Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0888
         (409 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical p...    44   4e-05
AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    44   6e-05
Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical p...    40   7e-04
AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical ...    37   0.005
Z77660-9|CAB01179.1|  602|Caenorhabditis elegans Hypothetical pr...    35   0.026
AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.      35   0.026
AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.      35   0.026
AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1 suppres...    35   0.026
L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical pr...    33   0.060
Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical pr...    33   0.079
U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.       33   0.079
Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical pr...    28   3.0  
U41034-2|AAA82379.1|  915|Caenorhabditis elegans Hypothetical pr...    28   3.0  
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ...    27   5.2  
U23454-6|AAC46521.1|  192|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr...    26   9.1  
AC025716-11|AAK39605.1|  823|Caenorhabditis elegans Yeast mcm (l...    26   9.1  

>Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical
           protein T27E9.4a protein.
          Length = 589

 Score = 44.0 bits (99), Expect = 4e-05
 Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
 Frame = +2

Query: 188 FHGLLSRGDLVDVTLAAEGX-IATHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHS 358
           F+ L S+  L DV L  E   ++ HK++L+   PYF+ MF ++  +  +  + ++D+++ 
Sbjct: 41  FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYE 100

Query: 359 ALRDLLQFMYQGEVNV 406
            +  LL F Y GE+ +
Sbjct: 101 TVDALLSFAYTGELRI 116


>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 43.6 bits (98), Expect = 6e-05
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
 Frame = +2

Query: 194 GLLSRGDLVDVTLAAEGX-IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSAL 364
           GL +R  L DVTL      I  H++VLS CSPYF  MF  +M       + ++++    L
Sbjct: 48  GLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTL 107

Query: 365 RDLLQFMYQGEVNV 406
             L++F Y G + +
Sbjct: 108 EALIEFCYTGAIAI 121


>Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical
           protein T27E9.4b protein.
          Length = 591

 Score = 39.9 bits (89), Expect = 7e-04
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
 Frame = +2

Query: 188 FHGLLSRGDLVDVTLAAEGX-IATHKLVLSVCSPYFQEMFKMNPTQHPIVFL----KDVS 352
           F+ L S+  L DV L  E   ++ HK++L+   PYF+ MF ++  +  +  +     D++
Sbjct: 41  FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMN 100

Query: 353 HSALRDLLQFMYQGEVNV 406
           +  +  LL F Y GE+ +
Sbjct: 101 YETVDALLSFAYTGELRI 118


>AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical
           protein Y75B12B.4 protein.
          Length = 320

 Score = 37.1 bits (82), Expect = 0.005
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 215 LVDVTLAAEGX-IATHKLVLSVCSPYFQEMFKMNPTQHPIVFLK--DVSHSALRDLLQFM 385
           L DV L  EG  +   K VL+  S +FQ+MF  N  +     +K  DV+HS   DLL  +
Sbjct: 159 LTDVVLVLEGKHVHVGKQVLATSSQFFQKMFYSNFAEKTQAEIKIDDVTHSEFIDLLNVI 218

Query: 386 Y 388
           Y
Sbjct: 219 Y 219


>Z77660-9|CAB01179.1|  602|Caenorhabditis elegans Hypothetical
           protein F38H4.7 protein.
          Length = 602

 Score = 34.7 bits (76), Expect = 0.026
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFK--MNP--TQHPI-VFLKDVSHSALRDLLQFMYQGEVNVK 409
           I  HK VLS+ S  F  MF   + P  T+  + + L DV  SA   LL+F+Y  EV ++
Sbjct: 204 IPAHKFVLSIGSVVFDAMFNGGLTPKNTEEALEIELPDVEPSAFLALLKFLYSDEVKIE 262


>AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 34.7 bits (76), Expect = 0.026
 Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 8/100 (8%)
 Frame = +2

Query: 125 MASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGX-IATHKLVLSVC 280
           +AS E   LC   F  +     H L  R       G   DV +  +    A H+ +L+  
Sbjct: 4   VASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNILAAH 63

Query: 281 SPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
           SPYF  +FK        + +   S       L +MY G V
Sbjct: 64  SPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTV 103


>AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 34.7 bits (76), Expect = 0.026
 Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 8/100 (8%)
 Frame = +2

Query: 125 MASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGX-IATHKLVLSVC 280
           +AS E   LC   F  +     H L  R       G   DV +  +    A H+ +L+  
Sbjct: 4   VASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNILAAH 63

Query: 281 SPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
           SPYF  +FK        + +   S       L +MY G V
Sbjct: 64  SPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTV 103


>AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1
           suppressor/dio uptake defective/raf enhancer protein 1
           protein.
          Length = 909

