Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0858
(369 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86; Eukary... 100 1e-20
UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42; Eutele... 79 2e-14
UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3; ... 70 2e-11
UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8; Trypano... 60 1e-08
UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7; Dikar... 59 2e-08
UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba h... 54 1e-06
UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1; ... 52 3e-06
UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor; ... 48 7e-05
UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato... 46 3e-04
UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4; Apicomp... 44 7e-04
UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148, w... 43 0.002
UniRef50_Q894R7 Cluster: Putative uncharacterized protein; n=2; ... 36 0.18
UniRef50_UPI0000DA42B8 Cluster: PREDICTED: similar to 40S riboso... 35 0.41
UniRef50_A7D3C9 Cluster: Putative uncharacterized protein; n=1; ... 35 0.41
UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S riboso... 34 0.95
UniRef50_Q9Z8R8 Cluster: SuA5 Superfamily-related Protein; n=2; ... 33 2.2
UniRef50_Q0INA0 Cluster: Os12g0489400 protein; n=1; Oryza sativa... 33 2.2
UniRef50_Q96387 Cluster: Receptor-like protein kinase precursor;... 32 2.9
UniRef50_Q0DBZ5 Cluster: Os06g0504100 protein; n=3; Oryza sativa... 32 3.8
UniRef50_A3LS16 Cluster: Predicted protein; n=2; Saccharomycetac... 32 3.8
UniRef50_A4M6S9 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_A3BE21 Cluster: Putative uncharacterized protein; n=3; ... 31 5.1
UniRef50_Q8NIW5 Cluster: Putative uncharacterized protein 94C8.0... 31 5.1
UniRef50_P74528 Cluster: UDP-N-acetylmuramate--L-alanine ligase;... 31 5.1
UniRef50_Q98RQ8 Cluster: 40S ribosomal protein S25; n=1; Guillar... 31 6.7
UniRef50_P41653 Cluster: Protein ycf2; n=5; Pinus|Rep: Protein y... 31 6.7
UniRef50_Q4RQQ9 Cluster: Chromosome 2 SCAF15004, whole genome sh... 31 8.9
UniRef50_Q0LE82 Cluster: Sigma-70 region 2; n=1; Herpetosiphon a... 31 8.9
UniRef50_A6WEL2 Cluster: Type II secretion system protein precur... 31 8.9
UniRef50_Q5ZEA5 Cluster: Putative uncharacterized protein P0006C... 31 8.9
UniRef50_Q5ZQV9 Cluster: Putative uncharacterized protein; n=3; ... 31 8.9
UniRef50_Q54UG9 Cluster: C2H2 type Zn finger-containing protein;... 31 8.9
UniRef50_A2BLT6 Cluster: 30S ribosomal protein S25e; n=1; Hypert... 31 8.9
UniRef50_P78854 Cluster: Lysophospholipase 1 precursor; n=1; Sch... 31 8.9
>UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86;
Eukaryota|Rep: 40S ribosomal protein S25 - Drosophila
melanogaster (Fruit fly)
Length = 117
Score = 100 bits (239), Expect = 1e-20
Identities = 53/89 (59%), Positives = 58/89 (65%)
Frame = +3
Query: 3 KDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKEVPQY 182
KDAK+SAKQPQ LNNQVLFDK TYEKLYKEVP Y
Sbjct: 5 KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 64
Query: 183 KLITPAVVSERLKVRGSLARRALINLGKK 269
KLITP+VVSERLK+RGSLA+RALI L +K
Sbjct: 65 KLITPSVVSERLKIRGSLAKRALIELREK 93
Score = 57.2 bits (132), Expect = 9e-08
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2
Query: 254 QLREKGLIKQVVQHHGQVIYTRATKGDD 337
+LREKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 89 ELREKGLIKQVVQHHSQVIYTRATKGDE 116
>UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42;
Euteleostomi|Rep: 40S ribosomal protein S25 - Homo
sapiens (Human)
Length = 125
Score = 79.4 bits (187), Expect = 2e-14
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = +3
