Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0879
         (648 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    25   0.83 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   1.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   1.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.9  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   3.4  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   3.4  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   4.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.8  

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 543 GARNFSTCSLDNQHRHPVLSWRNYFPYLDYSLLIFLGVH 427
           G RNFSTCS      HP  +      ++ Y  L F+ VH
Sbjct: 113 GCRNFSTCS-----SHPTAA------FISYGTLFFIYVH 140


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 91  WSLGIPDYRSEDVGLYARSNHKPIQY 168
           W+  IP+   +DV +Y R N + + Y
Sbjct: 661 WNFTIPNMYFKDVFIYNRPNEESMNY 686


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 91  WSLGIPDYRSEDVGLYARSNHKPIQY 168
           W+  IP+   +DV +Y R N + + Y
Sbjct: 661 WNFTIPNMYFKDVFIYNRPNEESMNY 686


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 148  YYGHTDQHPPICSQEYLTTTNFISVLLH 65
            +Y  T Q PP     Y+T++   S+LLH
Sbjct: 1396 HYTLTVQVPPSAPVLYVTSSTSSSILLH 1423


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 148  YYGHTDQHPPICSQEYLTTTNFISVLLH 65
            +Y  T Q PP     Y+T++   S+LLH
Sbjct: 1392 HYTLTVQVPPSAPVLYVTSSTSSSILLH 1419


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 543 GARNFSTCSLDNQHRHPVLSWRNY 472
           G RNFSTCS      HP  ++ +Y
Sbjct: 112 GCRNFSTCS-----SHPTAAFISY 130


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = +3

Query: 285 EKKGKVTSIVTQNVDRLHHK 344
           +K+G + S+V+  +DRLH++
Sbjct: 697 DKEGYLHSVVSGALDRLHYE 716


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -1

Query: 618 TRYLGTLSPKNTISGFKGPSHLGQSGARNFSTCSLDNQHRHP 493
           T  +G L+   ++ G+K  + L Q   +   TC + N H  P
Sbjct: 297 TLIVGALAGLLSVLGYKYITPLIQKHLKIHDTCGVHNLHGMP 338


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 109 DYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRY 207
           DY    + L   + H P+ YQ + K   + Q+Y
Sbjct: 416 DYTPSSLELGEVAVHDPVFYQLYKKVMNLYQQY 448


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,338
Number of Sequences: 438
Number of extensions: 4603
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)