Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0880
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome ass...    44   2e-04
BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p pro...    44   2e-04
AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA...    44   2e-04
AY058402-1|AAL13631.1|  375|Drosophila melanogaster GH17085p pro...    42   8e-04
AL109630-5|CAB65874.1|  375|Drosophila melanogaster EG:BACR7A4.1...    42   8e-04
AE014298-125|AAF45565.2|  375|Drosophila melanogaster CG3708-PA ...    42   8e-04
AF172941-1|AAD56359.1| 1084|Drosophila melanogaster anon-15Ab pr...    29   6.3  
AE014298-2443|AAF48640.1| 1084|Drosophila melanogaster CG15865-P...    29   6.3  
AE013599-3157|AAF46695.3|  436|Drosophila melanogaster CG9480-PA...    29   6.3  

>U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome
           assembly protein NAP-1 protein.
          Length = 370

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +3

Query: 519 KGIPDFWYNIFRNVSMLSEMMQEHDE 596
           KGIP FW  +FRN +++SEM+Q HDE
Sbjct: 144 KGIPGFWLTVFRNTAIMSEMVQPHDE 169


>BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p
           protein.
          Length = 370

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +3

Query: 519 KGIPDFWYNIFRNVSMLSEMMQEHDE 596
           KGIP FW  +FRN +++SEM+Q HDE
Sbjct: 144 KGIPGFWLTVFRNTAIMSEMVQPHDE 169


>AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA
           protein.
          Length = 370

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +3

Query: 519 KGIPDFWYNIFRNVSMLSEMMQEHDE 596
           KGIP FW  +FRN +++SEM+Q HDE
Sbjct: 144 KGIPGFWLTVFRNTAIMSEMVQPHDE 169


>AY058402-1|AAL13631.1|  375|Drosophila melanogaster GH17085p
           protein.
          Length = 375

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 14/25 (56%), Positives = 21/25 (84%)
 Frame = +3

Query: 522 GIPDFWYNIFRNVSMLSEMMQEHDE 596
           G+P FW  +F+NV +LSE++Q+HDE
Sbjct: 177 GVPRFWLTVFQNVPLLSELVQDHDE 201


>AL109630-5|CAB65874.1|  375|Drosophila melanogaster EG:BACR7A4.18
           protein.
          Length = 375

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 14/25 (56%), Positives = 21/25 (84%)
 Frame = +3

Query: 522 GIPDFWYNIFRNVSMLSEMMQEHDE 596
           G+P FW  +F+NV +LSE++Q+HDE
Sbjct: 177 GVPRFWLTVFQNVPLLSELVQDHDE 201


>AE014298-125|AAF45565.2|  375|Drosophila melanogaster CG3708-PA
           protein.
          Length = 375

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 14/25 (56%), Positives = 21/25 (84%)
 Frame = +3

Query: 522 GIPDFWYNIFRNVSMLSEMMQEHDE 596
           G+P FW  +F+NV +LSE++Q+HDE
Sbjct: 177 GVPRFWLTVFQNVPLLSELVQDHDE 201


>AF172941-1|AAD56359.1| 1084|Drosophila melanogaster anon-15Ab
           protein.
          Length = 1084

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 392 CLNPWRDDTEEEELARAVQNAAITEGEEKKDD 487
           CL PW + T++EE + A  ++   E +E   D
Sbjct: 369 CLPPWLEQTDDEESSSAASSSDEDEKDEANSD 400


>AE014298-2443|AAF48640.1| 1084|Drosophila melanogaster CG15865-PA
           protein.
          Length = 1084

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 392 CLNPWRDDTEEEELARAVQNAAITEGEEKKDD 487
           CL PW + T++EE + A  ++   E +E   D
Sbjct: 369 CLPPWLEQTDDEESSSAASSSDEDEKDEANSD 400


>AE013599-3157|AAF46695.3|  436|Drosophila melanogaster CG9480-PA,
           isoform A protein.
          Length = 436

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +2

Query: 359 VNGTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIE 499
           V   Y+P   +  NP  DDT+EEE+    +   I  GE  K+ K IE
Sbjct: 362 VKTVYDPVPSQKSNP--DDTDEEEIIEEYEEEIIEPGE--KNVKTIE 404


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,929,088
Number of Sequences: 53049
Number of extensions: 445576
Number of successful extensions: 1261
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)