Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0867
(598 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32944-1|AAB04149.1| 89|Homo sapiens cytoplasmic dynein light ... 107 3e-23
CR542128-1|CAG46925.1| 89|Homo sapiens DNCL1 protein. 107 3e-23
CR407672-1|CAG28600.1| 89|Homo sapiens DNCL1 protein. 107 3e-23
BC104245-1|AAI04246.1| 89|Homo sapiens dynein, light chain, LC... 107 3e-23
BC104244-1|AAI04245.1| 89|Homo sapiens dynein, light chain, LC... 107 3e-23
BC100289-1|AAI00290.1| 89|Homo sapiens dynein, light chain, LC... 107 3e-23
BC010744-1|AAH10744.1| 89|Homo sapiens dynein, light chain, LC... 105 9e-23
AF112997-1|AAP97230.1| 89|Homo sapiens protein inhibitor of ne... 105 9e-23
CR542177-1|CAG46974.1| 105|Homo sapiens DNAL4 protein. 38 0.027
CR456487-1|CAG30373.1| 105|Homo sapiens DNAL4 protein. 38 0.027
BT009847-1|AAP88849.1| 105|Homo sapiens dynein, axonemal, light... 38 0.027
BC002968-1|AAH02968.1| 105|Homo sapiens dynein, axonemal, light... 38 0.027
AY453399-1|AAS47516.1| 105|Homo sapiens proliferation-inducing ... 38 0.027
AL035366-1|CAA23018.1| 105|Homo sapiens hypothetical protein pr... 38 0.027
AL008583-1|CAA15429.1| 105|Homo sapiens dynein, axonemal, light... 38 0.027
AK223349-1|BAD97069.1| 105|Homo sapiens dynein light chain 4, a... 37 0.062
CR542195-1|CAG46992.1| 105|Homo sapiens DNAL4 protein. 36 0.11
J05070-1|AAA51539.1| 707|Homo sapiens CLG4A protein. 30 5.4
DQ194553-1|ABA03169.1| 707|Homo sapiens matrix metallopeptidase... 30 5.4
BC006093-1|AAH06093.1| 707|Homo sapiens matrix metallopeptidase... 30 5.4
AL162458-5|CAC10459.1| 707|Homo sapiens matrix metallopeptidase... 30 5.4
AF538844-1|AAM97934.1| 707|Homo sapiens matrix metalloproteinas... 30 5.4
>U32944-1|AAB04149.1| 89|Homo sapiens cytoplasmic dynein light
chain 1 protein.
Length = 89
Score = 107 bits (257), Expect = 3e-23
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPT
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPT 53
Score = 63.3 bits (147), Expect = 6e-10
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQ 334
HCIVGRNFGSYVTHET+HFIYFYLGQ
Sbjct: 55 HCIVGRNFGSYVTHETKHFIYFYLGQ 80
>CR542128-1|CAG46925.1| 89|Homo sapiens DNCL1 protein.
Length = 89
Score = 107 bits (257), Expect = 3e-23
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPT
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPT 53
Score = 63.3 bits (147), Expect = 6e-10
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQ 334
HCIVGRNFGSYVTHET+HFIYFYLGQ
Sbjct: 55 HCIVGRNFGSYVTHETKHFIYFYLGQ 80
>CR407672-1|CAG28600.1| 89|Homo sapiens DNCL1 protein.
Length = 89
Score = 107 bits (257), Expect = 3e-23
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPT
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPT 53
Score = 63.3 bits (147), Expect = 6e-10
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQ 334
HCIVGRNFGSYVTHET+HFIYFYLGQ
Sbjct: 55 HCIVGRNFGSYVTHETKHFIYFYLGQ 80
>BC104245-1|AAI04246.1| 89|Homo sapiens dynein, light chain,
LC8-type 1 protein.
Length = 89
Score = 107 bits (257), Expect = 3e-23
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPT
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPT 53
Score = 63.3 bits (147), Expect = 6e-10
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQ 334
HCIVGRNFGSYVTHET+HFIYFYLGQ
Sbjct: 55 HCIVGRNFGSYVTHETKHFIYFYLGQ 80
>BC104244-1|AAI04245.1| 89|Homo sapiens dynein, light chain,
LC8-type 1 protein.
Length = 89
Score = 107 bits (257), Expect = 3e-23
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPT
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPT 53
Score = 63.3 bits (147), Expect = 6e-10
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQ 334
HCIVGRNFGSYVTHET+HFIYFYLGQ
Sbjct: 55 HCIVGRNFGSYVTHETKHFIYFYLGQ 80
>BC100289-1|AAI00290.1| 89|Homo sapiens dynein, light chain,
LC8-type 1 protein.
