Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0837
         (528 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    25   0.63 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    25   0.63 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    25   0.63 
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   1.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   3.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   3.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   3.4  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 274 IFIRPWNESSLVLHHWLTGLNSCIL 200
           I + P+N + L+L  W+ G++ C L
Sbjct: 87  ILVMPFNVAYLLLGKWIFGIHLCKL 111


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 274 IFIRPWNESSLVLHHWLTGLNSCIL 200
           I + P+N + L+L  W+ G++ C L
Sbjct: 87  ILVMPFNVAYLLLGKWIFGIHLCKL 111


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 274 IFIRPWNESSLVLHHWLTGLNSCIL 200
           I + P+N + L+L  W+ G++ C L
Sbjct: 87  ILVMPFNVAYLLLGKWIFGIHLCKL 111


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 506 LTIVW*LSKLSSRPCATS-XXIRRILCSPSXIFKHVPHDGMRYATIVVTHSD 354
           LT++W  S+ + R  A S   I  ILC  S +   +PH+      I++ + D
Sbjct: 271 LTVLWLDSRSTERMIAASVNLICHILCM-SDLHWQLPHNSTNPPNILLYYRD 321


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 410 KHVPHDGMRYATIVVTHSDV 351
           K  PH   RY  + V H D+
Sbjct: 114 KEEPHAPYRYEAVAVIHKDL 133


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 410 KHVPHDGMRYATIVVTHSDV 351
           K  PH   RY  + V H D+
Sbjct: 114 KEEPHAPYRYEAVAVIHKDL 133


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 410 KHVPHDGMRYATIVVTHSDV 351
           K  PH   RY  + V H D+
Sbjct: 114 KEEPHAPYRYEAVAVIHKDL 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,120
Number of Sequences: 438
Number of extensions: 3303
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)