Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0858
(369 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41558-4|AAK39246.1| 117|Caenorhabditis elegans Ribosomal prote... 72 1e-13
AF016449-12|AAG24004.2| 365|Caenorhabditis elegans Serpentine r... 30 0.59
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 0.79
Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical p... 29 0.79
Z81509-4|CAB04152.2| 236|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical pr... 29 1.4
L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription f... 29 1.4
AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical ... 29 1.4
AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical ... 29 1.4
AC024776-7|AAK68469.1| 411|Caenorhabditis elegans Nuclear pore ... 28 2.4
AC024776-5|AAK68470.3| 1090|Caenorhabditis elegans Nuclear pore ... 28 2.4
U00048-11|AAB53833.1| 995|Caenorhabditis elegans Hypothetical p... 27 4.2
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 27 5.5
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 27 5.5
AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical... 27 5.5
U41009-8|AAA82282.2| 500|Caenorhabditis elegans Hypothetical pr... 26 7.3
AL033514-35|CAE18033.1| 106|Caenorhabditis elegans Hypothetical... 26 7.3
AF047659-14|AAV34788.1| 429|Caenorhabditis elegans Hypothetical... 26 7.3
AF047659-13|AAK82908.1| 503|Caenorhabditis elegans Hypothetical... 26 7.3
AF047659-12|AAC04427.1| 507|Caenorhabditis elegans Hypothetical... 26 7.3
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 26 9.7
U41510-1|ABP49525.1| 327|Caenorhabditis elegans Hypothetical pr... 26 9.7
AF016428-2|AAO26002.1| 316|Caenorhabditis elegans Serpentine re... 26 9.7
>U41558-4|AAK39246.1| 117|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 25 protein.
Length = 117
Score = 72.1 bits (169), Expect = 1e-13
Identities = 36/51 (70%), Positives = 40/51 (78%)
Frame = +3
Query: 117 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINLGKK 269
LNN VLFD+ TY+KLYKEV YKLITP+VVSERLKVR SLA+ L L K
Sbjct: 40 LNNMVLFDQATYDKLYKEVITYKLITPSVVSERLKVRASLAKAGLKELQAK 90
Score = 45.2 bits (102), Expect = 1e-05
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +2
Query: 254 QLREKGLIKQVVQHHGQVIYTRATKGDDPV 343
+L+ KGL+K VV HHGQV+YTRATK D +
Sbjct: 86 ELQAKGLVKCVVHHHGQVVYTRATKEADVI 115
>AF016449-12|AAG24004.2| 365|Caenorhabditis elegans Serpentine
receptor, class t protein71 protein.
Length = 365
Score = 29.9 bits (64), Expect = 0.59
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = -3
Query: 352 SLCDWIIALGRTRVDHLPMVLDYLFDETFFPKLMSALLAREPRTFNLSDTTAGVISLYCG 173
S+C ++A+ R + L+ LF F P+L +P T N +LYC
Sbjct: 118 SVCSILLAIERCVEINPHFPLEMLFLLNFQPELYEC----QPDTINNIVLVLCTSTLYCY 173
Query: 172 TSLYSFSYVGLSNNTWLFNLSR 107
S + G S ++WL+ R
Sbjct: 174 ISYHLLFNFGYSTSSWLYKSKR 195
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.5 bits (63), Expect = 0.79
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 4 RTRRLRPNSLKKHRRRRKDPVAAKPRRRSGPKEK 105
R RR S + RRR+ P AA PRRR P+ +
Sbjct: 465 RRRRSPSGSKSRSPRRRRSPAAA-PRRRQSPQRR 497
>Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical
protein C53A5.13 protein.
Length = 681
Score = 29.5 bits (63), Expect = 0.79
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 2 EGREGFGQTASKNTEEEGRIRWRQSQEEEVVQRK 103
E REG G + + RIRW+ +EE+V R+
Sbjct: 25 EDREGDGVDVIEVRNDAIRIRWKHDSDEEIVTRQ 58
>Z81509-4|CAB04152.2| 236|Caenorhabditis elegans Hypothetical
protein F21A3.6 protein.