Length = 89
Score = 107 bits (257), Expect = 3e-23
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPT
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPT 53
Score = 63.3 bits (147), Expect = 6e-10
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQ 334
HCIVGRNFGSYVTHET+HFIYFYLGQ
Sbjct: 55 HCIVGRNFGSYVTHETKHFIYFYLGQ 80
>BC010744-1|AAH10744.1| 89|Homo sapiens dynein, light chain,
LC8-type 2 protein.
Length = 89
Score = 105 bits (253), Expect = 9e-23
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
M DRKAVIKNADMSE+MQQDAVDCATQA+EK+NIEKDIAA+IKKEFDKKYNPT
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPT 53
Score = 63.3 bits (147), Expect = 6e-10
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQ 334
HCIVGRNFGSYVTHET+HFIYFYLGQ
Sbjct: 55 HCIVGRNFGSYVTHETKHFIYFYLGQ 80
>AF112997-1|AAP97230.1| 89|Homo sapiens protein inhibitor of
neuronal nitric oxide synthase protein.
Length = 89
Score = 105 bits (253), Expect = 9e-23
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
M DRKAVIKNADMSE+MQQDAVDCATQA+EK+NIEKDIAA+IKKEFDKKYNPT
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPT 53
Score = 63.3 bits (147), Expect = 6e-10
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2
Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQ 334
HCIVGRNFGSYVTHET+HFIYFYLGQ
Sbjct: 55 HCIVGRNFGSYVTHETKHFIYFYLGQ 80
>CR542177-1|CAG46974.1| 105|Homo sapiens DNAL4 protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.027
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ + ++ A EKF N + A IK+ DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.9 bits (74), Expect = 0.44
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 221 QERI*QEIQSYRHCIVGRNFGSYVTHETRHFIYFYLG 331
+E + ++ S H ++G FG +THE ++ +Y Y G
Sbjct: 58 KETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG 94
>CR456487-1|CAG30373.1| 105|Homo sapiens DNAL4 protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.027
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ + ++ A EKF N + A IK+ DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.9 bits (74), Expect = 0.44
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 221 QERI*QEIQSYRHCIVGRNFGSYVTHETRHFIYFYLG 331
+E + ++ S H ++G FG +THE ++ +Y Y G
Sbjct: 58 KETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG 94
>BT009847-1|AAP88849.1| 105|Homo sapiens dynein, axonemal, light
polypeptide 4 protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.027
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ + ++ A EKF N + A IK+ DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.9 bits (74), Expect = 0.44
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 221 QERI*QEIQSYRHCIVGRNFGSYVTHETRHFIYFYLG 331
+E + ++ S H ++G FG +THE ++ +Y Y G
Sbjct: 58 KETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG 94
>BC002968-1|AAH02968.1| 105|Homo sapiens dynein, axonemal, light
chain 4 protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.027
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ + ++ A EKF N + A IK+ DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.9 bits (74), Expect = 0.44
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 221 QERI*QEIQSYRHCIVGRNFGSYVTHETRHFIYFYLG 331
+E + ++ S H ++G FG +THE ++ +Y Y G
Sbjct: 58 KETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG 94
>AY453399-1|AAS47516.1| 105|Homo sapiens proliferation-inducing
protein 27 protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.027
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ + ++ A EKF N + A IK+ DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.9 bits (74), Expect = 0.44
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 221 QERI*QEIQSYRHCIVGRNFGSYVTHETRHFIYFYLG 331
+E + ++ S H ++G FG +THE ++ +Y Y G
Sbjct: 58 KETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG 94
>AL035366-1|CAA23018.1| 105|Homo sapiens hypothetical protein
protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.027
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ + ++ A EKF N + A IK+ DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.9 bits (74), Expect = 0.44
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 221 QERI*QEIQSYRHCIVGRNFGSYVTHETRHFIYFYLG 331
+E + ++ S H ++G FG +THE ++ +Y Y G
Sbjct: 58 KETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG 94
>AL008583-1|CAA15429.1| 105|Homo sapiens dynein, axonemal, light
chain 4 protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.027
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ + ++ A EKF N + A IK+ DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.9 bits (74), Expect = 0.44
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 221 QERI*QEIQSYRHCIVGRNFGSYVTHETRHFIYFYLG 331
+E + ++ S H ++G FG +THE ++ +Y Y G
Sbjct: 58 KETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG 94
>AK223349-1|BAD97069.1| 105|Homo sapiens dynein light chain 4,
axonemal variant protein.
Length = 105
Score = 36.7 bits (81), Expect = 0.062
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ ++ A EKF N + A IK+ DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVGTMELCVTACEKFSNNNESAAKMIKETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.9 bits (74), Expect = 0.44
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 221 QERI*QEIQSYRHCIVGRNFGSYVTHETRHFIYFYLG 331
+E + ++ S H ++G FG +THE ++ +Y Y G
Sbjct: 58 KETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG 94
>CR542195-1|CAG46992.1| 105|Homo sapiens DNAL4 protein.
Length = 105
Score = 35.9 bits (79), Expect = 0.11
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ + ++ A EKF N + A I + DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMINETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.5 bits (73), Expect = 0.58
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 257 HCIVGRNFGSYVTHETRHFIYFYLG 331
H ++G FG +THE ++ +Y Y G
Sbjct: 70 HVVIGEGFGFEITHEVKNLLYLYFG 94
>J05070-1|AAA51539.1| 707|Homo sapiens CLG4A protein.
Length = 707
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = -2
Query: 516 QHYLASSCHTLAASYLWECTTARASHENLQGY---PSDNTASAANKKIEVMLNGLTALKE 346
Q Y A + + Y W TTA + L G+ +D+T N E+ + T L +
Sbjct: 297 QSYSACTTDGRSDGYRWCATTANYDRDKLFGFCPTRADSTVMGGNSAGELCVFPFTFLGK 356
Query: 345 QYSHC 331
+YS C
Sbjct: 357 EYSTC 361
>DQ194553-1|ABA03169.1| 707|Homo sapiens matrix metallopeptidase 9
(gelatinase B, 92kDa gelatinase, 92kDa type IV collag
protein.
Length = 707
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = -2
Query: 516 QHYLASSCHTLAASYLWECTTARASHENLQGY---PSDNTASAANKKIEVMLNGLTALKE 346
Q Y A + + Y W TTA + L G+ +D+T N E+ + T L +
Sbjct: 297 QSYSACTTDGRSDGYRWCATTANYDRDKLFGFCPTRADSTVMGGNSAGELCVFPFTFLGK 356
Query: 345 QYSHC 331
+YS C
Sbjct: 357 EYSTC 361
>BC006093-1|AAH06093.1| 707|Homo sapiens matrix metallopeptidase 9
(gelatinase B, 92kDa gelatinase, 92kDa type IV collag
protein.
Length = 707
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = -2
Query: 516 QHYLASSCHTLAASYLWECTTARASHENLQGY---PSDNTASAANKKIEVMLNGLTALKE 346
Q Y A + + Y W TTA + L G+ +D+T N E+ + T L +
Sbjct: 297 QSYSACTTDGRSDGYRWCATTANYDRDKLFGFCPTRADSTVMGGNSAGELCVFPFTFLGK 356
Query: 345 QYSHC 331
+YS C
Sbjct: 357 EYSTC 361
>AL162458-5|CAC10459.1| 707|Homo sapiens matrix metallopeptidase 9
(gelatinase B, 92kDa gelatinase, 92kDa type IV collag
protein.
Length = 707
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = -2
Query: 516 QHYLASSCHTLAASYLWECTTARASHENLQGY---PSDNTASAANKKIEVMLNGLTALKE 346
Q Y A + + Y W TTA + L G+ +D+T N E+ + T L +
Sbjct: 297 QSYSACTTDGRSDGYRWCATTANYDRDKLFGFCPTRADSTVMGGNSAGELCVFPFTFLGK 356
Query: 345 QYSHC 331
+YS C
Sbjct: 357 EYSTC 361
>AF538844-1|AAM97934.1| 707|Homo sapiens matrix metalloproteinase 9
(gelatinase B, 92kD gelatinase, 92kD type IV collage
protein.
Length = 707
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = -2
Query: 516 QHYLASSCHTLAASYLWECTTARASHENLQGY---PSDNTASAANKKIEVMLNGLTALKE 346
Q Y A + + Y W TTA + L G+ +D+T N E+ + T L +
Sbjct: 297 QSYSACTTDGRSDGYRWCATTANYDRDKLFGFCPTRADSTVMGGNSAGELCVFPFTFLGK 356
Query: 345 QYSHC 331
+YS C
Sbjct: 357 EYSTC 361
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,849,015
Number of Sequences: 237096
Number of extensions: 1704862
Number of successful extensions: 3370
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3370
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -