Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0846
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...    74   1e-13
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...    74   1e-13
AY089269-1|AAL90007.1|  293|Drosophila melanogaster AT06885p pro...    28   8.1  
AE014297-29|AAF52157.2|  293|Drosophila melanogaster CG14644-PA ...    28   8.1  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 50/143 (34%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
 Frame = +1

Query: 1   EPIQAVQVFGRXKTATAVAYCKRGHGMLRVNGAPIGIXLXPXCCSTNFRNLSFCSXRXNS 180
           EP+QAVQVFGR KTATAVAYCKRG+G+L+VNG P+   + P       +       +   
Sbjct: 7   EPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLE-QIEPKVLQYKLQEPLLLLGK--E 63

Query: 181 XWXXSE*QSRVVVMXH---XFTLSDKLFKGSDRLLPEICDEASKGDXRHPSTIXXXXAGX 351
            +   + + RV    H    + +   + K       +  DEASK + +            
Sbjct: 64  KFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLV 123

Query: 352 XPAFXRAPESFGGPGARARYXRS 420
                  P+ FGGPGARARY +S
Sbjct: 124 GDPRRCEPKKFGGPGARARYQKS 146



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 24/49 (48%), Positives = 29/49 (59%)
 Frame = +3

Query: 114 VEXXLLQYKLQEPILLLXKXKFSMXXIRXXXXXXXXXXXXYAIRQAIQR 260
           +E  +LQYKLQEP+LLL K KF+   IR            YAIRQAI +
Sbjct: 44  IEPKVLQYKLQEPLLLLGKEKFAGVDIRVRVSGGGHVAQIYAIRQAISK 92



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 22/40 (55%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 254 SKALIAFYQKYVTK-PPRGIXDILVPYXXXXLVAXPRXFE 370
           SKAL+AFYQKYV +   + I DILV Y    LV  PR  E
Sbjct: 91  SKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCE 130


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 50/143 (34%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
 Frame = +1

Query: 1   EPIQAVQVFGRXKTATAVAYCKRGHGMLRVNGAPIGIXLXPXCCSTNFRNLSFCSXRXNS 180
           EP+QAVQVFGR KTATAVAYCKRG+G+L+VNG P+   + P       +       +   
Sbjct: 7   EPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLE-QIEPKVLQYKLQEPLLLLGK--E 63

Query: 181 XWXXSE*QSRVVVMXH---XFTLSDKLFKGSDRLLPEICDEASKGDXRHPSTIXXXXAGX 351
            +   + + RV    H    + +   + K       +  DEASK + +            
Sbjct: 64  KFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLV 123

Query: 352 XPAFXRAPESFGGPGARARYXRS 420
                  P+ FGGPGARARY +S
Sbjct: 124 GDPRRCEPKKFGGPGARARYQKS 146



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 24/49 (48%), Positives = 29/49 (59%)
 Frame = +3

Query: 114 VEXXLLQYKLQEPILLLXKXKFSMXXIRXXXXXXXXXXXXYAIRQAIQR 260
           +E  +LQYKLQEP+LLL K KF+   IR            YAIRQAI +
Sbjct: 44  IEPKVLQYKLQEPLLLLGKEKFAGVDIRVRVSGGGHVAQIYAIRQAISK 92



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 22/40 (55%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 254 SKALIAFYQKYVTK-PPRGIXDILVPYXXXXLVAXPRXFE 370
           SKAL+AFYQKYV +   + I DILV Y    LV  PR  E
Sbjct: 91  SKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCE 130


>AY089269-1|AAL90007.1|  293|Drosophila melanogaster AT06885p
           protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +2

Query: 215 WSCXTSLRYQTSYSKALIAFYQKYVTKPPRGIXDI-LVP 328
           WS    LR  + Y +A+I    +   KPPRG   I LVP
Sbjct: 60  WSLFCCLRVMSEYERAVILRLGRLRPKPPRGPGVIFLVP 98


>AE014297-29|AAF52157.2|  293|Drosophila melanogaster CG14644-PA
           protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +2

Query: 215 WSCXTSLRYQTSYSKALIAFYQKYVTKPPRGIXDI-LVP 328
           WS    LR  + Y +A+I    +   KPPRG   I LVP
Sbjct: 60  WSLFCCLRVMSEYERAVILRLGRLRPKPPRGPGVIFLVP 98


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,097,300
Number of Sequences: 53049
Number of extensions: 275309
Number of successful extensions: 550
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)