Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0879
(648 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09230.6 68418.m01054 transcriptional regulator Sir2 family p... 73 1e-13
At5g09230.5 68418.m01052 transcriptional regulator Sir2 family p... 73 1e-13
At5g09230.4 68418.m01053 transcriptional regulator Sir2 family p... 73 1e-13
At5g09230.3 68418.m01049 transcriptional regulator Sir2 family p... 73 1e-13
At5g09230.2 68418.m01051 transcriptional regulator Sir2 family p... 73 1e-13
At5g09230.1 68418.m01050 transcriptional regulator Sir2 family p... 73 1e-13
At5g55760.1 68418.m06950 transcriptional regulator Sir2 family p... 51 8e-07
At5g34900.1 68418.m04114 Ulp1 protease family protein contains P... 30 1.5
At3g47260.1 68416.m05133 Ulp1 protease family protein contains P... 30 1.5
At3g44500.1 68416.m04783 Ulp1 protease family protein similar to... 30 1.5
At2g14130.1 68415.m01574 Ulp1 protease family protein contains P... 30 1.5
At1g73180.1 68414.m08469 eukaryotic translation initiation facto... 30 1.5
At2g45920.1 68415.m05710 U-box domain-containing protein contain... 29 2.7
At1g59500.1 68414.m06680 auxin-responsive GH3 family protein sim... 28 4.7
At4g04010.1 68417.m00571 Ulp1 protease family protein contains P... 28 6.1
At1g48990.1 68414.m05492 glycine-rich protein / oleosin contains... 28 6.1
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 28 6.1
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 28 6.1
At2g25080.1 68415.m03001 phospholipid hydroperoxide glutathione ... 27 8.1
At1g64410.1 68414.m07301 hypothetical protein 27 8.1
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 27 8.1
>At5g09230.6 68418.m01054 transcriptional regulator Sir2 family
protein contains Pfam domain PF02146: transcriptional
regulator, Sir2 family;
Length = 271
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Frame = +3
Query: 264 HLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQ-- 437
H + LEK G++ ++TQNVDRLHH+AGS+ +ELHGT Y V CL+C + R Q
Sbjct: 59 HTALASLEKAGRINFMITQNVDRLHHRAGSDP-LELHGTVYTVMCLECGFSFPRDLFQDQ 117
Query: 438 ------------EILTENNPDMESSFSM-IRPDGDVD 509
E + +P E SF M RPDGD++
Sbjct: 118 LKAINPKWAEAIESIDHGDPGSEKSFGMKQRPDGDIE 154
Score = 53.6 bits (123), Expect = 1e-07
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 527 EKFRAPLCPKCEGPLKPDIVFFGDNVPKYRVEQ 625
E F P+C KC+G LKPD++FFGDN+PK R Q
Sbjct: 162 EGFHIPVCEKCKGVLKPDVIFFGDNIPKERATQ 194
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +1
Query: 91 WSLGIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
W+ G+ + + + ++N+ +EF + + R+RYWAR+Y GW RF+ QP
Sbjct: 2 WNSGLQKSQWS-IQFWFQTNYPSGDLKEFTRSSRARRRYWARSYAGWRRFTAAQP 55
>At5g09230.5 68418.m01052 transcriptional regulator Sir2 family
protein contains Pfam domain PF02146: transcriptional
regulator, Sir2 family;
Length = 354
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Frame = +3
Query: 264 HLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQ-- 437
H + LEK G++ ++TQNVDRLHH+AGS+ +ELHGT Y V CL+C + R Q
Sbjct: 142 HTALASLEKAGRINFMITQNVDRLHHRAGSDP-LELHGTVYTVMCLECGFSFPRDLFQDQ 200
Query: 438 ------------EILTENNPDMESSFSM-IRPDGDVD 509
E + +P E SF M RPDGD++
Sbjct: 201 LKAINPKWAEAIESIDHGDPGSEKSFGMKQRPDGDIE 237
Score = 64.9 bits (151), Expect = 4e-11
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = +1
Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
GIPDYRS + G Y+ S KPI +QEF + + R+RYWAR+Y GW RF+ QP
Sbjct: 89 GIPDYRSPN-GAYS-SGFKPITHQEFTRSSRARRRYWARSYAGWRRFTAAQP 138
Score = 53.6 bits (123), Expect = 1e-07
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 527 EKFRAPLCPKCEGPLKPDIVFFGDNVPKYRVEQ 625
E F P+C KC+G LKPD++FFGDN+PK R Q
Sbjct: 245 EGFHIPVCEKCKGVLKPDVIFFGDNIPKERATQ 277
>At5g09230.4 68418.m01053 transcriptional regulator Sir2 family
protein contains Pfam domain PF02146: transcriptional
regulator, Sir2 family;
Length = 271
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Frame = +3
Query: 264 HLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQ-- 437
H + LEK G++ ++TQNVDRLHH+AGS+ +ELHGT Y V CL+C + R Q
Sbjct: 59 HTALASLEKAGRINFMITQNVDRLHHRAGSDP-LELHGTVYTVMCLECGFSFPRDLFQDQ 117
Query: 438 ------------EILTENNPDMESSFSM-IRPDGDVD 509
E + +P E SF M RPDGD++
Sbjct: 118 LKAINPKWAEAIESIDHGDPGSEKSFGMKQRPDGDIE 154
Score = 53.6 bits (123), Expect = 1e-07
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 527 EKFRAPLCPKCEGPLKPDIVFFGDNVPKYRVEQ 625
E F P+C KC+G LKPD++FFGDN+PK R Q
Sbjct: 162 EGFHIPVCEKCKGVLKPDVIFFGDNIPKERATQ 194
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +1
Query: 91 WSLGIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
W+ G+ + + + ++N+ +EF + + R+RYWAR+Y GW RF+ QP
Sbjct: 2 WNSGLQKSQWS-IQFWFQTNYPSGDLKEFTRSSRARRRYWARSYAGWRRFTAAQP 55
>At5g09230.3 68418.m01049 transcriptional regulator Sir2 family
protein contains Pfam domain PF02146: transcriptional
regulator, Sir2 family;
Length = 324
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Frame = +3
Query: 264 HLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQ-- 437
H + LEK G++ ++TQNVDRLHH+AGS+ +ELHGT Y V CL+C + R Q
Sbjct: 161 HTALASLEKAGRINFMITQNVDRLHHRAGSDP-LELHGTVYTVMCLECGFSFPRDLFQDQ 219
Query: 438 ------------EILTENNPDMESSFSM-IRPDGDVD 509
E + +P E SF M RPDGD++
Sbjct: 220 LKAINPKWAEAIESIDHGDPGSEKSFGMKQRPDGDIE 256
Score = 64.9 bits (151), Expect = 4e-11
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = +1
Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
GIPDYRS + G Y+ S KPI +QEF + + R+RYWAR+Y GW RF+ QP
Sbjct: 108 GIPDYRSPN-GAYS-SGFKPITHQEFTRSSRARRRYWARSYAGWRRFTAAQP 157
Score = 53.6 bits (123), Expect = 1e-07
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 527 EKFRAPLCPKCEGPLKPDIVFFGDNVPKYRVEQ 625
E F P+C KC+G LKPD++FFGDN+PK R Q
Sbjct: 264 EGFHIPVCEKCKGVLKPDVIFFGDNIPKERATQ 296
>At5g09230.2 68418.m01051 transcriptional regulator Sir2 family
protein contains Pfam domain PF02146: transcriptional
regulator, Sir2 family;
Length = 373
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Frame = +3
Query: 264 HLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQ-- 437
H + LEK G++ ++TQNVDRLHH+AGS+ +ELHGT Y V CL+C + R Q
Sbjct: 161 HTALASLEKAGRINFMITQNVDRLHHRAGSDP-LELHGTVYTVMCLECGFSFPRDLFQDQ 219
Query: 438 ------------EILTENNPDMESSFSM-IRPDGDVD 509
E + +P E SF M RPDGD++
Sbjct: 220 LKAINPKWAEAIESIDHGDPGSEKSFGMKQRPDGDIE 256
Score = 64.9 bits (151), Expect = 4e-11
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = +1
Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
GIPDYRS + G Y+ S KPI +QEF + + R+RYWAR+Y GW RF+ QP
Sbjct: 108 GIPDYRSPN-GAYS-SGFKPITHQEFTRSSRARRRYWARSYAGWRRFTAAQP 157
Score = 53.6 bits (123), Expect = 1e-07
