BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0846 (499 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 69 8e-11 UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 67 2e-10 UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 51 1e-05 UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04 UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 40 0.023 UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 37 0.22 UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 34 1.5 UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 33 2.7 UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 33 4.7 UniRef50_Q0LMV2 Cluster: Putative uncharacterized protein; n=1; ... 32 8.2 >UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens (Human) Length = 146 Score = 68.5 bits (160), Expect = 8e-11 Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 5/144 (3%) Frame = +1 Query: 4 PIQAVQVFGRXKTATAVAYCKRGHGMLRVNGAPIGIXLXPXCCSTNFRNLSFCSXRXNSX 183 P+Q+VQVFGR KTATAVA+CKRG+G+++VNG P+ + + P + ++ L Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEM-IEPR--TLQYKLLEPVLLLGKER 62 Query: 184 WXXSE*QSRVVVMXH---XFTLSDKLFKGSDRLLPEICDEASKGDXRHPSTIXXXXAGXX 354 + + + RV H + + + K + DEASK + + + Sbjct: 63 FAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIK--DILIQYDRTLL 120 Query: 355 PAFXRAPES--FGGPGARARYXRS 420 A R ES FGGPGARARY +S Sbjct: 121 VADPRRCESKKFGGPGARARYQKS 144 Score = 41.1 bits (92), Expect = 0.013 Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 1/42 (2%) Frame = +2 Query: 248 SYSKALIAFYQKYVTK-PPRGIXDILVPYXXXXLVAXPRXFE 370 S SKAL+A+YQKYV + + I DIL+ Y LVA PR E Sbjct: 87 SISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCE 128 Score = 40.7 bits (91), Expect = 0.018 Identities = 21/49 (42%), Positives = 27/49 (55%) Frame = +3 Query: 114 VEXXLLQYKLQEPILLLXKXKFSMXXIRXXXXXXXXXXXXYAIRQAIQR 260 +E LQYKL EP+LLL K +F+ IR YAIRQ+I + Sbjct: 42 IEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISK 90 >UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep: Ribosomal protein S16 - Ixodes scapularis (Black-legged tick) (Deer tick) Length = 148 Score = 66.9 bits (156), Expect = 2e-10 Identities = 50/145 (34%), Positives = 72/145 (49%), Gaps = 5/145 (3%) Frame = +1 Query: 1 EPIQAVQVFGRXKTATAVAYCKRGHGMLRVNGAPIGIXLXPXCCSTNFRNLSFCSXRXNS 180 E IQ+VQV GR KTATAVAYCKRG+G+L+VNG P+ + P + ++ L Sbjct: 7 EAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLE-NIEP--LTLRYKLLEPILLLGKE 63 Query: 181 XWXXSE*QSRVV---VMXHXFTLSDKLFKGSDRLLPEICDEASKGDXRHPSTIXXXXAGX 351 + + + RV + + + + K + DE SK + + T+ Sbjct: 64 RFAGVDIRIRVKGGGNVAQIYAIRQAISKALVAYYQKYVDEQSKKEIK--DTLIQYDRTL 121 Query: 352 XPAFXR--APESFGGPGARARYXRS 420 A R P+ FGGPGARARY +S Sbjct: 122 LVADPRRCEPKKFGGPGARARYQKS 146 Score = 40.7 bits (91), Expect = 0.018 Identities = 22/49 (44%), Positives = 27/49 (55%) Frame = +3 Query: 114 VEXXLLQYKLQEPILLLXKXKFSMXXIRXXXXXXXXXXXXYAIRQAIQR 260 +E L+YKL EPILLL K +F+ IR YAIRQAI + Sbjct: 44 IEPLTLRYKLLEPILLLGKERFAGVDIRIRVKGGGNVAQIYAIRQAISK 92 Score = 37.9 bits (84), Expect = 0.13 Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +2 Query: 254 SKALIAFYQKYV-TKPPRGIXDILVPYXXXXLVAXPRXFE 370 SKAL+A+YQKYV + + I D L+ Y LVA PR E Sbjct: 91 SKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVADPRRCE 130 >UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces cerevisiae (Baker's yeast) Length = 143 Score = 51.2 bits (117), Expect = 1e-05 Identities = 36/138 (26%), Positives = 60/138 (43%) Frame = +1 Query: 7 IQAVQVFGRXKTATAVAYCKRGHGMLRVNGAPIGIXLXPXCCSTNFRNLSFCSXRXNSXW 186 + +VQ FG+ K+ATAVA+ K G G+++VNG+PI + + L S Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63 Query: 187 XXSE*QSRVVVMXHXFTLSDKLFKGSDRLLPEICDEASKGDXRHPSTIXXXXAGXXPAFX 366 + + + + + KG + DE SK + + T + Sbjct: 64 DIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRR 123 Query: 367 RAPESFGGPGARARYXRS 420 P+ FGG GAR+R+ +S Sbjct: 124 PEPKKFGGKGARSRFQKS 141 Score = 37.9 bits (84), Expect = 0.13 Identities = 21/55 (38%), Positives = 29/55 (52%) Frame = +3 Query: 96 GAHWNXVEXXLLQYKLQEPILLLXKXKFSMXXIRXXXXXXXXXXXXYAIRQAIQR 260 G+ VE +L++K+ EP+LL+ KFS IR YAIRQAI + Sbjct: 33 GSPITLVEPEILRFKVYEPLLLVGLDKFSNIDIRVRVTGGGHVSQVYAIRQAIAK 87 >UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; Ustilago maydis|Rep: Putative uncharacterized protein - Ustilago maydis (Smut fungus) Length = 199 Score = 48.0 bits (109), Expect = 1e-04 Identities = 19/33 (57%), Positives = 26/33 (78%) Frame = +1 Query: 13 AVQVFGRXKTATAVAYCKRGHGMLRVNGAPIGI 111 +V FG+ KTATAVA+CK G G++R+NG PI + Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISL 37 >UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; Oryza sativa (japonica cultivar-group)|Rep: Putative uncharacterized protein - Oryza sativa subsp. japonica (Rice) Length = 61 Score = 40.3 bits (90), Expect = 0.023 Identities = 17/29 (58%), Positives = 21/29 (72%) Frame = +1 Query: 4 PIQAVQVFGRXKTATAVAYCKRGHGMLRV 90 P VQ FGR KTA AV+YCK G G+++V Sbjct: 9 PPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37 >UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella natans|Rep: Ribosomal protein S16 - Bigelowiella natans (Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP 621)) Length = 139 Score = 37.1 bits (82), Expect = 0.22 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = +1 Query: 16 VQVFGRXKTATAVAYCKRGHGMLRVNGAPIGI 111 +Q FG+ K A A+ K+G G +++NG PI + Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINL 34 >UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus horikoshii Length = 135 Score = 34.3 bits (75), Expect = 1.5 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +1 Query: 7 IQAVQVFGRXKTATAVAYCKRGHGMLRVNGAPIGI 111 ++ +Q G+ KTA A A + G G +R+NG P+ I Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEI 35 >UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16 - Encephalitozoon cuniculi Length = 145 Score = 33.5 bits (73), Expect = 2.7 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = +1 Query: 367 RAPESFGGPGARARYXRS 420 R P+ FGGPGARARY +S Sbjct: 126 REPKKFGGPGARARYQKS 143 >UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2; Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089, moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo sapiens (Human) Length = 178 Score = 32.7 bits (71), Expect = 4.7 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +1 Query: 7 IQAVQVFGRXKTATAVAYCKRGHGMLRVNGAPI 105 +Q+VQ+F + A AV C+ G G +R+N P+ Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPL 50 >UniRef50_Q0LMV2 Cluster: Putative uncharacterized protein; n=1; Herpetosiphon aurantiacus ATCC 23779|Rep: Putative uncharacterized protein - Herpetosiphon aurantiacus ATCC 23779 Length = 95 Score = 31.9 bits (69), Expect = 8.2 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = +3 Query: 39 NRHRSCVLQAWSWNAACKRGAHWNXVEXXLLQYKLQEPIL 158 N H+ +L + W+ C+ AHWN + ++ EP+L Sbjct: 35 NNHQVQLLASGEWHCDCEFFAHWNTCSHVMALQRILEPML 74 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 396,124,321 Number of Sequences: 1657284 Number of extensions: 5862883 Number of successful extensions: 11382 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 11168 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11381 length of database: 575,637,011 effective HSP length: 95 effective length of database: 418,195,031 effective search space used: 29273652170 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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