Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0840
         (299 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57...    25   8.3  

>07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-571542,
            571635-571885,572018-572128,572209-572320,572626-572716,
            573168-573507,573678-573900,573946-574204,574274-574481,
            574572-574622,574712-574870,574956-575120,575322-575399,
            575732-576031,576107-576259,576871-576918,577019-577188,
            577738-577852,578462-578623,578789-578893,578969-579199,
            579277-579410,579484-579738,579822-580110,580214-580306,
            580395-580520,580646-580897
          Length = 1693

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 82   CRGSIALYLLIKFQXHFXKTV 20
            C G+IAL LL+K + H  KTV
Sbjct: 1540 CHGAIALQLLLKLKRHL-KTV 1559


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,318,400
Number of Sequences: 37544
Number of extensions: 65782
Number of successful extensions: 104
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)