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 527 EKFRAPLCPKCEGPLKPDIVFFGDNVPKYRVEQ 625
E F P+C KC+G LKPD++FFGDN+PK R Q
Sbjct: 264 EGFHIPVCEKCKGVLKPDVIFFGDNIPKERATQ 296
>At5g09230.1 68418.m01050 transcriptional regulator Sir2 family
protein contains Pfam domain PF02146: transcriptional
regulator, Sir2 family;
Length = 373
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Frame = +3
Query: 264 HLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQ-- 437
H + LEK G++ ++TQNVDRLHH+AGS+ +ELHGT Y V CL+C + R Q
Sbjct: 161 HTALASLEKAGRINFMITQNVDRLHHRAGSDP-LELHGTVYTVMCLECGFSFPRDLFQDQ 219
Query: 438 ------------EILTENNPDMESSFSM-IRPDGDVD 509
E + +P E SF M RPDGD++
Sbjct: 220 LKAINPKWAEAIESIDHGDPGSEKSFGMKQRPDGDIE 256
Score = 64.9 bits (151), Expect = 4e-11
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = +1
Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
GIPDYRS + G Y+ S KPI +QEF + + R+RYWAR+Y GW RF+ QP
Sbjct: 108 GIPDYRSPN-GAYS-SGFKPITHQEFTRSSRARRRYWARSYAGWRRFTAAQP 157
Score = 53.6 bits (123), Expect = 1e-07
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 527 EKFRAPLCPKCEGPLKPDIVFFGDNVPKYRVEQ 625
E F P+C KC+G LKPD++FFGDN+PK R Q
Sbjct: 264 EGFHIPVCEKCKGVLKPDVIFFGDNIPKERATQ 296
>At5g55760.1 68418.m06950 transcriptional regulator Sir2 family
protein contains Pfam domain PF02146: transcriptional
regulator, Sir2 family
Length = 473
Score = 50.8 bits (116), Expect = 8e-07
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Frame = +3
Query: 255 NVTHLCIRELEKKGKVTSIVTQNVDRLHHKAG--SEKVIELHGTSYLVQCLKCPYE 416
++TH+ + ELE+ G + +++QNVD LH ++G EK+ ELHG S++ C C E
Sbjct: 93 SMTHMALVELERAGILKFVISQNVDGLHLRSGIPREKLSELHGDSFMEMCPSCGAE 148
>At5g34900.1 68418.m04114 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At4g04010,
At2g06430, At2g15140, At2g04980, At2g14130, At3g44500,
At2g15190, At3g47260, At3g29210, At2g02210, At3g32900
Length = 767
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 19 IKFSLNVFYTTHGVLCEVVH 78
I+FSL FY T G+ CE VH
Sbjct: 103 IRFSLREFYLTTGIQCEPVH 122
>At3g47260.1 68416.m05133 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At4g04010,
At2g06430, At2g15140, At2g04980, At2g14130, At3g44500,
At2g15190, At5g34900, At3g29210, At2g02210, At3g32900
Length = 820
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 19 IKFSLNVFYTTHGVLCEVVH 78
I+FSL FY T G+ CE VH
Sbjct: 103 IRFSLREFYLTTGIQCEPVH 122
>At3g44500.1 68416.m04783 Ulp1 protease family protein similar to
At1g32840, At4g04010, At2g06430, At2g15140, At2g04980,
At2g14130, At2g15190, At3g47260, At5g34900, At3g29210,
At2g02210, At3g32900
Length = 805
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 19 IKFSLNVFYTTHGVLCEVVH 78
I+FSL FY T G+ CE VH
Sbjct: 103 IRFSLREFYLTTGIQCEPVH 122
>At2g14130.1 68415.m01574 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At4g04010,
At2g06430, At2g15140, At2g04980, At3g44500, At2g15190,
At3g47260, At5g34900, At3g29210, At2g02210, At3g32900
Length = 808
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 19 IKFSLNVFYTTHGVLCEVVH 78
I+FSL FY T G+ CE VH
Sbjct: 103 IRFSLREFYLTTGIQCEPVH 122
>At1g73180.1 68414.m08469 eukaryotic translation initiation
factor-related similar to eukaryotic translation
initiation factor 2A (GI:21956484) [Homo sapiens];
similar to Eukaryotic translation initiation factor 3
subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b)
