Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0888
         (409 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.     100   1e-23
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          87   7e-20
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      38   3e-05
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   5.4  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   7.1  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   7.1  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   7.1  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 99.5 bits (237), Expect = 1e-23
 Identities = 43/95 (45%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
 Frame = +2

Query: 125 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGX-IATHKLVLSVCSPYFQEM 301
           M   + F L WNN+ +++++ F  L    D VDVTLA +G  +  H++VLS CSPYF+E+
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFREL 60

Query: 302 FKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 406
            K  P +HP++ L+DV+ S L  L++F+Y GEVNV
Sbjct: 61  LKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNV 95


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 87.0 bits (206), Expect = 7e-20
 Identities = 40/92 (43%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
 Frame = +2

Query: 137 EQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAA-EGXIATHKLVLSVCSPYFQEMFKMN 313
           + + L WNN+ +NM++ FH LL     VDVTLA  E  +  HK+VLS CS YFQ++   N
Sbjct: 9   QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSN 68

Query: 314 PTQHP-IVFLKDVSHSALRDLLQFMYQGEVNV 406
           P +HP I+  +DV  + L+ +++F+Y+GE++V
Sbjct: 69  PCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDV 100


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 38.3 bits (85), Expect = 3e-05
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 125 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 241
           M   + F L WNN+ +++++ F  L    D VDVTLA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +2

Query: 143 FSLCWNNFHANMSAGFHGLLSRGDLVDVTL 232
           F +CW  FHA      +   S+    DV +
Sbjct: 294 FFICWAPFHAQRLLAVYAQNSKDKPEDVLI 323


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 375 NKSLSAE*LTSFKNTIGCC 319
           NKS     L  FK+T  CC
Sbjct: 41  NKSSGPNELGRFKHTDACC 59


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 375 NKSLSAE*LTSFKNTIGCC 319
           NKS     L  FK+T  CC
Sbjct: 46  NKSSGPNELGRFKHTDACC 64


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 375 NKSLSAE*LTSFKNTIGCC 319
           NKS     L  FK+T  CC
Sbjct: 46  NKSSGPNELGRFKHTDACC 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,595
Number of Sequences: 438
Number of extensions: 2132
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)