Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0850
(698 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001846-1|AAN71607.1| 285|Drosophila melanogaster RH55218p pro... 109 4e-24
AY061117-1|AAL28665.1| 224|Drosophila melanogaster LD10220p pro... 109 4e-24
AE014296-171|AAN11458.1| 224|Drosophila melanogaster CG9205-PB,... 109 4e-24
AE014296-170|AAF47437.1| 224|Drosophila melanogaster CG9205-PA,... 109 4e-24
AE013599-961|AAF58878.3| 779|Drosophila melanogaster CG1513-PA ... 34 0.16
AY052146-1|AAK93570.1| 1728|Drosophila melanogaster SD10541p pro... 31 2.0
AF093637-1|AAC72365.1| 1750|Drosophila melanogaster SET domain b... 31 2.0
AE014297-1382|AAF54700.3| 1993|Drosophila melanogaster CG6939-PA... 31 2.0
AE014297-1381|AAN13531.2| 1973|Drosophila melanogaster CG6939-PB... 31 2.0
X85331-1|CAA59680.1| 437|Drosophila melanogaster msh protein. 29 6.1
Z50097-2|CAB58233.1| 1080|Drosophila melanogaster headcase prote... 29 8.0
Z50097-1|CAA90425.1| 649|Drosophila melanogaster hdc protein pr... 29 8.0
AY061216-1|AAL28764.1| 192|Drosophila melanogaster LD16285p pro... 29 8.0
AM294857-1|CAL26843.1| 192|Drosophila melanogaster CG9893 protein. 29 8.0
AM294856-1|CAL26842.1| 192|Drosophila melanogaster CG9893 protein. 29 8.0
AM294855-1|CAL26841.1| 192|Drosophila melanogaster CG9893 protein. 29 8.0
AM294854-1|CAL26840.1| 192|Drosophila melanogaster CG9893 protein. 29 8.0
AM294853-1|CAL26839.1| 192|Drosophila melanogaster CG9893 protein. 29 8.0
AM294852-1|CAL26838.1| 192|Drosophila melanogaster CG9893 protein. 29 8.0
AM294851-1|CAL26837.1| 192|Drosophila melanogaster CG9893 protein. 29 8.0
AM294850-1|CAL26836.1| 192|Drosophila melanogaster CG9893 protein. 29 8.0
AM294848-1|CAL26834.1| 192|Drosophila melanogaster CG9893 protein. 29 8.0
AM294847-1|CAL26833.1| 192|Drosophila melanogaster CG9893 protein. 29 8.0
AM294846-1|CAL26832.1| 192|Drosophila melanogaster CG9893 protein. 29 8.0
AE013599-3529|AAF46944.1| 192|Drosophila melanogaster CG9893-PA... 29 8.0
>BT001846-1|AAN71607.1| 285|Drosophila melanogaster RH55218p
protein.
Length = 285
Score = 109 bits (262), Expect = 4e-24
Identities = 56/90 (62%), Positives = 62/90 (68%), Gaps = 7/90 (7%)
Frame = +2
Query: 2 QQRWFAVDPETGVLSYYLYDGP--GDTIQPG-----QPARGEAHLAAAVICPSDEDSKTF 160
Q RWF VD +TG LSYYL D GD I P RG+ LA AV+ PSDEDS+TF
Sbjct: 93 QYRWFTVDAKTGSLSYYLCDSSTVGDDIAPSPHVLASAPRGQVQLAGAVVYPSDEDSRTF 152
Query: 161 TINCASGDMLKLRATDARARQEWVDGLRAI 250
I CASGD +KLRA DARARQEWVDGLRA+
Sbjct: 153 AIACASGDTVKLRANDARARQEWVDGLRAV 182
Score = 80.2 bits (189), Expect = 2e-15
Identities = 48/82 (58%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Frame = +1
Query: 259 HTKVMGAN--PPLQPREQLAVHDAMAXARQQLQATELSDAALARCIESSD-SPFPHTDPD 429
H K M + PL PRE LA DAM ARQ L TE +A+LAR IES D + F TDPD
Sbjct: 186 HMKAMDISNSSPLPPRELLAASDAMVSARQALFLTEQCNASLARAIESIDCASFSPTDPD 245
Query: 430 LLLLKATSAASMQCLLQXLGVL 495
LLLLKA S AS QCL Q LG+L
Sbjct: 246 LLLLKAISTASTQCLHQCLGLL 267
>AY061117-1|AAL28665.1| 224|Drosophila melanogaster LD10220p
protein.
