Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0886
         (598 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6DEI1 Cluster: TATA element modulatory factor 1; n=4; ...    37   0.31 
UniRef50_UPI0000D559F3 Cluster: PREDICTED: similar to outer dens...    34   2.2  
UniRef50_A0DYZ1 Cluster: Chromosome undetermined scaffold_7, who...    34   2.2  
UniRef50_UPI0000DB6B09 Cluster: PREDICTED: similar to outer dens...    34   2.9  

>UniRef50_Q6DEI1 Cluster: TATA element modulatory factor 1; n=4;
            Clupeocephala|Rep: TATA element modulatory factor 1 -
            Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 1136

 Score = 37.1 bits (82), Expect = 0.31
 Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
 Frame = +1

Query: 46   EDVEITGGSIL---LQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLE 216
            E   + GGS +   LQ QL   EGE+ ++QMEIA+++R R  VM+++ + + T E++ +E
Sbjct: 1018 EAARLGGGSSVIESLQSQLKLREGEITQLQMEIASLERSR-TVMSEELVRL-TNENDEME 1075

Query: 217  S 219
            S
Sbjct: 1076 S 1076


>UniRef50_UPI0000D559F3 Cluster: PREDICTED: similar to outer dense
           fiber of sperm tails 2 isoform 1; n=1; Tribolium
           castaneum|Rep: PREDICTED: similar to outer dense fiber
           of sperm tails 2 isoform 1 - Tribolium castaneum
          Length = 811

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 15/41 (36%), Positives = 27/41 (65%)
 Frame = +1

Query: 76  LLQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTP 198
           +L+KQL DME +VK +Q E+ A++ +R  +   K++ +  P
Sbjct: 350 ILEKQLCDMENDVKTMQSELTAVQTEREHLEQHKKIIICPP 390


>UniRef50_A0DYZ1 Cluster: Chromosome undetermined scaffold_7, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_7,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1366

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +1

Query: 79  LQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTK-KQMN 186
           LQK+L D E +VKE++  I  +K+ ++D++ K KQ N
Sbjct: 646 LQKKLDDQESQVKELRTNIEQMKKQKVDLIKKMKQEN 682


>UniRef50_UPI0000DB6B09 Cluster: PREDICTED: similar to outer dense
           fiber of sperm tails 2 isoform 1; n=1; Apis
           mellifera|Rep: PREDICTED: similar to outer dense fiber
           of sperm tails 2 isoform 1 - Apis mellifera
          Length = 933

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 13/35 (37%), Positives = 27/35 (77%)
 Frame = +1

Query: 79  LQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQM 183
           L++QLG ME EV+ +Q+E+A ++R+R  +  ++++
Sbjct: 424 LEQQLGSMECEVRNMQIELANVQRERQQLEQQRKL 458


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,882,713
Number of Sequences: 1657284
Number of extensions: 9656202
Number of successful extensions: 26576
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26565
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)