BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0858 (369 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC3D6.15 |rps2501|rps25-1|40S ribosomal protein S25|Schizosacc... 45 3e-06 SPAC694.05c |rps2502|rps25-2, rps25|40S ribosomal protein S25|Sc... 45 3e-06 SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 31 0.075 SPAC821.05 |||translation initiation factor eIF3h|Schizosaccharo... 29 0.30 SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 28 0.40 SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 0.70 SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 27 0.93 SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 25 3.7 SPAC2G11.13 |atg22||autophagy associated protein Atg22 |Schizosa... 25 3.7 SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 25 3.7 SPBC28F2.07 |sfr1|dds20, mug13|Swi five-dependent recombination ... 25 4.9 SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 24 6.5 SPAC23H4.16c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 6.5 SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 24 6.5 SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 24 8.6 >SPBC3D6.15 |rps2501|rps25-1|40S ribosomal protein S25|Schizosaccharomyces pombe|chr 2|||Manual Length = 88 Score = 45.2 bits (102), Expect = 3e-06 Identities = 19/46 (41%), Positives = 34/46 (73%) Frame = +3 Query: 132 LFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINLGKK 269 +FDK +++ KEVP +K I+ +V+ +R+K+ GSLAR A+ +L ++ Sbjct: 21 VFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAER 66 Score = 29.9 bits (64), Expect = 0.13 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +2 Query: 257 LREKGLIKQVVQHHGQVIYTRA 322 L E+G+I++V QH Q IYTRA Sbjct: 63 LAERGVIQKVDQHSKQAIYTRA 84 >SPAC694.05c |rps2502|rps25-2, rps25|40S ribosomal protein S25|Schizosaccharomyces pombe|chr 1|||Manual Length = 89 Score = 45.2 bits (102), Expect = 3e-06 Identities = 19/46 (41%), Positives = 34/46 (73%) Frame = +3 Query: 132 LFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINLGKK 269 +FDK +++ KEVP +K I+ +V+ +R+K+ GSLAR A+ +L ++ Sbjct: 21 VFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAER 66 Score = 28.3 bits (60), Expect = 0.40 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = +2 Query: 257 LREKGLIKQVVQHHGQVIYTR 319 L E+G+I++V QH Q IYTR Sbjct: 63 LAERGVIQKVDQHSKQAIYTR 83 >SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces pombe|chr 1|||Manual Length = 613 Score = 30.7 bits (66), Expect = 0.075 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 5/71 (7%) Frame = -3 Query: 283 LFDETFFPKLMSALLAREPRTFN--LSDTTAGVISLYCGTSLYSFSYVGLSNNT---WLF 119 +F+ F+ +M+ + + FN LSD VIS G + Y F V LS+ T W Sbjct: 198 VFNAHFYSSIMNEVAEKANAGFNISLSDYWGRVISRTLGDTTYGFPNVSLSSITSQEWYR 257 Query: 118 NLSRTFPLDHF 86 N + +P+ F Sbjct: 258 NANFPYPIITF 268 >SPAC821.05 |||translation initiation factor eIF3h|Schizosaccharomyces pombe|chr 1|||Manual Length = 357 Score = 28.7 bits (61), Expect = 0.30 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = -1 Query: 153 HMWVYQTTPGCSTCHELFLWTTSSSWLCRHRILPSSSV 40 +M YQ TP HE WT SS L H + PS+ + Sbjct: 152 YMRAYQLTPEFMAAHEEKTWTASS--LNSHNLTPSNVI 187 >SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 554 Score = 28.3 bits (60), Expect = 0.40 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = -3 Query: 220 FNLSDTTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPLDHFFFL-ALP 68 FNL+ GV ++ G S +F+ + + + W F + P+D FL ALP Sbjct: 151 FNLTFLFTGVFAVIAGASP-NFASICVFDALWSFGVGGNLPVDSAIFLEALP 201 >SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|Schizosaccharomyces pombe|chr 1|||Manual Length = 2397 Score = 27.5 bits (58), Expect = 0.70 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -3 Query: 160 SFSYVGLSNNTWLFNLSRTFPLDHFFFLALPPP 62 SF Y L NN++L +S + ++ F++ PPP Sbjct: 1008 SFIYGSLQNNSFLSRVSPSSLEENVFYIQHPPP 1040 >SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Phf2|Schizosaccharomyces pombe|chr 1|||Manual Length = 538 Score = 27.1 bits (57), Expect = 0.93 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = +1 Query: 34 KKHRRRRKDPVAAKPRRRSGPKEKFVTS*TTRC 132 K HR DP+ P RR GP + V + +C Sbjct: 203 KVHRPNHFDPLVKLPTRRRGPGRRPVVALAMKC 235 >SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces pombe|chr 2|||Manual Length = 150 Score = 25.0 bits (52), Expect = 3.7 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = -3 Query: 193 VISLYCGTSLYSFSYV-GLSNNTWLFNLSRTFPLDHFFFLALPPP 62 V+ + C +L F ++ G+ N T P +F+ L PPP Sbjct: 37 VVVIICIAALIFFFFIIGIINRRRTKKGQATIPFTNFYPLTAPPP 81 >SPAC2G11.13 |atg22||autophagy associated protein Atg22 |Schizosaccharomyces pombe|chr 1|||Manual Length = 529 Score = 25.0 bits (52), Expect = 3.7 Identities = 9/29 (31%), Positives = 16/29 (55%) Frame = -1 Query: 354 IVYATGSSPLVARV*ITCPWCWTTCLMRP 268 I+Y T ++P++ + +T CW L P Sbjct: 260 ILYKTNNNPIILPITVTVCSCWWLILSTP 288 >SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|chr 3|||Manual Length = 687 Score = 25.0 bits (52), Expect = 3.7 Identities = 12/39 (30%), Positives = 23/39 (58%) Frame = -3 Query: 355 HSLCDWIIALGRTRVDHLPMVLDYLFDETFFPKLMSALL 239 +S C +++AL TRV +++ FD PK++ A++ Sbjct: 522 NSFCVFLVAL--TRVVSFALLIPIAFDLAIIPKVIIAII 558 >SPBC28F2.07 |sfr1|dds20, mug13|Swi five-dependent recombination repair protein Sfr1|Schizosaccharomyces pombe|chr 2|||Manual Length = 299 Score = 24.6 bits (51), Expect = 4.9 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = +1 Query: 13 RLRPNSLKKHRRRRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPHMRN 159 R PNS+K+ +R K P++ +S P+ +T +R + +RN Sbjct: 150 RTTPNSIKRQKRLFKSPISNCLNPKSDPE---ITQLLSRRLKLEKEVRN 195 >SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual Length = 503 Score = 24.2 bits (50), Expect = 6.5 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -3 Query: 139 SNNTWLFNLSRTFPLDHFFFLAL 71 S N+W+F L TF F+L+L Sbjct: 316 SRNSWIFTLLLTFTQLTIFYLSL 338 >SPAC23H4.16c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 328 Score = 24.2 bits (50), Expect = 6.5 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = -1 Query: 81 SWLCRHRILPSSSVFFEAVW 22 +WL + ++PSSS F + W Sbjct: 131 AWLEKQELVPSSSNFLNSFW 150 >SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Schizosaccharomyces pombe|chr 1|||Manual Length = 507 Score = 24.2 bits (50), Expect = 6.5 Identities = 11/39 (28%), Positives = 20/39 (51%) Frame = -3 Query: 325 GRTRVDHLPMVLDYLFDETFFPKLMSALLAREPRTFNLS 209 G TR+D L + +Y+ E PK L ++ + + +S Sbjct: 139 GNTRLDLLNQLSEYISPEILLPKRRLEHLLQQAKDYQVS 177 >SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces pombe|chr 3|||Manual Length = 245 Score = 23.8 bits (49), Expect = 8.6 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = +3 Query: 147 TYEKLYKEVPQYKLITPAVVS 209 TY+K+Y E P K++ + S Sbjct: 96 TYKKIYNEYPPTKILVQEIAS 116 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,580,156 Number of Sequences: 5004 Number of extensions: 32268 Number of successful extensions: 141 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 141 length of database: 2,362,478 effective HSP length: 65 effective length of database: 2,037,218 effective search space used: 116121426 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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