Query: 117 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINLGKK 269
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL L K
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSK 94
Score = 39.1 bits (87), Expect = 0.025
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 254 QLREKGLIKQVVQHHGQVIYTRATKGDDPVA 346
+L KGLIK V +H QVIYTR TKG D A
Sbjct: 90 ELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
>UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 234
Score = 69.7 bits (163), Expect = 2e-11
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = +3
Query: 117 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINL 260
+NN VLFD+ TY+KL EVP+YK ITP+V+SERL++ GSLARRA+ +L
Sbjct: 163 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDL 210
>UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8;
Trypanosomatidae|Rep: 40S ribosomal protein S25 -
Leishmania infantum
Length = 120
Score = 60.5 bits (140), Expect = 1e-08
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = +3
Query: 117 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINL 260
L N V+FDK TY+KL EVP+YKLITP+++S+RLK+ S+A L L
Sbjct: 36 LQNAVMFDKETYDKLRSEVPKYKLITPSIISDRLKIAVSIAAAGLKQL 83
>UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7;
Dikarya|Rep: Ribosomal protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 107
Score = 59.3 bits (137), Expect = 2e-08
Identities = 26/50 (52%), Positives = 38/50 (76%)
Frame = +3
Query: 120 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINLGKK 269
NN V+ DK Y+++ KEVP YKLI+ +V+ +R+K+ GSLARRA+ L K+
Sbjct: 37 NNAVIVDKAVYDRIIKEVPTYKLISQSVLIDRMKINGSLARRAIAFLEKE 86
Score = 38.7 bits (86), Expect = 0.033
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +2
Query: 257 LREKGLIKQVVQHHGQVIYTRAT 325
L ++GLIK+VV HH Q+IYTRAT
Sbjct: 83 LEKEGLIKRVVHHHAQLIYTRAT 105
>UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba
histolytica|Rep: Ribosomal protein S25 - Entamoeba
histolytica
Length = 129
Score = 53.6 bits (123), Expect = 1e-06
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +3
Query: 117 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINLGKK 269
LNN V+FDK T +K K+VP K+ITP VV++R+ + G+L + L L KK
Sbjct: 39 LNNTVIFDKATLDKCAKDVPSMKVITPPVVADRITITGALGKILLKALDKK 89
>UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1;
Babesia bovis|Rep: Ribosomal protein S25 , putative -
Babesia bovis
Length = 104
Score = 52.0 bits (119), Expect = 3e-06
Identities = 22/47 (46%), Positives = 35/47 (74%)
Frame = +3
Query: 120 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINL 260
N+ V FDK TY+KL ++P+ +LIT + + ++LKV S+AR+AL +L
Sbjct: 36 NHAVFFDKATYDKLMSDIPKARLITISTIVDKLKVNASMARKALAHL 82
>UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor;
n=24; Eukaryota|Rep: 40S ribosomal protein S25-A
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 108
Score = 47.6 bits (108), Expect = 7e-05
Identities = 21/47 (44%), Positives = 35/47 (74%)
Frame = +3
Query: 129 VLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINLGKK 269
V+ D+ Y+++ KEVP Y+ ++ +V+ +RLK+ GSLAR AL +L K+
Sbjct: 40 VILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKE 86
>UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato
sp|P46301|RS25_LYCES 40S ribosomal protein S25 p; n=1;
Ostreococcus tauri|Rep: Ribosomal protein S25,
cytosolic-tomato sp|P46301|RS25_LYCES 40S ribosomal
protein S25 p - Ostreococcus tauri
Length = 82
Score = 45.6 bits (103), Expect = 3e-04
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +3
Query: 147 TYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINLGKK 269
TY+KL EVP+YK+IT AV+ +RL++ SLAR+ + L K
