Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0868
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.3  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   5.3  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   5.3  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   5.3  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   5.3  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   5.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   6.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   9.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.2  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 379 IFYSSYKKIDNLF 341
           +FY  YKK+ NL+
Sbjct: 433 VFYQLYKKVMNLY 445


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 595 IIATLTYPLAHFXHLXGGQINY 530
           +IA +T+P+A+F  L    I+Y
Sbjct: 464 VIARITFPVAYFMFLTFFFIHY 485


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 595 IIATLTYPLAHFXHLXGGQINY 530
           +IA +T+P+A+F  L    I+Y
Sbjct: 450 VIARITFPVAYFMFLTFFFIHY 471


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 595 IIATLTYPLAHFXHLXGGQINY 530
           +IA +T+P+A+F  L    I+Y
Sbjct: 484 VIARITFPVAYFMFLTFFFIHY 505


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 595 IIATLTYPLAHFXHLXGGQINY 530
           +IA +T+P+A+F  L    I+Y
Sbjct: 433 VIARITFPVAYFMFLTFFFIHY 454


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 159 LSNVSVQFSSGFHHV 115
           LS  +V ++SGF+H+
Sbjct: 109 LSPAAVSYTSGFYHI 123


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 166 ENEQGRNEPEDSIT 207
           ENE G ++P D++T
Sbjct: 955 ENEIGASDPSDTVT 968


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 222 HGGGVSDAVLGLVPPLFIL 166
           HGGG+  A+L  +  L +L
Sbjct: 7   HGGGMVSAILSSIVLLLLL 25


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 128 PEENCTETLLRERRMNR 178
           PEEN  E LL    +NR
Sbjct: 40  PEENVVEELLSPLTLNR 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,204
Number of Sequences: 438
Number of extensions: 2272
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)