Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0838
         (648 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      92   5e-21
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          81   9e-18
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      34   0.001
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              27   0.16 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   1.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   5.9  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 91.9 bits (218), Expect = 5e-21
 Identities = 39/74 (52%), Positives = 55/74 (74%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 427
           +  H++VLS CSPYF+E+ K  P +HP++ L+DV+ S L  L++F+Y GEVNV Q  L+S
Sbjct: 43  LKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLSS 102

Query: 428 FISTAEQLQVKGLT 469
           F+ TAE L+V GLT
Sbjct: 103 FLKTAEVLRVSGLT 116



 Score = 33.1 bits (72), Expect = 0.002
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 124 MASXXQFXLCWXNFHANMSAGFHGLLSRGDLVDVTLAAE 240
           M     F L W N+ +++++ F  L    D VDVTLA +
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACD 39


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 81.0 bits (191), Expect = 9e-18
 Identities = 37/97 (38%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFKMNPTQHPIVFL-KDVSHSALRDLLQFMYQGEVNVKQEELA 424
           +  HK+VLS CS YFQ++   NP +HP + + +DV  + L+ +++F+Y+GE++V Q EL 
Sbjct: 47  LKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQ 106

Query: 425 SFISTAEQLQVKGLTGNXNEESSTPSKPSRLXGQAPG 535
           S + TA+QL++KGL          PS       + PG
Sbjct: 107 SLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPG 143



 Score = 34.3 bits (75), Expect = 0.001
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +1

Query: 142 FXLCWXNFHANMSAGFHGLLSRGDLVDVTLA 234
           + L W N+ +NM++ FH LL     VDVTLA
Sbjct: 11  YCLRWNNYQSNMTSVFHQLLQTEAFVDVTLA 41


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 34.3 bits (75), Expect = 0.001
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 124 MASXXQFXLCWXNFHANMSAGFHGLLSRGDLVDVTLAAE 240
           M     F L W N+ +++++ F  L    D VDVTLA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 371 LLQFMYQGEVNVKQEELASFIS-TAEQLQVKGLTGNXNEESS 493
           ++  +Y G VNV+ E + S++    ++  V    GN NE+++
Sbjct: 43  IIDEVYNGNVNVEDENVQSYVECMMKKFNVVDENGNFNEKNT 84


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 489 LSSX*LPVKPLT*SCSAVLINDANSSCLTLTSP 391
           LSS      P+T + S ++ N  NS+C    SP
Sbjct: 323 LSSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSP 355


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +1

Query: 121 IMASXXQFXLCWXNFHANMSAGFHGLLSRGDLVDVTL 231
           ++A    F +CW  FHA      +   S+    DV +
Sbjct: 287 LVAVVVAFFICWAPFHAQRLLAVYAQNSKDKPEDVLI 323


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -2

Query: 551 CLCCDDL-GPG 522
           C CCD+L GPG
Sbjct: 13  CWCCDNLGGPG 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,972
Number of Sequences: 438
Number of extensions: 2385
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)