQINLK 110
>SB_54052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 32.3 bits (70), Expect = 0.16
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Frame = +2
Query: 125 MASDEQF---SLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGXI-ATHKLVLSVCSPYF 292
M+ DE+ S+ +F ++ + L L D + G HK VL SP+F
Sbjct: 1 MSMDEEIHFKSVIDTDFKLSILDRLNSLRKENVLCDAVIQIGGKTHPVHKNVLCAASPFF 60
Query: 293 QEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVK 409
+ +F M + L+ +S +++ FMY G + V+
Sbjct: 61 RGLFTNDMQEKNQEHIELQVISGDVGEEVISFMYTGAIKVE 101
>SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 31.5 bits (68), Expect = 0.27
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +2
Query: 215 LVDVTLAA-EGXIATHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSH---SALRDLLQF 382
L DVTL E I HK+VL+ SPYF+ +F + + + ++ S+ A+ +++ +
Sbjct: 47 LCDVTLRHNERRIPCHKVVLAARSPYFRHLFINSESGQYVKNVELPSYFSILAVDEVINY 106
Query: 383 MYQGEVN 403
+Y G+++
Sbjct: 107 LYSGKLH 113
>SB_45209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 31.1 bits (67), Expect = 0.36
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +2
Query: 56 KCFSYRNYKYKA*DRFHVESSLSMASDEQFSLCWNNFHANMSAGFHGL 199
KC YRNY F V++ M S E WN F N++AG+H L
Sbjct: 183 KC--YRNYLGCDGLAFFVDNK-EMMSYEGMQFDWNTFSVNLTAGYHQL 227
>SB_25029| Best HMM Match : Collagen (HMM E-Value=0.38)
Length = 388
Score = 30.3 bits (65), Expect = 0.63
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 236 AEGXIATHKLVLSVCSPYFQEMFKMNPTQHPIVFLKD 346
A+ I+T ++ +CSP + +M +M P + P FL +
Sbjct: 288 AQQQISTSSKIIVLCSPKYLKMCQMRPKEDPKAFLTE 324
>SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30)
Length = 176
Score = 30.3 bits (65), Expect = 0.63
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 209 GDLVDVTL-AAEGXIATHKLVLSVCSPYFQEMFK---MNPTQHPIVFLKDVSHSALRDLL 376
G+ DVTL + HKLVL+ S YF+ MF + +++ +V L D+ + ++
Sbjct: 30 GEGCDVTLKVTDQSFPGHKLVLAANSTYFRAMFGEGFVESSKNDVV-LHDLDPKGVNAVI 88
Query: 377 QFMYQGEVNV 406
+ Y ++ +
Sbjct: 89 SYFYNSKIEI 98
>SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30)
Length = 619
Score = 29.9 bits (64), Expect = 0.84
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +2
Query: 209 GDLVDVTL-AAEGXIATHKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRDL 373
G+ DVTL + HKLVL+ S YF+ MF + + V L D+ + +
Sbjct: 72 GEGCDVTLKVTDQSFPGHKLVLAANSTYFRAMFGLREGFVESSKNDVVLHDLDPKGVNAV 131
Query: 374 LQFMYQGEVNV 406
+ + Y ++ +
Sbjct: 132 ISYFYNSKIEI 142
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 27.9 bits (59), Expect(2) = 0.85
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Frame = +2
Query: 197 LLSRGDLVDVTLAAEGXIAT---HKLVLSVCSPYFQEMF----KMN--PTQHPIVFLKDV 349
+L D DV G T H+ +LS SP F+E+F K+N P ++ +F D+
Sbjct: 243 VLGNDDSADVKFTFSGNAPTLHAHQTILSAASPIFRELFLGSKKVNAVPRKYQAIF-SDI 301
Query: 350 SHS 358
S S
Sbjct: 302 SWS 304
Score = 20.6 bits (41), Expect(2) = 0.85
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 344 DVSHSALRDLLQFMYQG 394
D+S + +LQF+Y G
Sbjct: 329 DISCESFEKILQFLYTG 345
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFKMN-PTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 406
I HKL+L++ SP F MF + Q + + D + +LL++ Y E +
Sbjct: 2776 IPGHKLILAISSPVFYAMFYGSMAEQKAEITVADSDADSFMELLRYAYFDEATI 2829
>SB_3363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 200 LSRGDLVDVTLAAEGX-IATHKLVLSVCSPYFQEMFKMNPTQHPIVFLKD 346
L GD DV G H+ +L+ S YF MF+ ++ LK+
Sbjct: 84 LESGDFADVCFVIHGQRFCAHRAILTTRSSYFASMFETKWKDKHVITLKN 133
>SB_42848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 29.1 bits (62), Expect = 1.5
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 84 TKLRIGSTSSRRYQWRRTNNFHYA 155
TK+ + +++RY WR+TN H++
Sbjct: 154 TKMELFGQNAKRYVWRKTNTAHHS 177
>SB_48929| Best HMM Match : BTB (HMM E-Value=1.4e-15)
Length = 239
Score = 27.9 bits (59), Expect = 3.4
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 212 DLVDVTLAAEGX-IATHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMY 388
D DV L E HK +L + SP F+ MF+ PI L + + DL+ +Y
Sbjct: 16 DESDVILVVEEQEFHVHKFILKMASPVFKAMFEHVKDSKPIQ-LPGKKFNQVLDLMNHIY 74
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 273 DRTNLCVAIXPSAANVTSTRSPRDS 199
+ T L + + P A +VTS R+PR+S
Sbjct: 3997 ESTTLAIDVSPRAPSVTSPRTPRES 4021
>SB_56853| Best HMM Match : BTB (HMM E-Value=1.1e-16)
Length = 605
Score = 27.1 bits (57), Expect = 5.9
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF-KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
I HK +L V SP F MF T V L D L + L+++Y V
Sbjct: 47 IPAHKYILGVSSPVFFAMFYGQMSTSISKVELPDCDSVGLIEFLRYLYCNRV 98
>SB_40853| Best HMM Match : BTB (HMM E-Value=1.4e-17)
Length = 259
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 224 VTLAAEGXIATHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMY 388
V + E HK LS+ SP F++MF+ Q + L ++++L +Y
Sbjct: 20 VLVVEEKHFNVHKSTLSMWSPVFEKMFRERNDQE--ICLPGKKSKEIKEMLLVIY 72
>SB_6697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 595
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 90 LRIGSTSSRRYQWRRTNNFHYAGTISTQI 176
L + YQW +F++AGT+ T +
Sbjct: 133 LALNPGGEHHYQWDLAGSFYFAGTVITTV 161
>SB_13923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 233 AAEGXIATHKLVLSVCSPYFQEMF 304
+A+ I HK ++S+ SP F MF
Sbjct: 64 SAKQSIPAHKYIMSISSPVFSSMF 87
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,127,420
Number of Sequences: 59808
Number of extensions: 228772
Number of successful extensions: 493
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 740151420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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