(Swiss-Prot:P55884) [Homo sapiens]
Length = 513
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = -2
Query: 593 QKTLYLVSKALHTWGRVELGIFLLVPSTINIAIRSYHGETTFH 465
+++ + S +W G+ ++V S ++ +SY+GET H
Sbjct: 213 RRSFFRCSSVQFSWNHGSTGLLVVVQSDVDKTNQSYYGETKLH 255
>At2g45920.1 68415.m05710 U-box domain-containing protein contains
Pfam profile PF04564: U-box domain
Length = 400
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 189 ESKAKVLGKKLYRLAEIQLCATNVTHLCIRELEKKGKVTSIVTQNVDRLHHKAGSE 356
E K+L K L + ++Q+CA + H+ + +E KG + I +NV +L A S+
Sbjct: 57 EKTQKILDKYLQKCRQMQVCA-EMIHIKMESVE-KGIIQLISERNVKKLVMGAASD 110
>At1g59500.1 68414.m06680 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 597
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 366 QSLFQNQLCGVIYPHSVSL*MSLFPSSLV 280
QS++ LCG++ H V+ ++FPS L+
Sbjct: 206 QSMYTQMLCGLLMRHEVNRLGAVFPSGLL 234
>At4g04010.1 68417.m00571 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At2g06430,
At2g15140, At2g04980, At2g14130, At3g44500, At2g15190,
At3g47260, At5g34900, At3g29210, At2g02210, At3g32900
Length = 836
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 19 IKFSLNVFYTTHGVLCEVVH 78
I FSL FY T G+ CE VH
Sbjct: 103 ICFSLREFYLTTGIQCEPVH 122
>At1g48990.1 68414.m05492 glycine-rich protein / oleosin contains
Pfam profile: PF01277 oleosin
Length = 169
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 231 PTYIISCPVPLPYFRILHKFLILYRFVITTG 139
P IIS P+ +P F I+ FL L ++ TG
Sbjct: 85 PLIIISSPIWIPLFLIVTGFLSLAGLILATG 115
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 245 VCNQRHTSLYSRTREEGKSDIYSDTECG*ITPQSW 349
+CN S S++RE G SD + T G + Q W
Sbjct: 7 LCNTNWGSSSSKSREPGSSDCGNSTFAGFTSQQKW 41
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 245 VCNQRHTSLYSRTREEGKSDIYSDTECG*ITPQSW 349
+CN S S++RE G SD + T G + Q W
Sbjct: 7 LCNTNWGSSSSKSREPGSSDCGNSTFAGFTSQQKW 41
>At2g25080.1 68415.m03001 phospholipid hydroperoxide glutathione
peroxidase, chloroplast / PHGPx (GPX1) identical to
SP|P52032 Phospholipid hydroperoxide glutathione
peroxidase, chloroplast precursor (EC 1.11.1.9) (PHGPx)
{Arabidopsis thaliana}; contains Glutathione peroxidases
signatures, Glutathione_Peroxid_1 [GKVMLIVNVASRCGLT],
Glutathione_Peroxid_2 [LAFPCNQF]; contains EST
GB:T43669, N38679, R30227, H37043, AA042773; identical
to cDNA chloroplast mRNA for glutathione peroxidase
GI:2274856
Length = 236
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = -3
Query: 376 PCNSITFSEPALWCNLSTF-CVTIDVTFPFFSSSRIQRCVTLVAHN*ISANLYNFL 212
PCN F EP + F C FP F + T + + +N FL
Sbjct: 139 PCNQFGFQEPGSNSEIKQFACTRFKAEFPIFDKVDVNGPSTAPIYEFLKSNAGGFL 194
>At1g64410.1 68414.m07301 hypothetical protein
Length = 1231
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKY-PKVRQRYWARNYIGW 231
G P YR D G+Y N + + Y K+ RY A + W
Sbjct: 522 GFPVYRRRDTGIYVEKNGFQCDNRYVIPYNEKLSLRYQAHINVEW 566
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -1
Query: 597 SPKNTISGFKGPSHLGQSGARNFSTCSL-DNQHRHPVLSWRNYFPYLDYSLLIFLGVHVC 421
SPK + SG K P L + + ++ ++ P SW++ +L+Y L+ + +V
Sbjct: 1489 SPKES-SGDKSPQKLSDDNSPSKEGQAVKSSEENSPASSWQSIIEFLNYILITWKKNYVP 1547
Query: 420 LF 415
LF
Sbjct: 1548 LF 1549
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,884,211
Number of Sequences: 28952
Number of extensions: 331665
Number of successful extensions: 967
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -