Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0858
(369 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0339 - 22400534-22400647,22401264-22401398,22401491-224015... 70 7e-13
08_02_1576 + 27965862-27965864,27965952-27966026,27966113-279662... 70 7e-13
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249... 56 1e-08
03_05_0586 - 25875703-25876332,25876426-25876713,25877064-258771... 31 0.28
10_01_0146 - 1719997-1720386,1721498-1721515 29 0.86
12_02_0219 + 15822050-15824896 28 2.0
06_03_1117 + 27750291-27750338,27751360-27751812,27751987-277521... 27 3.5
04_03_0916 + 20794240-20794246,20794585-20796545 27 3.5
01_06_0968 + 33466574-33466607,33467087-33467115,33467438-334675... 27 3.5
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502... 27 4.6
03_05_0742 + 27310404-27310457,27311281-27311286,27311350-273114... 27 4.6
12_02_1263 + 27423411-27423464,27423985-27424104,27424200-274242... 27 6.1
04_04_1699 + 35462160-35462555,35463114-35463196,35463317-354633... 27 6.1
02_03_0349 + 18010414-18014283 27 6.1
11_06_0621 + 25587476-25587604,25588230-25588423,25588800-255888... 26 8.1
10_08_1023 - 22341815-22342042,22342179-22342247,22342717-223428... 26 8.1
08_02_1171 + 24880363-24881355,24882553-24882702,24883505-248842... 26 8.1
05_01_0049 - 337132-337488,337613-337765,337924-338551,338617-33... 26 8.1
04_04_0176 - 23329589-23331043 26 8.1
02_05_0114 + 25958834-25961296 26 8.1
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 26 8.1
>09_06_0339 -
22400534-22400647,22401264-22401398,22401491-22401565,
22401646-22401648
Length = 108
Score = 69.7 bits (163), Expect = 7e-13
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = +3
Query: 117 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINL 260
+NN VLFD+ TY+KL EVP+YK ITP+V+SERL++ GSLARRA+ +L
Sbjct: 37 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAMKDL 84
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 242 KSTHQLREKGLIKQVVQHHGQVIYTRAT 325
++ L ++GLI+ V H Q IYTRAT
Sbjct: 79 RAMKDLMDRGLIRMVSVHCSQQIYTRAT 106
>08_02_1576 +
27965862-27965864,27965952-27966026,27966113-27966247,
27967080-27967193
Length = 108
Score = 69.7 bits (163), Expect = 7e-13
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = +3
Query: 117 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINL 260
+NN VLFD+ TY+KL EVP+YK ITP+V+SERL++ GSLARRA+ +L
Sbjct: 37 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDL 84
Score = 29.5 bits (63), Expect = 0.86
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 242 KSTHQLREKGLIKQVVQHHGQVIYTRAT 325
++ + L +GLI+ V H Q IYTRAT
Sbjct: 79 RAINDLMTRGLIRMVSVHSSQQIYTRAT 106
>11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,
2496476-2496577,2496853-2497003,2497173-2497222,
2497432-2497557,2497761-2497863,2498104-2498204,
2498540-2498677,2498768-2498911,2499028-2499103,
2499224-2499309,2499432-2499560,2500572-2500674,
2500776-2500843,2500912-2501013,2501432-2501527,
2501723-2501848,2502152-2502254,2502427-2502569,
2503017-2503154,2503248-2503391,2503535-2503610,
2503883-2503968,2504135-2504212,2505180-2505254,
2505362-2505496,2506240-2506272,2507886-2507905,
2508570-2508666,2508899-2509000,2510612-2510725
Length = 1126
Score = 55.6 bits (128), Expect = 1e-08
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +3
Query: 117 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLK 221
+NN VLFDK TY+KL EVP+YK ITP+V+SERL+
Sbjct: 971 VNNSVLFDKATYDKLLSEVPKYKQITPSVLSERLR 1005
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 257 LREKGLIKQVVQHHGQVIYTRAT 325
L +G I+ V H Q+IYTRAT
Sbjct: 1102 LESRGAIRVVSVHSSQLIYTRAT 1124
>03_05_0586 -
25875703-25876332,25876426-25876713,25877064-25877194,
25877299-25877812
Length = 520
Score = 31.1 bits (67), Expect = 0.28
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 8 REGFGQTASKNTEEEGRIRWRQSQEEEVVQRKSS*QVEQPGV 133
R G G + + E G+ +WR+ +EEE Q+K + E+ V
Sbjct: 345 RGGRGGESEERRRERGKGKWREEEEEEEEQQKGQEEEEEEQV 386
>10_01_0146 - 1719997-1720386,1721498-1721515
Length = 135
Score = 29.5 bits (63), Expect = 0.86
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 4 RTRRLRPNSLKKHRRRRKDPVAAKPRRRS 90
R ++P+ + RRRR +P +PRRR+
Sbjct: 77 RAAEMQPDDGGQRRRRRSEPATTQPRRRA 105
>12_02_0219 + 15822050-15824896
Length = 948
Score = 28.3 bits (60), Expect = 2.0
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = -3
Query: 334 IALGRTRVDHLPMVLDYL---FD-ETFFPKLMSALLAREPRTFNLSDTTA-GVISLYCGT 170
+ L T D + + YL FD E KL+ L +EP T N+ DTT +I +Y G+
Sbjct: 196 LPLNATVHDRIQSSIGYLGGVFDIEGHVDKLLEKLAGKEPMTVNIYDTTGESMIRMY-GS 254
Query: 169 SLYSFS 152
S S S
Sbjct: 255 SNESAS 260
>06_03_1117 +
27750291-27750338,27751360-27751812,27751987-27752161,
27752227-27752551,27752705-27752786,27752820-27752889,
27753341-27753420,27753514-27753750
Length = 489
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 14 GFGQTASKNTEEEGRIRWRQSQEEEVVQRKSS*QVEQPG 130
GFG S N+ +RWR + +++ Q Q ++PG
Sbjct: 427 GFGIAISANSMLVEYLRWRSRRNQQLAQTVDDGQRQEPG 465
>04_03_0916 + 20794240-20794246,20794585-20796545
Length = 655
Score = 27.5 bits (58), Expect = 3.5
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 207 IRQQV*LACTVGLPCTVSH-MWVYQTTPGCSTCHELFLWTTSSSWLCRHRI 58
I Q + L +G C + VY+ P S H+LF T+ +W R+ I
Sbjct: 399 IIQHINLVKLIGFCCEGGRRLLVYEHMPNRSLDHQLFQTNTTLTWNIRYEI 449
>01_06_0968 +
33466574-33466607,33467087-33467115,33467438-33467595,
33468319-33468436,33468520-33468708,33469008-33469343,
33469468-33469569,33469696-33469890,33469993-33470155,
33470314-33470579,33470670-33470765,33470860-33471255,
33471403-33471501
Length = 726
Score = 27.5 bits (58), Expect = 3.5
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -3
Query: 295 VLDYLFD----ETFFPKLMSALLAREPRTFNLSDTTAGVISL 182
V+D+L D TFFP+++S + T+ SD GVI L
Sbjct: 281 VVDFLMDPYNYRTFFPEVISGAVTNRIYTWPTSDGYNGVIQL 322
>07_03_1575 -
27848977-27849095,27849254-27849302,27850270-27850287,
27850798-27851786,27852119-27852733,27852893-27852921,
27853990-27854453,27854530-27854654,27854743-27855025,
27855112-27856102,27856965-27857576,27857666-27858630
Length = 1752
Score = 27.1 bits (57), Expect = 4.6
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -3
Query: 361 LYHSLCDWIIALGRTRVDHLPMVLDY--LFDETFFPKLMSALLAREPRTFNLSDTTAGVI 188
LY C +I+ + T D L Y +FD L + L P ++++ +I
Sbjct: 516 LYFGTCGYILVVESTAEDSLDSTCHYYGIFDHH---SLFNVLRTCHPSYSSITN----MI 568
Query: 187 SLYCGTSLYSFSYVGLSNNTWLFNL 113
SL+ GT++ SF G N F++
Sbjct: 569 SLFWGTAIDSFDSNGRCENNKEFSI 593
>03_05_0742 +
27310404-27310457,27311281-27311286,27311350-27311469,
27311597-27311695,27311787-27311795,27311843-27311980,
27312084-27312218,27312308-27312517,27312592-27312798,
27312891-27313010,27313079-27313198,27313279-27313401,
27313501-27313605,27313764-27313908,27314658-27315148,
27315236-27315268,27315556-27315637,27315747-27315907,
27316021-27316206,27316294-27316476,27316573-27316751,
27317009-27317105
Length = 1000
Score = 27.1 bits (57), Expect = 4.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 220 FNLSDTTAGVISLYCGTSLYSFSYVGL--SNNTWLFNLSRTFPLDHFFFL 77
F ++ A +I++Y + S +G + WL+NL FPLD FL
Sbjct: 843 FFVAQLIATLIAVYANWAFTSIKGIGWGWAGIVWLYNLVFYFPLDIIKFL 892
>12_02_1263 +
27423411-27423464,27423985-27424104,27424200-27424298,
27424405-27424542,27424647-27424706,27424865-27425044,
27425132-27425338,27425415-27425534,27425609-27425728,
27425819-27425941,27426074-27426178,27426379-27426523,
27426967-27427131,27427228-27427466,27427553-27427585,
27427894-27427975,27428100-27428260,27428422-27428607,
27428700-27428882,27428969-27429147,27429386-27429482
Length = 931
Score = 26.6 bits (56), Expect = 6.1
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 220 FNLSDTTAGVISLYCGTSLYSFSYVGL--SNNTWLFNLSRTFPLDHFFFL 77
F ++ A +I++Y + S +G + WL+NL FPLD FL
Sbjct: 774 FLVAQLIATLIAVYADWAFTSIKGIGWGWAGIVWLYNLIFYFPLDIIKFL 823
>04_04_1699 +
35462160-35462555,35463114-35463196,35463317-35463378,
35463745-35463806,35463932-35463991,35464079-35464111,
35464196-35464261,35464349-35464393
Length = 268
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 10 RRLRPNSLKKHRRRRKDPVAAKPRRRSGP 96
R+ P KHRR R D A PR+R P
Sbjct: 31 RQRPPPGPTKHRRLRHDADAQPPRKRGHP 59
>02_03_0349 + 18010414-18014283
Length = 1289
Score = 26.6 bits (56), Expect = 6.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 141 KPTYEKLYKEVPQYKLITPAVVSERL 218
KPT E+L K +PQ K++ AV E +
Sbjct: 39 KPTRERLEKLLPQIKVVLDAVDMEHI 64
>11_06_0621 +
25587476-25587604,25588230-25588423,25588800-25588874,
25589434-25591852
Length = 938
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 180 TVGLPCTVSHMWVYQTTPGCSTCHELFLWTTSSSWLCRHRILPS 49
T PC++S M V C TC+++ S +CR ++PS
Sbjct: 264 TCATPCSLSFM-VDCLIKACITCYDVQATICLFSGICRLGVVPS 306
>10_08_1023 - 22341815-22342042,22342179-22342247,22342717-22342840,
22343193-22343317,22343815-22344276,22344357-22344700,
22345061-22345406,22345492-22345941,22346760-22347051,
22347171-22347515,22347611-22347834,22348072-22348563,
22348664-22349056,22349601-22349741,22349845-22350207,
22350494-22352683,22353298-22353360,22353434-22353535,
22353672-22354027,22354326-22354413,22354517-22354750,
22355508-22355975
Length = 2632
Score = 26.2 bits (55), Expect = 8.1
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2
Query: 248 THQLREKGLIKQVVQHHG 301
TH++R + LI+QV+QH G
Sbjct: 1455 THKMRAEHLIRQVLQHLG 1472
>08_02_1171 +
24880363-24881355,24882553-24882702,24883505-24884210,
24885012-24885404,24885759-24885805,24886088-24886111
Length = 770
Score = 26.2 bits (55), Expect = 8.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 364 NLYHSLCDWIIALGRTRVDHLP 299
NL+H++ DW A +RV LP
Sbjct: 347 NLFHTITDWYSAYVSSRVTDLP 368
>05_01_0049 -
337132-337488,337613-337765,337924-338551,338617-338852,
339563-339577
Length = 462
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -1
Query: 120 STCHELFLWTTSSSWLCRHRILPSSSVFF--EAVWPKPSRP 4
STCH++ L S WL L S + F E VW P P
Sbjct: 261 STCHKMQLPFKLSDWLSTVPTLTSLHLDFQDEMVWILPEEP 301
>04_04_0176 - 23329589-23331043
Length = 484
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 5 GREGFGQTASKNTEEEGRIRWRQSQEEEVVQR 100
GR+GF + EE GR R R +EE +R
Sbjct: 405 GRDGFDLSRKHGHEERGRYRPRVLEEEREHER 436
>02_05_0114 + 25958834-25961296
Length = 820
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 180 TVGLPCTVSHMWVYQTTPGCSTCHELFLWTTSSSWLCRHRILPS 49
T PC++S M V C TC+++ S +CR ++PS
Sbjct: 146 TCATPCSLSFM-VDCLIKACITCYDVQATICLFSGICRLGVVPS 188
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 171 VPQYKLITPAVVSERLKVRGSLARRALINLGKKVSSN 281
+P Y L A V +K+RG L + GKK+S N
Sbjct: 1840 IPHYYLTVDARVDNLIKLRGELNPLQESSGGKKISIN 1876
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,746,252
Number of Sequences: 37544
Number of extensions: 225477
Number of successful extensions: 738
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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