Sbjct: 20 TYDKLLAEVPKYKMITTAVLCDRLRITCSLARKGIAILQAK 60
>UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4;
Apicomplexa|Rep: 40S ribosomal protein S25 -
Cryptosporidium parvum Iowa II
Length = 106
Score = 44.4 bits (100), Expect = 7e-04
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +3
Query: 120 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRAL 251
N+ VLFDK T ++ + +V + +L+TPAVV +LKV S AR L
Sbjct: 38 NHSVLFDKKTADRFHSDVLKSRLLTPAVVVNQLKVNASAARAML 81
>UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_148,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 204
Score = 43.2 bits (97), Expect = 0.002
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +3
Query: 117 LNNQVLFDKPTYEKLYKEVPQY-KLITPAVVSERLKVRGSLARRALINLGK 266
LNN V D +Y+++ ++P+ LIT + VS++ KV GSLARR + + K
Sbjct: 103 LNNAVFLDNTSYKQIETQLPKMGALITVSTVSDKFKVNGSLARRCIRHFAK 153
>UniRef50_Q894R7 Cluster: Putative uncharacterized protein; n=2;
Clostridium|Rep: Putative uncharacterized protein -
Clostridium tetani
Length = 579
Score = 36.3 bits (80), Expect = 0.18
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -3
Query: 283 LFDETFFPKLMSALLAREPRTFNLSDTTAGVISLYCGTSLYSFSYVGLSNNTW 125
L D FF K +S + N++D T L +L+++ Y G+ NNTW
Sbjct: 351 LIDNVFFYKFLSGNFFTKAEDLNINDATLKRSILLSRDTLFTWFYKGVDNNTW 403
>UniRef50_UPI0000DA42B8 Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Rattus norvegicus
Length = 93
Score = 35.1 bits (77), Expect = 0.41
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +2
Query: 161 VQGSPTVQANHTCCRI*KVKGPRFPGEKSTHQLREKGLIKQVVQHHGQVIYTRATKGDDP 340
V+ SPT+ + +C + + R + +L +GL K V +H QV+ TR TKG D
Sbjct: 28 VRKSPTIVCDSSC-GLQETGDSRVHAGAAPRELLSEGLSKLVSKHRAQVVDTRNTKGGDA 86
Query: 341 VA 346
A
Sbjct: 87 PA 88
>UniRef50_A7D3C9 Cluster: Putative uncharacterized protein; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: Putative
uncharacterized protein - Halorubrum lacusprofundi ATCC
49239
Length = 330
Score = 35.1 bits (77), Expect = 0.41
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 10 RRLRPNSLKKHRRRRKDPVAAKPRRR 87
RR RP L+ RRRR+D V A+PR R
Sbjct: 93 RRARPRQLRPDRRRRRDAVGARPRPR 118
>UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=4; Euarchontoglires|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Homo sapiens
Length = 102
Score = 33.9 bits (74), Expect = 0.95
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 254 QLREKGLIKQVVQHHGQVIYTRATKGDD 337
+L KGLIK V +H +VIYTR TK D
Sbjct: 67 ELLGKGLIKLVSKHRARVIYTRNTKSGD 94
>UniRef50_Q9Z8R8 Cluster: SuA5 Superfamily-related Protein; n=2;
Chlamydophila pneumoniae|Rep: SuA5 Superfamily-related
Protein - Chlamydia pneumoniae (Chlamydophila
pneumoniae)
Length = 286
Score = 32.7 bits (71), Expect = 2.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 212 KVKGPRFPGEKSTHQLREKGLIKQVVQHHGQVIYTRATKGDDPVA*T 352
K + PRFP E ++ + +++++V H G +I T A + P A T
Sbjct: 98 KHRNPRFPKETLAFRIVDHSVVREIVDHCGTLIGTSANLSEFPSALT 144
>UniRef50_Q0INA0 Cluster: Os12g0489400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0489400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 95
Score = 32.7 bits (71), Expect = 2.2
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 111 HELFLWTTSSSWLCRHRILPSSSVFFEAVW 22
H LF W++S S+ RHR LP +AVW
Sbjct: 47 HPLFRWSSSLSFARRHRFLPLVHSLRQAVW 76
>UniRef50_Q96387 Cluster: Receptor-like protein kinase precursor;
n=1; Catharanthus roseus|Rep: Receptor-like protein
kinase precursor - Catharanthus roseus (Rosy periwinkle)
(Madagascar periwinkle)
Length = 803
Score = 32.3 bits (70), Expect = 2.9
Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = -3
Query: 196 GVISLY-CGTSLYS-FSYVGLSNNTWLFNLSRTFPLD---HFFFLALPPPDPSFFFCVF 35