Length = 224
Score = 109 bits (262), Expect = 4e-24
Identities = 56/90 (62%), Positives = 62/90 (68%), Gaps = 7/90 (7%)
Frame = +2
Query: 2 QQRWFAVDPETGVLSYYLYDGP--GDTIQPG-----QPARGEAHLAAAVICPSDEDSKTF 160
Q RWF VD +TG LSYYL D GD I P RG+ LA AV+ PSDEDS+TF
Sbjct: 32 QYRWFTVDAKTGSLSYYLCDSSTVGDDIAPSPHVLASAPRGQVQLAGAVVYPSDEDSRTF 91
Query: 161 TINCASGDMLKLRATDARARQEWVDGLRAI 250
I CASGD +KLRA DARARQEWVDGLRA+
Sbjct: 92 AIACASGDTVKLRANDARARQEWVDGLRAV 121
Score = 80.2 bits (189), Expect = 2e-15
Identities = 48/82 (58%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Frame = +1
Query: 259 HTKVMGAN--PPLQPREQLAVHDAMAXARQQLQATELSDAALARCIESSD-SPFPHTDPD 429
H K M + PL PRE LA DAM ARQ L TE +A+LAR IES D + F TDPD
Sbjct: 125 HMKAMDISNSSPLPPRELLAASDAMVSARQALFLTEQCNASLARAIESIDCASFSPTDPD 184
Query: 430 LLLLKATSAASMQCLLQXLGVL 495
LLLLKA S AS QCL Q LG+L
Sbjct: 185 LLLLKAISTASTQCLHQCLGLL 206
>AE014296-171|AAN11458.1| 224|Drosophila melanogaster CG9205-PB,
isoform B protein.
Length = 224
Score = 109 bits (262), Expect = 4e-24
Identities = 56/90 (62%), Positives = 62/90 (68%), Gaps = 7/90 (7%)
Frame = +2
Query: 2 QQRWFAVDPETGVLSYYLYDGP--GDTIQPG-----QPARGEAHLAAAVICPSDEDSKTF 160
Q RWF VD +TG LSYYL D GD I P RG+ LA AV+ PSDEDS+TF
Sbjct: 32 QYRWFTVDAKTGSLSYYLCDSSTVGDDIAPSPHVLASAPRGQVQLAGAVVYPSDEDSRTF 91
Query: 161 TINCASGDMLKLRATDARARQEWVDGLRAI 250
I CASGD +KLRA DARARQEWVDGLRA+
Sbjct: 92 AIACASGDTVKLRANDARARQEWVDGLRAV 121
Score = 80.2 bits (189), Expect = 2e-15
Identities = 48/82 (58%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Frame = +1
Query: 259 HTKVMGAN--PPLQPREQLAVHDAMAXARQQLQATELSDAALARCIESSD-SPFPHTDPD 429
H K M + PL PRE LA DAM ARQ L TE +A+LAR IES D + F TDPD
Sbjct: 125 HMKAMDISNSSPLPPRELLAASDAMVSARQALFLTEQCNASLARAIESIDCASFSPTDPD 184
Query: 430 LLLLKATSAASMQCLLQXLGVL 495
LLLLKA S AS QCL Q LG+L
Sbjct: 185 LLLLKAISTASTQCLHQCLGLL 206
>AE014296-170|AAF47437.1| 224|Drosophila melanogaster CG9205-PA,
isoform A protein.
Length = 224
Score = 109 bits (262), Expect = 4e-24
Identities = 56/90 (62%), Positives = 62/90 (68%), Gaps = 7/90 (7%)
Frame = +2
Query: 2 QQRWFAVDPETGVLSYYLYDGP--GDTIQPG-----QPARGEAHLAAAVICPSDEDSKTF 160
Q RWF VD +TG LSYYL D GD I P RG+ LA AV+ PSDEDS+TF
Sbjct: 32 QYRWFTVDAKTGSLSYYLCDSSTVGDDIAPSPHVLASAPRGQVQLAGAVVYPSDEDSRTF 91
Query: 161 TINCASGDMLKLRATDARARQEWVDGLRAI 250
I CASGD +KLRA DARARQEWVDGLRA+
Sbjct: 92 AIACASGDTVKLRANDARARQEWVDGLRAV 121
Score = 80.2 bits (189), Expect = 2e-15
Identities = 48/82 (58%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Frame = +1
Query: 259 HTKVMGAN--PPLQPREQLAVHDAMAXARQQLQATELSDAALARCIESSD-SPFPHTDPD 429
H K M + PL PRE LA DAM ARQ L TE +A+LAR IES D + F TDPD
Sbjct: 125 HMKAMDISNSSPLPPRELLAASDAMVSARQALFLTEQCNASLARAIESIDCASFSPTDPD 184
Query: 430 LLLLKATSAASMQCLLQXLGVL 495
LLLLKA S AS QCL Q LG+L
Sbjct: 185 LLLLKAISTASTQCLHQCLGLL 206
>AE013599-961|AAF58878.3| 779|Drosophila melanogaster CG1513-PA
protein.
Length = 779
Score = 34.3 bits (75), Expect = 0.16
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = +2
Query: 2 QQRWFAVDPETGVLSYYLYDGPGDTIQPGQPARGEAHLAAAVICPSDEDSKTFTINCASG 181
Q R+F +D G+LSYY D + G RG L A+I D++ TFTI
Sbjct: 39 QYRFFVLDENAGLLSYYT---SKDKMIKG-VRRGCVRLKDALIGIDDQEDNTFTIT-VDH 93
Query: 182 DMLKLRATDARARQEWV 232
+A R++WV
Sbjct: 94 KTFHFQARHNEEREQWV 110
>AY052146-1|AAK93570.1| 1728|Drosophila melanogaster SD10541p protein.
Length = 1728
Score = 30.7 bits (66), Expect = 2.0
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +2
Query: 2 QQRWFAVDPETGVLSYYLYDGPGDTIQPG--QPARGEAHLAA--AVICPSDEDSKTFTIN 169
+QRWF +D L Y YD DT G + A ++ AA A I D K F
Sbjct: 1642 KQRWFVLDSIKHQLRY--YDTSEDTAPKGIIELAEVQSVTAAQPAQIGAKGVDEKGFFDL 1699
Query: 170 CASGDMLKLRATDARARQEWVDGLRA 247
S + A +A QEW++ L+A
Sbjct: 1700 KTSKRIYNFYAINANLAQEWIEKLQA 1725
>AF093637-1|AAC72365.1| 1750|Drosophila melanogaster SET domain
binding factor protein.
Length = 1750
Score = 30.7 bits (66), Expect = 2.0
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +2
Query: 2 QQRWFAVDPETGVLSYYLYDGPGDTIQPG--QPARGEAHLAA--AVICPSDEDSKTFTIN 169
+QRWF +D L Y YD DT G + A ++ AA A I D K F
Sbjct: 1664 KQRWFVLDSIKHQLRY--YDTSEDTAPKGIIELAEVQSVTAAQPAQIGAKGVDEKGFFDL 1721
Query: 170 CASGDMLKLRATDARARQEWVDGLRA 247
S + A +A QEW++ L+A
Sbjct: 1722 KTSKRIYNFYAINANLAQEWIEKLQA 1747
>AE014297-1382|AAF54700.3| 1993|Drosophila melanogaster CG6939-PA,
isoform A protein.
Length = 1993
Score = 30.7 bits (66), Expect = 2.0
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +2
Query: 2 QQRWFAVDPETGVLSYYLYDGPGDTIQPG--QPARGEAHLAA--AVICPSDEDSKTFTIN 169
+QRWF +D L Y YD DT G + A ++ AA A I D K F
Sbjct: 1907 KQRWFVLDSIKHQLRY--YDTSEDTAPKGIIELAEVQSVTAAQPAQIGAKGVDEKGFFDL 1964
Query: 170 CASGDMLKLRATDARARQEWVDGLRA 247
S + A +A QEW++ L+A
Sbjct: 1965 KTSKRIYNFYAINANLAQEWIEKLQA 1990
>AE014297-1381|AAN13531.2| 1973|Drosophila melanogaster CG6939-PB,
isoform B protein.
