Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0840
         (299 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB731B Cluster: PREDICTED: similar to CG4420-PA;...    58   5e-08
UniRef50_A7S5W6 Cluster: Predicted protein; n=1; Nematostella ve...    49   2e-05
UniRef50_Q9VXF9 Cluster: CG4420-PA; n=2; Sophophora|Rep: CG4420-...    45   4e-04
UniRef50_Q6CFI3 Cluster: DNA damage-inducible protein 1; n=1; Ya...    38   0.058
UniRef50_Q5TDH0 Cluster: DDI1 homolog 2; n=41; Coelomata|Rep: DD...    36   0.24 
UniRef50_Q4PEX0 Cluster: Putative uncharacterized protein; n=1; ...    32   2.9  
UniRef50_UPI0000499807 Cluster: UV excision repair protein RAD23...    31   6.7  
UniRef50_Q8LF25 Cluster: DNA-damage inducible protein DDI1-like;...    30   8.9  

>UniRef50_UPI0000DB731B Cluster: PREDICTED: similar to CG4420-PA;
           n=3; Endopterygota|Rep: PREDICTED: similar to CG4420-PA
           - Apis mellifera
          Length = 465

 Score = 57.6 bits (133), Expect = 5e-08
 Identities = 27/45 (60%), Positives = 32/45 (71%)
 Frame = +1

Query: 118 MKVTVTTLNDXIFVLDVSXDLELXXFKAFCEIXSGFPAKDITLHF 252
           MKVTVTTL+D IFVLDV  D+EL  FKA CEI S  P  ++ + F
Sbjct: 1   MKVTVTTLSDDIFVLDVIEDMELESFKALCEIESNVPVHEMVIAF 45


>UniRef50_A7S5W6 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 246

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 24/44 (54%), Positives = 30/44 (68%)
 Frame = +1

Query: 118 MKVTVTTLNDXIFVLDVSXDLELXXFKAFCEIXSGFPAKDITLH 249
           MKVTVT  +  IF LDVS DLE+  F+A  E  SG PA +I+L+
Sbjct: 1   MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLY 44


>UniRef50_Q9VXF9 Cluster: CG4420-PA; n=2; Sophophora|Rep: CG4420-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 458

 Score = 44.8 bits (101), Expect = 4e-04
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = +1

Query: 118 MKVTVTTLNDXIFVLDVSXDLELXXFKAFCEIXSGFPAKDITLHF 252
           MK+TVTT +D +F LDV+ DLEL   KA C +  G     I + F
Sbjct: 1   MKITVTTSDDKVFCLDVAQDLELENLKALCAMEIGAEVSQIAVIF 45


>UniRef50_Q6CFI3 Cluster: DNA damage-inducible protein 1; n=1;
           Yarrowia lipolytica|Rep: DNA damage-inducible protein 1
           - Yarrowia lipolytica (Candida lipolytica)
          Length = 397

 Score = 37.5 bits (83), Expect = 0.058
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +1

Query: 118 MKVTVTTLNDXIFVLDVSXDLELXXFKAFCEIXSGFPAKDITLHFKAN 261
           M++ VTT ++ +F L+V+ D+      AF E+ +  P+KDI L    N
Sbjct: 1   MQIFVTTPSENVFGLEVAADMAYEDLLAFVEMEASVPSKDIILSLNGN 48


>UniRef50_Q5TDH0 Cluster: DDI1 homolog 2; n=41; Coelomata|Rep: DDI1
           homolog 2 - Homo sapiens (Human)
          Length = 399

 Score = 35.5 bits (78), Expect = 0.24
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 139 LNDXIFVLDVSXDLELXXFKAFCEIXSGFPAKD 237
           L++  F L V  D EL  F+A CE+ SG PA +
Sbjct: 12  LSEVTFSLQVDADFELHNFRALCELESGIPAAE 44


>UniRef50_Q4PEX0 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 462

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 124 VTVTTLNDXIFVLDVSXDLELXXFKAFCEIXSGFPA 231
           +TV T +D  F +DV   +E+   +A  E+ S  PA
Sbjct: 2   ITVITEDDRTFAIDVDASIEIENLRALLEVDSNIPA 37


>UniRef50_UPI0000499807 Cluster: UV excision repair protein RAD23;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: UV excision
           repair protein RAD23 - Entamoeba histolytica HM-1:IMSS
          Length = 360

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +1

Query: 118 MKVTVTTLNDXIFVLDVSXDLELXXFKAFCEIXSGFPAKDITLHFKA 258
           MK+TVTT++  +F  DV     +   K       G     I L FK+
Sbjct: 1   MKITVTTISKKLFTFDVEPTSTIGYLKELISKQEGIEISSIALCFKS 47


>UniRef50_Q8LF25 Cluster: DNA-damage inducible protein DDI1-like;
           n=7; Magnoliophyta|Rep: DNA-damage inducible protein
           DDI1-like - Arabidopsis thaliana (Mouse-ear cress)
          Length = 414

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 118 MKVTVTTLNDXIFVLDVSXDLELXXFKAFCEIXSGFPAKDITLHFKAN 261
           M++TV T  + I  LDV     +   KA  E+ S  P +   L +  N
Sbjct: 1   MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGN 48


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,905,276
Number of Sequences: 1657284
Number of extensions: 2623970
Number of successful extensions: 4213
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4213
length of database: 575,637,011
effective HSP length: 76
effective length of database: 449,683,427
effective search space used: 10342718821
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)