 Score = 34.7 bits (76), Expect = 0.026
 Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 8/100 (8%)
 Frame = +2

Query: 125 MASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGX-IATHKLVLSVC 280
           +AS E   LC   F  +     H L  R       G   DV +  +    A H+ +L+  
Sbjct: 4   VASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNILAAH 63

Query: 281 SPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
           SPYF  +FK        + +   S       L +MY G V
Sbjct: 64  SPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTV 103


>L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical
           protein C50C3.8 protein.
          Length = 410

 Score = 33.5 bits (73), Expect = 0.060
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFK---MNPTQHPIVFLKDVSHSALRDLLQFMYQG 394
           I  H+ +L   SP F+ MF    M   Q   + ++D  + ++R +++FMY G
Sbjct: 230 IKAHRCILGQNSPVFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMYTG 281


>Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical
           protein ZK858.4 protein.
          Length = 395

 Score = 33.1 bits (72), Expect = 0.079
 Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
 Frame = +2

Query: 161 NFHANMSAGFHGLLSRGDLVDVTLAAEGXIA-THKLVLSVCSPYFQEMFKMNPT---QHP 328
           N    +   +  L S+  L D  +   G I   HK VL+  SP F  M     T   +  
Sbjct: 182 NSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPVFNAMLTHQDTDEAKSS 241

Query: 329 IVFLKDVSHSALRDLLQFMYQGEVN 403
           ++++ D+ +  + +++ ++Y G  N
Sbjct: 242 MMYINDMDYDVIYEMVYYIYCGRCN 266


>U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.
          Length = 395

 Score = 33.1 bits (72), Expect = 0.079
 Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
 Frame = +2

Query: 161 NFHANMSAGFHGLLSRGDLVDVTLAAEGXIA-THKLVLSVCSPYFQEMFKMNPT---QHP 328
           N    +   +  L S+  L D  +   G I   HK VL+  SP F  M     T   +  
Sbjct: 182 NSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPVFNAMLTHQDTDEAKSS 241

Query: 329 IVFLKDVSHSALRDLLQFMYQGEVN 403
           ++++ D+ +  + +++ ++Y G  N
Sbjct: 242 MMYINDMDYDVIYEMVYYIYCGRCN 266


>Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical
           protein F27C8.5 protein.
          Length = 565

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 13/55 (23%), Positives = 24/55 (43%)
 Frame = +2

Query: 242 GXIATHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 406
           G    H +V+   S  F E F      +    + D    ++R +  +MY GE+++
Sbjct: 44  GFDMVHSVVICAHSDVFSETFDNQRAPYQPFNMTDFDPDSVRRVFDWMYSGEIDI 98


>U41034-2|AAA82379.1|  915|Caenorhabditis elegans Hypothetical
           protein M02D8.3 protein.
          Length = 915

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 48  FFSNVSPTGIISTKLRIGSTSSRRYQWRRTNNFHYAGTISTQICQ 182
           F+   +P G+I    +   T+ RR   R+T N +    + T ICQ
Sbjct: 825 FWKQANPVGLIEQTNQSEKTAERRRSRRKTRNAN-RSLLDTSICQ 868


>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
            protein Y38C9A.1 protein.
          Length = 1484

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 219  TRSPRDSRP*KPADIFAWKLFQHSENCSSDAI 124
            TRSP+  +P KP    ++  FQ+S + SS A+
Sbjct: 1362 TRSPQVQKPIKPTASRSFTSFQNSPSTSSSAL 1393


>U23454-6|AAC46521.1|  192|Caenorhabditis elegans Hypothetical
           protein C10A4.7 protein.
          Length = 192

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 149 LCWNNFHANMSAGFHGLLSRGDLVDVTL 232
           LCW + +AN++A F  LL+ G +   T+
Sbjct: 129 LCWEDENANVAAAFILLLASGTITFFTM 156


>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
           protein H02I12.1 protein.
          Length = 1319

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 73  PVGETFEKNITQCSQ 29
           P+GETF+K +  CS+
Sbjct: 602 PIGETFDKTLRSCSE 616


>AC025716-11|AAK39605.1|  823|Caenorhabditis elegans Yeast mcm
           (licensing factor) relatedprotein 4 protein.
          Length = 823

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 191 HGLLSRGDLVDVTLAAEGXIATHKLVLSVCSPYFQEMFKMNPTQH 325
           H LLSR DL+ + + A+  +   +L   + S YF+       T+H
Sbjct: 597 HTLLSRFDLIFLIVDAQDEMQDRRLGNHLVSLYFENDGNQEKTEH 641


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,221,443
Number of Sequences: 27780
Number of extensions: 178412
Number of successful extensions: 378
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)