Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0840
         (299 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    20   5.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   5.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    20   5.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   5.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   5.7  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    20   7.6  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 87  VIYWVYPKIHDESNSN 134
           ++Y VYP+   +SN +
Sbjct: 31  IVYQVYPRSFKDSNGD 46


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = -1

Query: 119 IVNFWINPINNTV 81
           +++FW++ +NN V
Sbjct: 492 LIDFWVSFVNNGV 504


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 87  VIYWVYPKIHDESNSN 134
           ++Y VYP+   +SN +
Sbjct: 31  IVYQVYPRSFKDSNGD 46


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 81  HCVIYWVYPKIHDESNSN 134
           + + Y VYP+   +SNS+
Sbjct: 27  NAIFYQVYPRSFMDSNSD 44


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = -1

Query: 119 IVNFWINPINNTV 81
           +++FW++ +NN V
Sbjct: 492 LIDFWVSFVNNGV 504


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 85  VLFIGFIQKFTMKVTVTTLN 144
           VLF   +  F++ VTV  LN
Sbjct: 307 VLFTMILDTFSICVTVVVLN 326


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,343
Number of Sequences: 438
Number of extensions: 835
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6244050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)