G S+Y GT L+S F N TWLFN+ F HF L P P+ +FFF VF
Sbjct: 258 GPSSVYGTGTKLHSVFDPNTQINATWLFNVDSGFGYFIRFHFCNLLNPIPNNNFFFNVF 316
>UniRef50_Q0DBZ5 Cluster: Os06g0504100 protein; n=3; Oryza
sativa|Rep: Os06g0504100 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 31.9 bits (69), Expect = 3.8
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 4 RTRRLRPNSLKKHRRRRKDPVAAKPRRRSGPKEK 105
R +RLR S HRRRR+ P+ PRRR P+ +
Sbjct: 149 RRQRLRLRST--HRRRRRPPLRPAPRRRRRPRPR 180
>UniRef50_A3LS16 Cluster: Predicted protein; n=2;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 540
Score = 31.9 bits (69), Expect = 3.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 220 FNLSDTTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPLDHFFFL-ALP 68
FNL+ G+ ++ G+S +F+ +G+ + W F + P+D FL ALP
Sbjct: 145 FNLTFLITGIFAVVAGSSP-TFAAIGVFDAFWSFGVGGNLPVDSAIFLEALP 195
>UniRef50_A4M6S9 Cluster: Putative uncharacterized protein; n=1;
Petrotoga mobilis SJ95|Rep: Putative uncharacterized
protein - Petrotoga mobilis SJ95
Length = 321
Score = 31.5 bits (68), Expect = 5.1
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = -3
Query: 310 DHLPMVLDYLFDETFFPKLMSALLAREPRTFNLSDTTAGVISLYCGTSLYSFSYVGLSNN 131
+HL V+D L D FP + R+PRT+ S ++ V LY S FS++G+S
Sbjct: 122 NHLHGVIDLLGD--VFPNSKVVFIIRDPRTWIRSAISSPVYLLY---SKVDFSFLGMSMR 176
Query: 130 TWLF 119
+ F
Sbjct: 177 AFHF 180
>UniRef50_A3BE21 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 614
Score = 31.5 bits (68), Expect = 5.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 10 RRLRPNSLKKHRRRRKDPVAAKPRR 84
R +RP+ ++ R+RR DPV +PRR
Sbjct: 463 RDVRPDGRRRQRQRRADPVRPRPRR 487
>UniRef50_Q8NIW5 Cluster: Putative uncharacterized protein 94C8.080;
n=1; Neurospora crassa|Rep: Putative uncharacterized
protein 94C8.080 - Neurospora crassa
Length = 1565
Score = 31.5 bits (68), Expect = 5.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 145 GLSNNTWLFNLSRTFPLDHFFFLALPPPDPS 53
GL N+ W F + T+P FF L+ PP P+
Sbjct: 1290 GLGNDDWSFYAAETYPAATFFNLSPRPPRPA 1320
>UniRef50_P74528 Cluster: UDP-N-acetylmuramate--L-alanine ligase;
n=10; Cyanobacteria|Rep: UDP-N-acetylmuramate--L-alanine
ligase - Synechocystis sp. (strain PCC 6803)
Length = 505
Score = 31.5 bits (68), Expect = 5.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 236 GEKSTHQLREKGLIKQVVQHHGQVIY 313
GE++ + +R + L K V QHHG V+Y
Sbjct: 439 GEQNPYNIRGEDLAKAVGQHHGHVVY 464
>UniRef50_Q98RQ8 Cluster: 40S ribosomal protein S25; n=1; Guillardia
theta|Rep: 40S ribosomal protein S25 - Guillardia theta
(Cryptomonas phi)
Length = 87
Score = 31.1 bits (67), Expect = 6.7
Identities = 12/47 (25%), Positives = 29/47 (61%)
Frame = +3
Query: 120 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINL 260
NNQ+ +K Y+K+ E+ + K ++ +S + +++ SL ++ + +L
Sbjct: 19 NNQIYIEKSLYQKIIDELNKEKFVSFTSLSSKYRIKISLIKKIINHL 65
>UniRef50_P41653 Cluster: Protein ycf2; n=5; Pinus|Rep: Protein ycf2
- Pinus thunbergii (Green pine) (Japanese black pine)
Length = 2054
Score = 31.1 bits (67), Expect = 6.7
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = -3
Query: 268 FFPKLMSALLAREPRTFNLSDTTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPLDH 89
F P+++S LL R+ R N G++ L +Y F++ + F + FP+ +
Sbjct: 48 FDPRILSTLLLRDLRKSNPYFLVKGIVVLTLSILIYRFNHQSSMIDRKNFYSIKLFPIHN 107
Query: 88 FFFLALPPPD 59
F L P+
Sbjct: 108 FMELGNETPE 117
>UniRef50_Q4RQQ9 Cluster: Chromosome 2 SCAF15004, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 2
SCAF15004, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 779
Score = 30.7 bits (66), Expect = 8.9
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 19 RPNSLKKHRRRRKDPVAAKPRR-RSGPKEK 105