Length = 236
Score = 29.1 bits (62), Expect = 1.0
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +3
Query: 150 YEKLYKEVPQYKLITP---AVVSERLKVRGSLARRA---LINLGKKVSSNR*SNTMGR*S 311
+ +L+ E P+YKLI P A+ L L R A L LGK + S R +G+
Sbjct: 112 FVRLFSEYPRYKLIWPQFRAIPDSSLMNAVELRRHASVYLNGLGKIIDSMRDEEALGKSM 171
Query: 312 TRV 320
+R+
Sbjct: 172 SRI 174
>Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 120 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINLGKKVSSNR*SNT 296
NN+ L + PT K + P + +ITP +R S A + G V S+ S+T
Sbjct: 368 NNRYLSEYPTSTKNGERAPGFNMITPLENIQRYNGSSSSATAVVTATGSAVVSSTPSST 426
>Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 120 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINLGKKVSSNR*SNT 296
NN+ L + PT K + P + +ITP +R S A + G V S+ S+T
Sbjct: 372 NNRYLSEYPTSTKNGERAPGFNMITPLENIQRYNGSSSSATAVVTATGSAVVSSTPSST 430
>Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 120 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINLGKKVSSNR*SNT 296
NN+ L + PT K + P + +ITP +R S A + G V S+ S+T
Sbjct: 368 NNRYLSEYPTSTKNGERAPGFNMITPLENIQRYNGSSSSATAVVTATGSAVVSSTPSST 426
>Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 120 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINLGKKVSSNR*SNT 296
NN+ L + PT K + P + +ITP +R S A + G V S+ S+T
Sbjct: 372 NNRYLSEYPTSTKNGERAPGFNMITPLENIQRYNGSSSSATAVVTATGSAVVSSTPSST 430
>L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription
factor protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 120 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINLGKKVSSNR*SNT 296
NN+ L + PT K + P + +ITP +R S A + G V S+ S+T
Sbjct: 372 NNRYLSEYPTSTKNGERAPGFNMITPLENIQRYNGSSSSATAVVTATGSAVVSSTPSST 430
>AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 120 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINLGKKVSSNR*SNT 296
NN+ L + PT K + P + +ITP +R S A + G V S+ S+T
Sbjct: 368 NNRYLSEYPTSTKNGERAPGFNMITPLENIQRYNGSSSSATAVVTATGSAVVSSTPSST 426
>AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 120 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALINLGKKVSSNR*SNT 296
NN+ L + PT K + P + +ITP +R S A + G V S+ S+T
Sbjct: 372 NNRYLSEYPTSTKNGERAPGFNMITPLENIQRYNGSSSSATAVVTATGSAVVSSTPSST 430
>AC024776-7|AAK68469.1| 411|Caenorhabditis elegans Nuclear pore
complex protein protein8, isoform a protein.
Length = 411
Score = 27.9 bits (59), Expect = 2.4
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = -3
Query: 346 CDWIIALGRTRVDHLPMVL-DYLFDETFFPKLMS--ALLAREPRTFNLSDTTAGVISLYC 176
C +++ +++ H +L + DET F + S AL A + NL TTA + LY
Sbjct: 283 CAKFLSVPISKIAHEAHILTQFGHDETSFHSITSIKALEASQSAALNLVATTAKGVRLYF 342
Query: 175 GTSLYSFSYVGLSNNT 128
S S + + NN+
Sbjct: 343 SVSTGPQSTMAMFNNS 358
>AC024776-5|AAK68470.3| 1090|Caenorhabditis elegans Nuclear pore
complex protein protein8, isoform b protein.
Length = 1090
Score = 27.9 bits (59), Expect = 2.4
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = -3
Query: 346 CDWIIALGRTRVDHLPMVL-DYLFDETFFPKLMS--ALLAREPRTFNLSDTTAGVISLYC 176
C +++ +++ H +L + DET F + S AL A + NL TTA + LY
Sbjct: 198 CAKFLSVPISKIAHEAHILTQFGHDETSFHSITSIKALEASQSAALNLVATTAKGVRLYF 257
Query: 175 GTSLYSFSYVGLSNNT 128
S S + + NN+
Sbjct: 258 SVSTGPQSTMAMFNNS 273
>U00048-11|AAB53833.1| 995|Caenorhabditis elegans Hypothetical
protein C05D11.1 protein.
Length = 995
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 123 NQVLFDKPTYEKLYKEVPQYKLITPAVVSERL-KVRGSL 236
N +LFD+ EKL++++ + + P V E+L +VR +L
Sbjct: 694 NCILFDELVLEKLHEKISKDVMKNPEAVLEKLEQVRSAL 732
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 43 RRRRKDPVAAKPRRRSGP 96
RRR+ P+ A PRRR P
Sbjct: 478 RRRQSSPMVASPRRRRSP 495
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 43 RRRRKDPVAAKPRRRSGP 96
RRR+ P+ A PRRR P
Sbjct: 478 RRRQSSPMVASPRRRRSP 495
>AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical
protein Y73B6BL.1 protein.
