Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0852
         (288 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0387 - 2804990-2805059,2805106-2806086,2806856-2806875           28   1.4  
02_05_1032 + 33637108-33638421                                         25   7.4  

>02_01_0387 - 2804990-2805059,2805106-2806086,2806856-2806875
          Length = 356

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 189 SSCSTCKW*CTESRGRSMGRSKNRR 115
           +SC  CK  C  S GRS  R++ RR
Sbjct: 252 TSCIFCKSFCRSSGGRSRARARERR 276


>02_05_1032 + 33637108-33638421
          Length = 437

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 281 YFLFTQNITLHLTLMVVIDDTRVDMXPNLTYL 186
           YF FT+NI     + V     RVD+  + TY+
Sbjct: 289 YFSFTRNILQGKPITVYRGKNRVDLARDFTYI 320


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,107,493
Number of Sequences: 37544
Number of extensions: 58302
Number of successful extensions: 111
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 304131700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)