RP K +RRK P++ PRR R+ PK K
Sbjct: 252 RPRRKSKSPKRRKSPLSVSPRRNRASPKRK 281
>UniRef50_Q0LE82 Cluster: Sigma-70 region 2; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Sigma-70 region 2 -
Herpetosiphon aurantiacus ATCC 23779
Length = 182
Score = 30.7 bits (66), Expect = 8.9
Identities = 26/91 (28%), Positives = 40/91 (43%)
Frame = -3
Query: 361 LYHSLCDWIIALGRTRVDHLPMVLDYLFDETFFPKLMSALLAREPRTFNLSDTTAGVISL 182
++ SL D I DH VL +L+ E++ P L + R D A V +
Sbjct: 1 MFESLSDQEIIERAKAYDHA--VLQFLY-ESYSPALFRYIYYRIGDRETAEDIRADVF-I 56
Query: 181 YCGTSLYSFSYVGLSNNTWLFNLSRTFPLDH 89
L SF+Y G S +WL+ ++ +DH
Sbjct: 57 KMLEGLASFNYQGWSIASWLYRIAHDRVVDH 87
>UniRef50_A6WEL2 Cluster: Type II secretion system protein
precursor; n=1; Kineococcus radiotolerans SRS30216|Rep:
Type II secretion system protein precursor - Kineococcus
radiotolerans SRS30216
Length = 286
Score = 30.7 bits (66), Expect = 8.9
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 262 PKLMSALLAREPRTFNLSDTTAGVISLYCGTSLYSFSYVGLS 137
P ++ ALLA P T DT AGV+ L G + + SY +S
Sbjct: 232 PWVVLALLATRPGTLEAFDTGAGVVVLGAGAVVSAGSYAVMS 273
>UniRef50_Q5ZEA5 Cluster: Putative uncharacterized protein
P0006C01.13; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0006C01.13 - Oryza sativa subsp. japonica (Rice)
Length = 117
Score = 30.7 bits (66), Expect = 8.9
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 1 GRTRRLRPNSLKKHRRRRKDPVAAKPRRR 87
GR RR RP ++HR+RR+ ++ P RR
Sbjct: 4 GRWRRSRPPPPRRHRQRRRSRLSPPPPRR 32
>UniRef50_Q5ZQV9 Cluster: Putative uncharacterized protein; n=3;
Siphoviridae|Rep: Putative uncharacterized protein -
Pseudomonas phage B3
Length = 736
Score = 30.7 bits (66), Expect = 8.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 223 TFNLSDTTAGVISLYCGTSLYSFSYVGLSNNTWLFNL 113
+ +L T +S+Y GTSL SY GL+ TW + L
Sbjct: 650 SISLEAGTTYTLSIYSGTSLKK-SYTGLTGTTWTYPL 685
>UniRef50_Q54UG9 Cluster: C2H2 type Zn finger-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: C2H2 type Zn
finger-containing protein - Dictyostelium discoideum AX4
Length = 576
Score = 30.7 bits (66), Expect = 8.9
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +1
Query: 22 PNSLKKHRRRRKDPVAAKPRRRSGPKEKFVT 114
P+ LKKH R+ D VA G KEKFVT
Sbjct: 256 PSYLKKHAARKHDGVATNICMFPGCKEKFVT 286
>UniRef50_A2BLT6 Cluster: 30S ribosomal protein S25e; n=1;
Hyperthermus butylicus DSM 5456|Rep: 30S ribosomal
protein S25e - Hyperthermus butylicus (strain DSM 5456 /
JCM 9403)
Length = 76
Score = 30.7 bits (66), Expect = 8.9
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +3
Query: 150 YEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINLGKK 269
Y+++ +EV + +TP +++E+ + SLAR+ L L K+
Sbjct: 18 YKRIAREVKRESFVTPYMLAEKYNMTISLARQVLKRLAKE 57
>UniRef50_P78854 Cluster: Lysophospholipase 1 precursor; n=1;
Schizosaccharomyces pombe|Rep: Lysophospholipase 1
precursor - Schizosaccharomyces pombe (Fission yeast)
Length = 613
Score = 30.7 bits (66), Expect = 8.9
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = -3
Query: 283 LFDETFFPKLMSALLAREPRTFN--LSDTTAGVISLYCGTSLYSFSYVGLSNNT---WLF 119
+F+ F+ +M+ + + FN LSD VIS G + Y F V LS+ T W
Sbjct: 198 VFNAHFYSSIMNEVAEKANAGFNISLSDYWGRVISRTLGDTTYGFPNVSLSSITSQEWYR 257
Query: 118 NLSRTFPLDHF 86
N + +P+ F
Sbjct: 258 NANFPYPIITF 268
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,535,737
Number of Sequences: 1657284
Number of extensions: 7878822
Number of successful extensions: 25828
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 24783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25749
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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