Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0886
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13176| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_33744| Best HMM Match : SMC_N (HMM E-Value=0) 29 2.9
SB_34022| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_12307| Best HMM Match : Death (HMM E-Value=0.00097) 29 2.9
SB_18929| Best HMM Match : BRCT (HMM E-Value=1.4e-08) 28 5.0
SB_17366| Best HMM Match : Filament (HMM E-Value=0.14) 28 6.6
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 27 8.7
SB_46038| Best HMM Match : TRI5 (HMM E-Value=3.5) 27 8.7
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_1134| Best HMM Match : DMAP_binding (HMM E-Value=6.4) 27 8.7
>SB_13176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 55 EITGGSILLQKQLGDMEGEVKEIQMEIAAIK 147
E + +LQK DM+G VK++QMEIA +K
Sbjct: 296 EYKSKNAVLQKDCEDMKGLVKDLQMEIAYLK 326
>SB_33744| Best HMM Match : SMC_N (HMM E-Value=0)
Length = 1014
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +1
Query: 79 LQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLESTDSGFGES 243
LQKQ D + +VKE++ +IA +++ D K + + E++ S FG++
Sbjct: 698 LQKQSSDAQLQVKEMEHKIAKFQKESKDAANK--VESMLAKYEWISSERQYFGQA 750
>SB_34022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 476 WRFQSRHLFFGIFPIFFMSRNFFM 405
W F +HL++ P+FF SR ++
Sbjct: 65 WDFAGQHLYYATHPVFFSSRAVYV 88
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 476 WRFQSRHLFFGIFPIFFMSRNFFM 405
W F +HL++ P+FF SR ++
Sbjct: 477 WDFAGQHLYYATHPVFFSSRAVYV 500
>SB_12307| Best HMM Match : Death (HMM E-Value=0.00097)
Length = 1366
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 476 WRFQSRHLFFGIFPIFFMSRNFFM 405
W F +HL++ P+FF SR ++
Sbjct: 541 WDFAGQHLYYATHPVFFSSRAVYV 564
>SB_18929| Best HMM Match : BRCT (HMM E-Value=1.4e-08)
Length = 1213
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 81 AKTIGGYGRRSKRNPDGNSRYKT*PIRCDDEETDECFYAG 200
AK + ++KR P + KT P+ C ++ET E Y G
Sbjct: 649 AKILNTRIAKTKREPKQTRKKKT-PVSCTEDETPEIEYGG 687
>SB_17366| Best HMM Match : Filament (HMM E-Value=0.14)
Length = 306
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +1
Query: 37 IQSEDVEITGGSILLQKQLGDMEGEVK-------EIQMEIAAIKRDRLD 162
++ E VE+ G LQ++ ++E E+ E++ EI+AIKRD+ D
Sbjct: 254 VKRERVELEGRLSSLQRKNEELEDELATLRRKKLEVEDEISAIKRDKAD 302
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/59 (25%), Positives = 33/59 (55%)
Frame = +1
Query: 43 SEDVEITGGSILLQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLES 219
S++V+++ +L+ Q+ + E V+ +M++ +RD +++ K T +E LES
Sbjct: 1584 SDEVDVSKEKTILEVQVQEQESMVQNNEMQLLNAERDLQEMLMAKDA---TDSAENLES 1639
>SB_46038| Best HMM Match : TRI5 (HMM E-Value=3.5)
Length = 541
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +1
Query: 76 LLQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLESTDSGFGESVN 249
L K + D+E ++KE ++ ++K + L ++ K +++ + S ES SG G S+N
Sbjct: 183 LSPKDILDLESDIKEKDVDEGSLKENSLSLVDKVLLDLESISSR--ESLTSGLG-SIN 237
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 70 SILLQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTK 174
+I L+ +L D + + +Q E+A +K+D+ M K
Sbjct: 2595 TIHLEVELSDWKDQASSLQSEVAQLKKDKAAAMHK 2629
>SB_1134| Best HMM Match : DMAP_binding (HMM E-Value=6.4)
Length = 422
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +1
Query: 76 LLQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQMNVFTPESEYLESTDSGFGESVN 249
L K + D+E ++KE ++ ++K + L ++ K +++ + S ES SG G S+N
Sbjct: 158 LSPKDILDLESDIKEKDVDEGSLKENSLSLVDKVLLDLESISSR--ESLTSGLG-SIN 212
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,110,126
Number of Sequences: 59808
Number of extensions: 285874
Number of successful extensions: 712
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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