Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0886
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U22897-1|AAA75297.1|  446|Homo sapiens NDP52 protein.                  30   7.2  
CR456763-1|CAG33044.1|  446|Homo sapiens NDP52 protein.                30   7.2  
BC015893-1|AAH15893.1|  446|Homo sapiens calcium binding and coi...    30   7.2  
BC004130-1|AAH04130.1|  446|Homo sapiens calcium binding and coi...    30   7.2  
AK223227-1|BAD96947.1|  446|Homo sapiens nuclear domain 10 prote...    30   7.2  
AK222666-1|BAD96386.1|  429|Homo sapiens nuclear domain 10 prote...    30   7.2  

>U22897-1|AAA75297.1|  446|Homo sapiens NDP52 protein.
          Length = 446

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = +1

Query: 46  EDVEITGGSILLQKQLGDMEGEVKEIQMEIAAIK--RDRLDVMTKKQMNVFTPE 201
           E+ E+    I LQKQ  DM+ E+++ Q E+  ++    +L++  K+Q + +  E
Sbjct: 155 ENQELKDSCISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETE 208


>CR456763-1|CAG33044.1|  446|Homo sapiens NDP52 protein.
          Length = 446

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = +1

Query: 46  EDVEITGGSILLQKQLGDMEGEVKEIQMEIAAIK--RDRLDVMTKKQMNVFTPE 201
           E+ E+    I LQKQ  DM+ E+++ Q E+  ++    +L++  K+Q + +  E
Sbjct: 155 ENQELKDSCISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETE 208


>BC015893-1|AAH15893.1|  446|Homo sapiens calcium binding and
           coiled-coil domain 2 protein.
          Length = 446

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = +1

Query: 46  EDVEITGGSILLQKQLGDMEGEVKEIQMEIAAIK--RDRLDVMTKKQMNVFTPE 201
           E+ E+    I LQKQ  DM+ E+++ Q E+  ++    +L++  K+Q + +  E
Sbjct: 155 ENQELKDSCISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETE 208


>BC004130-1|AAH04130.1|  446|Homo sapiens calcium binding and
           coiled-coil domain 2 protein.
          Length = 446

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = +1

Query: 46  EDVEITGGSILLQKQLGDMEGEVKEIQMEIAAIK--RDRLDVMTKKQMNVFTPE 201
           E+ E+    I LQKQ  DM+ E+++ Q E+  ++    +L++  K+Q + +  E
Sbjct: 155 ENQELKDSCISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETE 208


>AK223227-1|BAD96947.1|  446|Homo sapiens nuclear domain 10 protein
           variant protein.
          Length = 446

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = +1

Query: 46  EDVEITGGSILLQKQLGDMEGEVKEIQMEIAAIK--RDRLDVMTKKQMNVFTPE 201
           E+ E+    I LQKQ  DM+ E+++ Q E+  ++    +L++  K+Q + +  E
Sbjct: 155 ENQELKDSCISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETE 208


>AK222666-1|BAD96386.1|  429|Homo sapiens nuclear domain 10 protein
           variant protein.
          Length = 429

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = +1

Query: 46  EDVEITGGSILLQKQLGDMEGEVKEIQMEIAAIK--RDRLDVMTKKQMNVFTPE 201
           E+ E+    I LQKQ  DM+ E+++ Q E+  ++    +L++  K+Q + +  E
Sbjct: 155 ENQELKDSCISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETE 208


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,007,718
Number of Sequences: 237096
Number of extensions: 1404862
Number of successful extensions: 3196
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3195
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)