Length = 751
Score = 26.6 bits (56), Expect = 5.5
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 5/45 (11%)
Frame = -1
Query: 174 GLPCTVSHMWV-YQTTPGCS----TCHELFLWTTSSSWLCRHRIL 55
GL + W YQ CS TC F W W CR R++
Sbjct: 353 GLSNQYTDEWYEYQPVRHCSEQDATCDSPFYWCDMKLWRCRSRVV 397
>U41009-8|AAA82282.2| 500|Caenorhabditis elegans Hypothetical
protein C06E7.4 protein.
Length = 500
Score = 26.2 bits (55), Expect = 7.3
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = -3
Query: 244 LLAREPRTFNLSDTTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPLDHFFFLALPP 65
++ R+P ++ ++ + C S FS+V + R L F+F PP
Sbjct: 340 IIRRQP-SYGSRSSSIATSQMRCDQSEIDFSWVNEEEDKLKRESKRIDSLPEFYFGMDPP 398
Query: 64 PDPS 53
P PS
Sbjct: 399 PVPS 402
>AL033514-35|CAE18033.1| 106|Caenorhabditis elegans Hypothetical
protein Y75B8A.37 protein.
Length = 106
Score = 26.2 bits (55), Expect = 7.3
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1
Query: 45 SVFFEAVWPKPSR 7
S+FF A+WPKP R
Sbjct: 71 SLFFVAIWPKPVR 83
>AF047659-14|AAV34788.1| 429|Caenorhabditis elegans Hypothetical
protein K07H8.2c protein.
Length = 429
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 159 LYKEVPQYKLITPAVVSERLKVRGSLARR--ALINLGKKVSSNR 284
L++E+P+ ++ PA++ + + +LA R L NLG SS +
Sbjct: 42 LFEEIPEILILVPALLGLKGNLEMTLASRLSTLANLGHMDSSKQ 85
>AF047659-13|AAK82908.1| 503|Caenorhabditis elegans Hypothetical
protein K07H8.2b protein.
Length = 503
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 159 LYKEVPQYKLITPAVVSERLKVRGSLARR--ALINLGKKVSSNR 284
L++E+P+ ++ PA++ + + +LA R L NLG SS +
Sbjct: 116 LFEEIPEILILVPALLGLKGNLEMTLASRLSTLANLGHMDSSKQ 159
>AF047659-12|AAC04427.1| 507|Caenorhabditis elegans Hypothetical
protein K07H8.2a protein.
Length = 507
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 159 LYKEVPQYKLITPAVVSERLKVRGSLARR--ALINLGKKVSSNR 284
L++E+P+ ++ PA++ + + +LA R L NLG SS +
Sbjct: 120 LFEEIPEILILVPALLGLKGNLEMTLASRLSTLANLGHMDSSKQ 163
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 123 CSTCHELFLWTTSSSWLCRHRILPSSSVFFEAVWPKPSRP 4
C + F+ + C +LP+ S+ E PKP RP
Sbjct: 44 CRMQDDCFIGEICDNGFCCPNVLPTFSLQREPTSPKPKRP 83
>U41510-1|ABP49525.1| 327|Caenorhabditis elegans Hypothetical
protein ZC449.6 protein.
Length = 327
Score = 25.8 bits (54), Expect = 9.7
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +2
Query: 161 VQGSPTVQANHTCCRI*KVKGPR--FPGEKSTHQLREKGLIKQVVQHHGQVIYTRATKGD 334
V+ T+Q TC R + GP+ EK +R K L + HG+ + + G+
Sbjct: 135 VRSQSTIQFKTTCLRFRAIYGPQDVTVAEKVVQMVR-KNLFMVKISRHGRESVSNMSSGE 193
Query: 335 D 337
+
Sbjct: 194 N 194
>AF016428-2|AAO26002.1| 316|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 65 protein.
Length = 316
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 241 LAREPRTFNLSDTTAGVISLYCG 173
++ E F+LSDT ++ L+CG
Sbjct: 7 ISLENGKFDLSDTIVNIVELFCG 29
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,909,353
Number of Sequences: 27780
Number of extensions: 188971
Number of successful extensions: 632
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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