Length = 1973
Score = 30.7 bits (66), Expect = 2.0
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +2
Query: 2 QQRWFAVDPETGVLSYYLYDGPGDTIQPG--QPARGEAHLAA--AVICPSDEDSKTFTIN 169
+QRWF +D L Y YD DT G + A ++ AA A I D K F
Sbjct: 1887 KQRWFVLDSIKHQLRY--YDTSEDTAPKGIIELAEVQSVTAAQPAQIGAKGVDEKGFFDL 1944
Query: 170 CASGDMLKLRATDARARQEWVDGLRA 247
S + A +A QEW++ L+A
Sbjct: 1945 KTSKRIYNFYAINANLAQEWIEKLQA 1970
>X85331-1|CAA59680.1| 437|Drosophila melanogaster msh protein.
Length = 437
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Frame = -2
Query: 397 KTLCSARGP---RH*VRSLVAAAWPTPWRRGPRAALSAAGAGWPPSPWCVSSNGPEP 236
K+L S GP H ++++ A P P SA A WP W V G EP
Sbjct: 251 KSLESPHGPPPASHMQSTILSPAALAPSCAHPPDPFSALAARWPGREWAVEFRGQEP 307
>Z50097-2|CAB58233.1| 1080|Drosophila melanogaster headcase protein
protein.
Length = 1080
Score = 28.7 bits (61), Expect = 8.0
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -2
Query: 379 RGPRH*VRSLVAAAWPTPWRRGPRAALSAAGAGWPPSPWCVSSNGPEPVDPL 224
R P S+ +WP P R+G + + S AG+G SP S+G V P+
Sbjct: 286 RWPLSATSSIRTMSWPGPARQGWQLSSSGAGSG-STSPSDSQSSGEISVSPV 336
>Z50097-1|CAA90425.1| 649|Drosophila melanogaster hdc protein
protein.
Length = 649
Score = 28.7 bits (61), Expect = 8.0
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -2
Query: 379 RGPRH*VRSLVAAAWPTPWRRGPRAALSAAGAGWPPSPWCVSSNGPEPVDPL 224
R P S+ +WP P R+G + + S AG+G SP S+G V P+
Sbjct: 286 RWPLSATSSIRTMSWPGPARQGWQLSSSGAGSG-STSPSDSQSSGEISVSPV 336
>AY061216-1|AAL28764.1| 192|Drosophila melanogaster LD16285p
protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 TKVMGANPPLQPREQ-LAVHDAMAXARQQLQATELSDAALARCIESSDSPFPHTDPDLL 435
T+V+G P+Q E V DA+ A L AAL +C++ SD + DP+ L
Sbjct: 15 TRVLG---PVQDSEVGEGVVDALCSAHAILGEATTGSAALQQCVKRSDELEKYLDPNFL 70
>AM294857-1|CAL26843.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 TKVMGANPPLQPREQ-LAVHDAMAXARQQLQATELSDAALARCIESSDSPFPHTDPDLL 435
T+V+G P+Q E V DA+ A L AAL +C++ SD + DP+ L
Sbjct: 15 TRVLG---PVQDSEVGEGVVDALCSAHAILGEATTGSAALQQCVKRSDELEKYLDPNFL 70
>AM294856-1|CAL26842.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 TKVMGANPPLQPREQ-LAVHDAMAXARQQLQATELSDAALARCIESSDSPFPHTDPDLL 435
T+V+G P+Q E V DA+ A L AAL +C++ SD + DP+ L
Sbjct: 15 TRVLG---PVQDSEVGEGVVDALCSAHAILGEATTGSAALQQCVKRSDELEKYLDPNFL 70
>AM294855-1|CAL26841.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 TKVMGANPPLQPREQ-LAVHDAMAXARQQLQATELSDAALARCIESSDSPFPHTDPDLL 435
T+V+G P+Q E V DA+ A L AAL +C++ SD + DP+ L
Sbjct: 15 TRVLG---PVQDSEVGEGVVDALCSAHAILGEATTGSAALQQCVKRSDELEKYLDPNFL 70
>AM294854-1|CAL26840.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 TKVMGANPPLQPREQ-LAVHDAMAXARQQLQATELSDAALARCIESSDSPFPHTDPDLL 435
T+V+G P+Q E V DA+ A L AAL +C++ SD + DP+ L
Sbjct: 15 TRVLG---PVQDSEVGEGVVDALCSAHAILGEATTGSAALQQCVKRSDELEKYLDPNFL 70
>AM294853-1|CAL26839.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 TKVMGANPPLQPREQ-LAVHDAMAXARQQLQATELSDAALARCIESSDSPFPHTDPDLL 435
T+V+G P+Q E V DA+ A L AAL +C++ SD + DP+ L
Sbjct: 15 TRVLG---PVQDSEVGEGVVDALCSAHAILGEATTGSAALQQCVKRSDELEKYLDPNFL 70
>AM294852-1|CAL26838.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 TKVMGANPPLQPREQ-LAVHDAMAXARQQLQATELSDAALARCIESSDSPFPHTDPDLL 435
T+V+G P+Q E V DA+ A L AAL +C++ SD + DP+ L
Sbjct: 15 TRVLG---PVQDSEVGEGVVDALCSAHAILGEATTGSAALQQCVKRSDELEKYLDPNFL 70
>AM294851-1|CAL26837.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 TKVMGANPPLQPREQ-LAVHDAMAXARQQLQATELSDAALARCIESSDSPFPHTDPDLL 435
T+V+G P+Q E V DA+ A L AAL +C++ SD + DP+ L
Sbjct: 15 TRVLG---PVQDSEVGEGVVDALCSAHAILGEATTGSAALQQCVKRSDELEKYLDPNFL 70
>AM294850-1|CAL26836.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 TKVMGANPPLQPREQ-LAVHDAMAXARQQLQATELSDAALARCIESSDSPFPHTDPDLL 435
T+V+G P+Q E V DA+ A L AAL +C++ SD + DP+ L
Sbjct: 15 TRVLG---PVQDSEVGEGVVDALCSAHAILGEATTGSAALQQCVKRSDELEKYLDPNFL 70
>AM294848-1|CAL26834.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 TKVMGANPPLQPREQ-LAVHDAMAXARQQLQATELSDAALARCIESSDSPFPHTDPDLL 435
T+V+G P+Q E V DA+ A L AAL +C++ SD + DP+ L
Sbjct: 15 TRVLG---PVQDSEVGEGVVDALCSAHAILGEATTGSAALQQCVKRSDELEKYLDPNFL 70
>AM294847-1|CAL26833.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 TKVMGANPPLQPREQ-LAVHDAMAXARQQLQATELSDAALARCIESSDSPFPHTDPDLL 435
T+V+G P+Q E V DA+ A L AAL +C++ SD + DP+ L
Sbjct: 15 TRVLG---PVQDSEVGEGVVDALCSAHAILGEATTGSAALQQCVKRSDELEKYLDPNFL 70
>AM294846-1|CAL26832.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 TKVMGANPPLQPREQ-LAVHDAMAXARQQLQATELSDAALARCIESSDSPFPHTDPDLL 435
T+V+G P+Q E V DA+ A L AAL +C++ SD + DP+ L
Sbjct: 15 TRVLG---PVQDSEVGEGVVDALCSAHAILGEATTGSAALQQCVKRSDELEKYLDPNFL 70
>AE013599-3529|AAF46944.1| 192|Drosophila melanogaster CG9893-PA
protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 TKVMGANPPLQPREQ-LAVHDAMAXARQQLQATELSDAALARCIESSDSPFPHTDPDLL 435
T+V+G P+Q E V DA+ A L AAL +C++ SD + DP+ L
Sbjct: 15 TRVLG---PVQDSEVGEGVVDALCSAHAILGEATTGSAALQQCVKRSDELEKYLDPNFL 70
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,531,727
Number of Sequences: 53049
Number of extensions: 553870
Number of successful extensions: 2351
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2335
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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